LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi2g06306	ATGATGATAAGGTTTAAAATAAAGAAACAAGTTGTATTGATATACTACTTATGGGTATGGTGGAGTACTTGTATTTGTGTTAAAGCAGGAAATGATAGTTTGAAGGCGGGTGAAAGATTGGTTGCCAACTCCAGTCTATGGTCTAAGCAAGGCAGGTATTATCTATCATTCGATAGAACAATAGAGAGTGGAGAAAATTATAATTACTTGGTTATAGTAAGTAAGAATTATTTTGGTGATCGAGGATCAGTAATATGGATGTATGATAGAAACCATCCAATTGATATTAGTTCAGCGGTTTTATCTCTAAACTACTCTGGTGTGCTCAAAATTGAATTTCAATATAAGAAAGAAATAATCATTTACTCTTCACCTCAACCTATAAACAATACTGTGGCTACTATGCTAGACACAGGTAACTTTGTACTTGAACAACTTCACCCCAATGGAACTAAGAGTTTATTGTGGCAGAGTTTTGATTATCCATCATACACATTGGTCCCTAAGATGAAGTTAGGTGCTAACCGAAAAACTGGACATAATTGGTCATTAGTTTCTTGGTTGAGTCATTCGGTACCAACTTTGGGTGAGTTTAGTCTTGAATGGGAACCAAAAGAAGGTGAATTGAACATTAAAAGACACGGGAAAGTGTATTGGAAAAGCGGAAAACTTGGAAATAATGGATTGTTCGACAATATTCCAGCAAATGTTCAACAAAATTATCAGTACATTGTTATCTCTAACAAGGATGAAGATTCTTTCAGCTTCGAAATTAAAGACCAAAATTATAAGATGTTTCCAGAGTGGTTTCTATCCACTGAGGGGAGGCTCTCGAGTTCGGAAGGAGAGTTAGGAAATGCAGATATTTGTTATGGATATAATAGTGACAGAGGATGCCAAAAATGGGAGGATATACCAACTTGCAGGAAGCCTGGTGAGGTGTTTGAGATAAAGATAGGCAGACCCAACAGTGATTATGCTATCTTCCAAGAGAATGCGAGTTATATTTACAATGATTGCAAGATGATTTGTTGGAGAAACTGTAGTTGCAATGGATTCCGCAAATATTATGGTAATGGAACTGGATGTATATTTTATTCATGGAATTCTACACAAGATGTTGATCTGGAGGATGACTTTAAATTTTACATATTGGGAATGCCAAATCACAAGGGTCAAAGAAGGTGGATATGGATAAGTGCAGCAATAGCAGCTGCTATACTTATAATATGCCCACTCATTCTATGCATAGCCATAAAGAAACACAAATATGGACTTAAAGGGAAGAAAGTTAAAAGAAAGGAGAAAGAGATGCAAGAGCTGGCCGCTTCCAATGAATTATATAGTATCAAAGATCTTGAAGATGATTTCAAAGGACATGATATAAAAGTTTTTAGCTATGCATCAATTTTAGAAGCAACCATGGACTTTTCCCCGGAAAACAAGTTAGGACAGGGAGGCTATGGACCCGTTTATAAGGGAATCTTGACAACCGGGCAAGAAGTTGCTGTAAAAAGACTTTCAAAAACTTCTGGACAAGGAATTGTTGAATTCAAAAATGAATTGGTCTTGATATGTGAACTTCAACACACAAATCTTGTACAACTACTTGGTTGTTGTATTTATGAAGAAGAAAGGATTCTAATTTACGAATATATGCCAAACAAAAGCTTGGATTTCTATCTATTCGATTCTACAAGAAGGAAGTTACTTGATTGGAAGAAGCGCTTCAACATTATAGAAGGAATTTCTCAGGCATTACTTTATCTTCATAAATATTCAAGACTAAAAATCATTCATAGAGACTTGAAAGCAAGCAACATACTTCTTGATGAGAATATGAATCCAAAAATTTCTGATTTTGGCATGGCAAGAATGTTCACACAGCAGGAATCAACGATAAATACCAACAGGATTGTCGGGACATATGGATACATGTCTCCAGAATATGCTATGGAAGGAATTTGTTCTACAAAGTCCGATGTCTATAGCTTTGGAGTGTTGCTACTTGAAATTGTTTGTGGAAGAAAAAACAATAGCTTCTACGATGTTGATGGTCCTTTAAACCTAATAGGACATGCATGGGAGCTATGGAATGATGGGGAGTATATGCAGTTAATGGATCCATCATTAAGTGACTCATTTGTTCCTGATGAAGTGAATAGGTGCATTCATGTTGGTCTCTTATGTGTACAGCAATATGCAAATGATCGACCTACAATGTCTGATGTTATATCAATGTTGACAAACAATCATGAACACATTACTTTACCGACAAGACCAGCATTCTATGTTAGAAAAGATATCTTTGAGGAGGAAACAACTTCTAAAGTTCTGGACACTGACACTTATTCTATAACTGGAAATTCCTCTTCGGGTGTAGAAAGGAAATAA	2394	0.358	