Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06296 ATGATTATTCTCCTACATGTTTGGTTTAAAACAAAGAAACAAGTTGTGTTGATATACTACTTATGGGTATGGTGGAGTACTAGTTTTTGTGTTAAAGCAAGAAATGATAGTTTGAAGGCAGGTGAAAGATTGGATGCCAACTCCGCTCTATGCTCTAAGCAAGGCAGGTATTGTCTATCATTCGGTGAAATATTTCATGGAAAATTAGATAACGGAGATAATTACAATTACTTGATTATTGTAAATATGGCTAATTTCAATTATGGATCAGTAATATGGATATATGATAGTAACCAACCAATTGATATCAGTTCAGCGGTTTTATCTCTAAACTACTCTGGTGTGCTCAAAATTGAATTTCAACATAGAAAAGAAATAATCATTTACTCTTCATCCCAACCTATAAACAATACTTTGGCTACTATGCTAGACACAGGTAACTTTGTACTCGAACAACTTCACCCCAATGGAATAAAGAGTTTACTGTGGCAAAGTTTTGATTTTCCTTCAGCCGTTTTGGTCCCAACAATGAAGTTAGGTGTTAACCGAAAAACTGGACATAATTGGTCATTAGTTTCTTGGTTGACTAATTCGCGACCATCTTCTGGTGGATTTAGTCTCGAATGGGAACCAAAAGAAAGGGAATTGAACATTAAGAGACGCGGGATAGTGTATTGGAAAAGCGGAAAACTTGCAAATAATGGATTGTTCGACAACATTCCAGCAAATGTTCAACAAAATTATCAATACGTTATCATCTCTAACAAGGATGAAGATTCTTTTAGTTTTGAAATTAAAAACCAGAATTATAAGATGTCCCCAGAGTGGTATCTATCCTCTTCGGGCAGCCTCATGAATTTGGAAAGAGAGTTGGGTAATGCAGATATTTGTTATGGATATAATAGTGATAGAGGATGCCAAAAATGGGAGGATATACCAACTTGCAGGATGCCTGGTGAGGTGTTTGAGAGAAAGATGGGCAGACCCAACACTTACTATGCTAACTTCCTAGACAATGTGAGTTATGGTTACAGTGATTGCAAGTTGAGTTGTTGGAGAAATTGTAGTTGCAATGGATTCCAAGAATATTATGGTAATGGAACTGGATGTATATTTTATTCATGGAATTCTACACAAGATGTTGATTGGGAGGCTGACTTTAAATTTTACAAATTGAAAAAGCCAGTAAAGTCAGACCCAAATCACCATGTCAATGCAGGTAAAAGAAGGAGGATATGGATAAGTGCAGCAATAGCAACTGCTTTACTCATAATATGCTCACTCGTTCTATGCATAACAATAAAGAAACACAAATATGGACTTAAAGAGAAGAAAGTTATAGAAAAGGAGACTGAGATGCAAGAGTTGGCCGCTTCCAATGAATTATATAGTATTAAAGATCTTAAAGATGACTTCAAGGAACATGATATAAAAGTTTTTAGCTATGCATCAATTTTGGAAGCAACCATGGACTTTTCTCCCGAAAACAAGTTAGGACAGGGAGGCTATGGACCCGTTTATGAGGGAATCTTGGCAACCGGGCAAAAAGTTGCTGTAAAAAGACTTTCAAAAACATCTGGACAAGGAATTATTGAATTCAAAAATGAATTGGTACTGATATGCGAACTTCAACACACAAATCTTGTGCAACTACTTGGTTGTTGTATTCATGAAGAAGAAAGGATTCTCATCTACGAATATATGCCAAACAAAAGCTTGGATTTCTATCTATTCGATTCTACAAAAAGAAAACTACTCGATTGGAAGAAGCGCTTCAACATTATAGAAGGAATTTCTCAGGCATTACTCTATCTTCATAAATATTCAAGACTAAAAATTATTCATAGAGACTTGAAAGCGAGCAACATACTTCTTGATGAGAATATGAATCCAAAAATTTCTGATTTTGGCATGGCAAGAATGTTCACACAACAGGAATCCACAGTAAATACCAACAGGATTGTCGGCACATATGGATATATGTCTCCAGAATACGCTATGGAAGGAATTTGTTCTACAAAGTCTGATGTTTATAGCTTTGGAGTGTTGCTGCTTGAAATTGTTTGTGGAAGAAAAAACAACAGCTTCTATGACGATGATCATCCAATAAATCTAATAGGACATGCATGGGAGCTATGGAATGATGGTGAGTATATGCAGCTAATGGATCCATCATTAAATGATTCCTTTGTTCCCGATGAAGTGAAAAGATGCATTCATGTTGGTCTCTTATGTGTAGAACAATATGCAAATGATCGACCTACAATGTCTGATGTTATATCAATGTTGACAAACAAATATGAACATGTTACTTTACCGACAAGACCAGCATTCTATGTTAGAAGAGATATATCCCCAGAGAAAACAACTTCAAAAGTTCTGGACACTGAGACCTATTCTACGTCCATAATTTCCTCAGAAGTAAAAAGGAAATAA 2436 0.3567 