Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06298 ATGAGGACCTATAAATCACTTGTATCAAGCTTCCTATCCAGATTTGATATGATTCTCCTACATGTTTGGTTTAAAACAAGGAAACAAGCTGTATTGACATACTACTTCTGGGTGTGGTGGACTACAAGTATCTGTGTTGAAGCAGGAAATGATAGTTTGAAGGCAGGTGAAAGATTGGTTGCCAAATCCAATCTATGCTCTAAGCAAGGCAGTTATTGTCTATCATTCGATGGAACATTAGATAGCAAAAGTAATTATTATTACTTGGTTATTGAAAGAATGAATAACTTTGGTGGTCGAGCCTCAGTAGTATGGATGTATGATAGAAATCATCCAGTTGATATTAATTCAGCGGTTTTATCTCTAAACTACTCCGGTGTGCTCAAAATTGAATTTCAATATAGAAAAGAAATAATCATTTACTCTTCACCTCAACCTATAAACAATACTGTGGCTACTATGCTAGACACAGGTAACTTTGTACTTGAACAACTTCACCCCAATGGAACTAAGACTTTATTGTGGCAGAGTTTTGATTATCCAGCAGATATTTTGATCCCAGCGATGAAGTTAGGTGTTAATCGAAAAACTGGACATAATTGGTCTCTAGTTTCGTGGTTGACTCCTTCGCTGCCATATTTGGGTGAATTTAGTCTTGAATGGGATCCAAAAGAAGAAGAATTGAACATTAAGAAACGCGGGAAAGTGTATTGGAAAAGCGGAAAACTTGTAAATAATGGATTGTTCGACAATATTCCAGCAAATGTTCAACAAAATTATCAATACGTTATTATCTCTAACAAGGATGAAGATTCTTTCAGTTTCGAAATTAAAGATCGGAACTCTAAGATGCTTACAGAATGGGCACTCTTCTCTGATGGGAGGTTTGTGAGTTTGGAAGGAGAGTTGGGTAATGCAGATATTTGTTATGGATATAACAGTGACGGAGGTTGCCAAAAATGGGAGGATATACCAACTTGTAGGAAGCCTGGTGAGGTGTTTGAGATAAAGATAGGCAGACCTAACACTGACTATGCTATCCTCCAAGACAATGTGAGTTATGGTTACAGTGATTGCAAGATGAGTTGTTGGAGAAACTGTGGTTGCAATGGATTCCAAGAATATTCTGATAATGGAACTGGATGTATATTTTATCCATGGAATTCTACTCAAGAAGTTGATTCGGAGAGTGTGAATAGGTTCTACATGTTAGAAAAGCCAGTAAAGTCAGACCCAAATCACCACGGCAAAAGAAGATGGATATGGATAAGTGCAGCAATAGCAGCTGCTTTACTCATAATGTGCACACTCATTCTATGGATAGCAATAAAGAAACACAAATTTGGACTTAAAGAGAAGAAAGTTAAAAGTAAGGAGAAAGAGATGCAAGAGCTGGCCGCTTCCGATGAATTATATAGTATCAAAGATCTTGAAGATGATTTCAAGGGACATGATATAAAAGTTTTTACCTATGCATCAATTTTGGAAGCAACCATGAATTTTTCCCCTGAAAACAAGTTAGGACAGGGAGGTTATGGACCTGTTTATAAGGGAATCTTTGCATCCGGGCAAGAAGTTGCTGTAAAAAGACTTTCAAAAACTTCTAGACAAGGAATTATTGAATTCAAAAATGAATTGGTACTGATATGTGAACTTCAACACACAAATCTTGTGCAACTACTTGGTTGTTGTATTCATGAAGAAGAAAGGATTCTAATCTACGAATATATGCCAAACAAAAGCTTGGATTTCTATCTATTCGATTCTACAAAAAGAAAGCTACTCGATTGGAAGAAGCGGTTCAGCATTATAGAAGGAATTTCTCAGGCATTGCTCTATCTTCATAAATATTCTAGACTAAAAATCATTCATAGAGACTTGAAAGCTAGCAACATACTTCTTGATGAAAATATGAATCCAAAAATTTCTGATTTTGGCATGGCAAGAATGTTCACACAACAGGAATCCACAATAAATACCAAAAGGATTGTCGGCACATATGGATACATGTCTCCAGAATATGCTATGGAAGGAATTTGTTCTTCAAAGTCTGATGTCTATAGCTTTGGAGTATTACTACTTGAAATTGTTTGTGGAAGAAAAAACAACAGCTTCTATGATGTTGATCATCCACTAAATCTAATAGGACATGCATGGGAGCTATGGAATGATGGCGAGTATATGCAGCTAATGGATCCATTATTAAGTGACTCATTTGTTCCCGATGAAGTGAAAAGGTGCATTCACGTTGGTCTCTTATGTGTACAACAAAATGCAAATGATCGACCTACAATGTCTGATGTTATATCAATGTTGACAAATAAATATGAACATGTTACTTTACCGACAAAACCAGCATTCTATGTTAGAAGAGATATCCTCGATGAGGAAAGAACTTCTAAAGCTCTGGACACTGACACCTATTCTACAACTGCAATTTCCTCTTCGGAAGTAGAAAGGCAGTAA 2466 0.3642 