Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06318 ATGTCTTTCAACATCAACAAGAAGAAAAAGTTCTTCAGAACACTCTTTTCATCTAACAAAAGTTGCGGTTGCCTCAAAATAAAACCCTCTAATGTCCTTGAGCCCTCCCTAAAACCTAAAATCTCTATCTACCAAAATCAAAACAAAAACCCTAGTGGCGCCACTTCCTCCGCCTCCACCGCCGACGATGATGATAAAGTTTTGGCTTCCAGTCCGGTCTGTGAAGCCAAAACTACTCATCACAACAACAATACAATTTTAAATTCAGGTACAAAACTCGTCGATAGCATTGCCATTGAGAAAGAGTCTGAGGATCCATACTATGATTTCCGAAACTCGATACTTCAAATGATATTGGAGAGAAAGATCTACGCGGAGAAAGATCTTGAAGAGCTTCTTGAATGTTTTCTTCAGCTTAATGCGAAGTGTCACCACCAAGTCATTGTTGAAGCGTTCATGGAGATATGTGAAGAAATATTCCCTAAGAAGCTTCAAGGTGAAGGTGAAGAGTCTCAAAGGAATAATCAAATTACTGGAAAGAGTTAG 546 0.3956 MSFNINKKKKFFRTLFSSNKSCGCLKIKPSNVLEPSLKPKISIYQNQNKNPSGATSSASTADDDDKVLASSPVCEAKTTHHNNNTILNSGTKLVDSIAIEKESEDPYYDFRNSILQMILERKIYAEKDLEELLECFLQLNAKCHHQVIVEAFMEICEEIFPKKLQGEGEESQRNNQITGKS 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06318 181 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 60 160 IPR038933 GO:0045892
Vivi2g06318 181 ProSiteProfiles OVATE domain profile. 99 158 IPR006458 -
Vivi2g06318 181 MobiDBLite consensus disorder prediction 44 65 - -
Vivi2g06318 181 Pfam Transcriptional repressor, ovate 103 160 IPR006458 -
Vivi2g06318 181 NCBIfam uncharacterized plant-specific domain TIGR01568 97 158 IPR006458 -
Vivi2g06318 181 MobiDBLite consensus disorder prediction 44 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06318 Vivi-Chr2 198221459 198222450 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vivi2g06318 Ovate 4.2e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06318 - - vvo:131647877 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06318 2 198221459 198222450 Vivi2g06318 2 198221459 198222450 ECH