MMIRFKIKKQVVLIYYLWVWWSTCICVKAGNDSLKAGERLVANSSLWSKQGRYYLSFDRTIESGENYNYLVIVSKNYFGDRGSVIWMYDRNHPIDISSAVLSLNYSGVLKIEFQYKKEIIIYSSPQPINNTVATMLDTGNFVLEQLHPNGTKSLLWQSFDYPSYTLVPKMKLGANRKTGHNWSLVSWLSHSVPTLGEFSLEWEPKEGELNIKRHGKVYWKSGKLGNNGLFDNIPANVQQNYQYIVISNKDEDSFSFEIKDQNYKMFPEWFLSTEGRLSSSEGELGNADICYGYNSDRGCQKWEDIPTCRKPGEVFEIKIGRPNSDYAIFQENASYIYNDCKMICWRNCSCNGFRKYYGNGTGCIFYSWNSTQDVDLEDDFKFYILGMPNHKGQRRWIWISAAIAAAILIICPLILCIAIKKHKYGLKGKKVKRKEKEMQELAASNELYSIKDLEDDFKGHDIKVFSYASILEATMDFSPENKLGQGGYGPVYKGILTTGQEVAVKRLSKTSGQGIVEFKNELVLICELQHTNLVQLLGCCIYEEERILIYEYMPNKSLDFYLFDSTRRKLLDWKKRFNIIEGISQALLYLHKYSRLKIIHRDLKASNILLDENMNPKISDFGMARMFTQQESTINTNRIVGTYGYMSPEYAMEGICSTKSDVYSFGVLLLEIVCGRKNNSFYDVDGPLNLIGHAWELWNDGEYMQLMDPSLSDSFVPDEVNRCIHVGLLCVQQYANDRPTMSDVISMLTNNHEHITLPTRPAFYVRKDIFEEETTSKVLDTDTYSITGNSSSGVERK	797

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi2g06306	797	Gene3D	Transferase(Phosphotransferase) domain 1	553	760	-	-
	Vivi2g06306	797	Gene3D	-	25	159	IPR036426	-
	Vivi2g06306	797	PIRSF	SRK	4	290	IPR024171	GO:0004674
	Vivi2g06306	797	PIRSF	SRK	286	795	IPR024171	GO:0004674
	Vivi2g06306	797	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	598	610	IPR008271	GO:0004672\|GO:0006468
	Vivi2g06306	797	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230	442	552	-	-
	Vivi2g06306	797	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	553	756	-	-
	Vivi2g06306	797	CDD	STKc_IRAK	483	750	-	-
	Vivi2g06306	797	Coils	Coil	431	451	-	-
	Vivi2g06306	797	ProSiteProfiles	Protein kinase domain profile.	477	755	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vivi2g06306	797	SUPERFAMILY	alpha-D-mannose-specific plant lectins	84	190	IPR036426	-
	Vivi2g06306	797	Gene3D	Phosphorylase Kinase; domain 1	427	552	-	-
	Vivi2g06306	797	ProSiteProfiles	Bulb-type lectin domain profile.	31	156	IPR001480	-
	Vivi2g06306	797	SUPERFAMILY	Protein kinase-like (PK-like)	462	769	IPR011009	-
	Vivi2g06306	797	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	134	773	-	-
	Vivi2g06306	797	SMART	blect_4	31	162	IPR001480	-
	Vivi2g06306	797	SMART	serkin_6	477	755	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vivi2g06306	797	Pfam	D-mannose binding lectin	84	187	IPR001480	-
	Vivi2g06306	797	Pfam	Protein tyrosine and serine/threonine kinase	480	747	IPR001245	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi2g06306	Vivi-Chr2	198081389	198088011	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi2g06306	413	787	Receptor kinase-like Gene Family	AT3G45860	50.130	2.84e-123	384

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Vivi2g06306		PK_Tyr_Ser-Thr	5.1e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi2g06306	-		-	vvo:131653519	1439.09