MRTYKSLVSSFLSRFDMILLHVWFKTRKQAVLTYYFWVWWTTSICVEAGNDSLKAGERLVAKSNLCSKQGSYCLSFDGTLDSKSNYYYLVIERMNNFGGRASVVWMYDRNHPVDINSAVLSLNYSGVLKIEFQYRKEIIIYSSPQPINNTVATMLDTGNFVLEQLHPNGTKTLLWQSFDYPADILIPAMKLGVNRKTGHNWSLVSWLTPSLPYLGEFSLEWDPKEEELNIKKRGKVYWKSGKLVNNGLFDNIPANVQQNYQYVIISNKDEDSFSFEIKDRNSKMLTEWALFSDGRFVSLEGELGNADICYGYNSDGGCQKWEDIPTCRKPGEVFEIKIGRPNTDYAILQDNVSYGYSDCKMSCWRNCGCNGFQEYSDNGTGCIFYPWNSTQEVDSESVNRFYMLEKPVKSDPNHHGKRRWIWISAAIAAALLIMCTLILWIAIKKHKFGLKEKKVKSKEKEMQELAASDELYSIKDLEDDFKGHDIKVFTYASILEATMNFSPENKLGQGGYGPVYKGIFASGQEVAVKRLSKTSRQGIIEFKNELVLICELQHTNLVQLLGCCIHEEERILIYEYMPNKSLDFYLFDSTKRKLLDWKKRFSIIEGISQALLYLHKYSRLKIIHRDLKASNILLDENMNPKISDFGMARMFTQQESTINTKRIVGTYGYMSPEYAMEGICSSKSDVYSFGVLLLEIVCGRKNNSFYDVDHPLNLIGHAWELWNDGEYMQLMDPLLSDSFVPDEVKRCIHVGLLCVQQNANDRPTMSDVISMLTNKYEHVTLPTKPAFYVRRDILDEERTSKALDTDTYSTTAISSSEVERQ 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06298 821 PIRSF SRK 309 821 IPR024171 GO:0004674
Vivi2g06298 821 PIRSF SRK 24 302 IPR024171 GO:0004674
Vivi2g06298 821 Gene3D - 44 178 IPR036426 -
Vivi2g06298 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 466 576 - -
Vivi2g06298 821 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 68 812 - -
Vivi2g06298 821 Pfam Protein tyrosine and serine/threonine kinase 504 772 IPR001245 GO:0004672|GO:0006468
Vivi2g06298 821 Pfam D-mannose binding lectin 103 206 IPR001480 -
Vivi2g06298 821 SMART serkin_6 501 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06298 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 577 780 - -
Vivi2g06298 821 SMART blect_4 50 181 IPR001480 -
Vivi2g06298 821 ProSiteProfiles Protein kinase domain profile. 501 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06298 821 SUPERFAMILY Protein kinase-like (PK-like) 486 792 IPR011009 -
Vivi2g06298 821 ProSiteProfiles Bulb-type lectin domain profile. 50 175 IPR001480 -
Vivi2g06298 821 SUPERFAMILY alpha-D-mannose-specific plant lectins 103 209 IPR036426 -
Vivi2g06298 821 Gene3D Transferase(Phosphotransferase) domain 1 577 784 - -
Vivi2g06298 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Vivi2g06298 821 Gene3D Phosphorylase Kinase; domain 1 451 576 - -
Vivi2g06298 821 CDD STKc_IRAK 507 774 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06298 Vivi-Chr2 198024971 198028939 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06298 437 790 Receptor kinase-like Gene Family AT3G45860 52.247 8.57e-123 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi2g06298 PK_Tyr_Ser-Thr 3.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06298 - - vvo:131653519 1370.14