MIILLHVWFKTKKQVVLIYYLWVWWSTSFCVKARNDSLKAGERLDANSALCSKQGRYCLSFGEIFHGKLDNGDNYNYLIIVNMANFNYGSVIWIYDSNQPIDISSAVLSLNYSGVLKIEFQHRKEIIIYSSSQPINNTLATMLDTGNFVLEQLHPNGIKSLLWQSFDFPSAVLVPTMKLGVNRKTGHNWSLVSWLTNSRPSSGGFSLEWEPKERELNIKRRGIVYWKSGKLANNGLFDNIPANVQQNYQYVIISNKDEDSFSFEIKNQNYKMSPEWYLSSSGSLMNLERELGNADICYGYNSDRGCQKWEDIPTCRMPGEVFERKMGRPNTYYANFLDNVSYGYSDCKLSCWRNCSCNGFQEYYGNGTGCIFYSWNSTQDVDWEADFKFYKLKKPVKSDPNHHVNAGKRRRIWISAAIATALLIICSLVLCITIKKHKYGLKEKKVIEKETEMQELAASNELYSIKDLKDDFKEHDIKVFSYASILEATMDFSPENKLGQGGYGPVYEGILATGQKVAVKRLSKTSGQGIIEFKNELVLICELQHTNLVQLLGCCIHEEERILIYEYMPNKSLDFYLFDSTKRKLLDWKKRFNIIEGISQALLYLHKYSRLKIIHRDLKASNILLDENMNPKISDFGMARMFTQQESTVNTNRIVGTYGYMSPEYAMEGICSTKSDVYSFGVLLLEIVCGRKNNSFYDDDHPINLIGHAWELWNDGEYMQLMDPSLNDSFVPDEVKRCIHVGLLCVEQYANDRPTMSDVISMLTNKYEHVTLPTRPAFYVRRDISPEKTTSKVLDTETYSTSIISSEVKRK 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06296 811 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
Vivi2g06296 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 568 771 - -
Vivi2g06296 811 SUPERFAMILY Protein kinase-like (PK-like) 477 785 IPR011009 -
Vivi2g06296 811 PIRSF SRK 9 307 IPR024171 GO:0004674
Vivi2g06296 811 PIRSF SRK 293 811 IPR024171 GO:0004674
Vivi2g06296 811 Gene3D Transferase(Phosphotransferase) domain 1 568 774 - -
Vivi2g06296 811 Pfam Protein tyrosine and serine/threonine kinase 495 763 IPR001245 GO:0004672|GO:0006468
Vivi2g06296 811 Gene3D Phosphorylase Kinase; domain 1 451 567 - -
Vivi2g06296 811 Pfam D-mannose binding lectin 91 194 IPR001480 -
Vivi2g06296 811 SUPERFAMILY alpha-D-mannose-specific plant lectins 90 198 IPR036426 -
Vivi2g06296 811 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 200 792 - -
Vivi2g06296 811 CDD STKc_IRAK 498 765 - -
Vivi2g06296 811 ProSiteProfiles Protein kinase domain profile. 492 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06296 811 FunFam Cysteine-rich receptor-like protein kinase 10 453 567 - -
Vivi2g06296 811 ProSiteProfiles Bulb-type lectin domain profile. 35 163 IPR001480 -
Vivi2g06296 811 Gene3D - 29 166 IPR036426 -
Vivi2g06296 811 Pfam PAN-like domain 327 373 IPR003609 -
Vivi2g06296 811 SMART serkin_6 492 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06296 Vivi-Chr2 198007626 198011969 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06296 448 806 Receptor kinase-like Gene Family AT4G11530 52.355 5.84e-120 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi2g06296 PK_Tyr_Ser-Thr 8.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06296 - - vvo:131653519 1380.93