Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06295 ATGATTATTCTCCTACATGTTTGGTTTAAAACAAAGAAACAAGTTGTGTTGATATACTACTTATGGGTATGGTGGAGTACTAGTTTTTGTGTTAAAGCAAGAAATGATAGTTTGAAGGCAGGTGAAAGATTGGATGCCAACTCCGCTCTATGCTCTAAGCAAGGCAGGTATTGTCTATCATTCGGTGAAATATTTCATGGAAAATTAGATAACGGAGATAATTACAATTACTTGATTATTGTAAATATGGCTAATTTCAATTATGGATCAGTAATATGGATATATGATAGTAACCAACCAATTGATATCAGTTCAGCGGTTTTATCTCTAAACTACTCTGGTGTGCTCAAAATTGAATTTCAACATAGAAAAGAAATAATCATTTACTCTTCATCCCAACCTATAAACAATACTTTGGCTACTATGCTAGACACAGGTAACTTTGTACTCGAACAACTTCACCCCAATGGAATAAAGAGTTTACTGTGGCAAAGTTTTGATTTTCCTTCAGCCGTTTTGGTCCCAACAATGAAGTTAGGTGTTAACCGAAAAACTGGACATAATTGGTCATTAGTTTCTTGGTTGACTAATTCGCGACCATCTTCTGGTGGATTTAGTCTCGAATGGGAACCAAAAGAAAGGGAATTGAACATTAAGAGACGCGGGATAGTGTATTGGAAAAGCGGAAAACTTGCAAATAATGGATTGTTCGACAACATTCCAGCAAATGTTCAACAAAATTATCAATACGTTATCATCTCTAACAAGGATGAAGATTCTTTTAGTTTTGAAATTAAAAACCAGAATTATAAGATGTCCCCAGAGTGGTATCTATCCTCTTCGGGCAGCCTCATGAATTTGGAAAGAGAGTTGGGTAATGCAGATATTTGTTATGGATATAATAGTGATAGAGGATGCCAAAAATGGGAGGATATACCAACTTGCAGGATGCCTGGTGAGGTGTTTGAGAGAAAGATGGGCAGACCCAACACTTACTATGCTAACTTCCTAGACAATGTGAGTTATGGTTACAGTGATTGCAAGTTGAGTTGTTGGAGAAATTGTAGTTGCAATGGATTCCAAGAATATTATGGTAATGGAACTGGATGTATATTTTATTCATGGAATTCTACACAAGATGTTGATTGGGAGGCTGACTTTAAATTTTACAAATTGAAAAAGCCAGTAAAGTCAGACCCAAATCACCATGGTAAAAGAAGGAGGATATGGATAAGTGCAGCAATAGCAACTGCTTTACTCATAATATGCTCACTCGTTCTATGCATAACAATAAAGAAACACAAATATGGACTTAAAGAGAAGAAAGTTATAGAAAAGGAGACTGAGATGCAAGAGTTGGCCGCTTCCAATGAATTATATAGTATTAAAGATCTTAAAGATGACTTCAAGGAACATGATATAAAAGTTTTTAGCTATGCATCAATTTTGGAAGCAACCATGGACTTTTCTCCCGAAAACAAGTTAGGACAGGGAGGCTATGGACCCGTTTATGAGGGAATCTTGGCAACCGGGCAAAAAGTTGCTGTAAAAAGACTTTCAAAAACATCTGGACAAGGAATTATTGAATTCAAAAATGAATTGGTACTGATATGCGAACTTCAACACACAAATCTTGTGCAACTACTTGGTTGTTGTATTCATGAAGAAGAAAGGATTCTCATCTACGAATATATGCCAAACAAAAGCTTGGATTTCTATCTATTCGATTCTACAAAAAGAAAACTACTCGATTGGAAGAAGCGCTTCAACATTATAGAAGGAATTTCTCAGGCATTACTCTATCTTCATAAATATTCAAGACTAAAAATTATTCATAGAGACTTGAAAGCGAGCAACATACTTCTTGATGAGAATATGAATCCAAAAATTTCTGATTTTGGCATGGCAAGAATGTTCACACAACAGGAATCCACAGTAAATACCAACAGGATTGTCGGCACATATGGATATATGTCTCCAGAATACGCTATGGAAGGAATTTGTTCTACAAAGTCTGATGTTTATAGCTTTGGAGTGTTGCTGCTTGAAATTGTTTGTGGAAGAAAAAACAACAGCTTCTATGACGATGATCATCCAATAAATCTAATAGGACATGCATGGGAGCTATGGAATGATGGTGAGTATATGCAGCTAATGGATCCATCATTAAATGATTCCTTTGTTCCCGATGAAGTGAAAAGATGCATTCATGTTGGTCTCTTATGTGTAGAACAATATGCAAATGATCGACCTACAATGTCTGATGTTATATCAATGTTGACAAACAAATATGAACATGTTACTTTACCGACAAGACCAGCATTCTATGTTAGAAGAGATATATCCCCAGAGAAAACAACTTCAAAAGTTCTGGACACTGAGACCTATTCTACGTCCATAATTTCCTCAGAAGTAAAAAGGAAATAA 2427 0.3564 MIILLHVWFKTKKQVVLIYYLWVWWSTSFCVKARNDSLKAGERLDANSALCSKQGRYCLSFGEIFHGKLDNGDNYNYLIIVNMANFNYGSVIWIYDSNQPIDISSAVLSLNYSGVLKIEFQHRKEIIIYSSSQPINNTLATMLDTGNFVLEQLHPNGIKSLLWQSFDFPSAVLVPTMKLGVNRKTGHNWSLVSWLTNSRPSSGGFSLEWEPKERELNIKRRGIVYWKSGKLANNGLFDNIPANVQQNYQYVIISNKDEDSFSFEIKNQNYKMSPEWYLSSSGSLMNLERELGNADICYGYNSDRGCQKWEDIPTCRMPGEVFERKMGRPNTYYANFLDNVSYGYSDCKLSCWRNCSCNGFQEYYGNGTGCIFYSWNSTQDVDWEADFKFYKLKKPVKSDPNHHGKRRRIWISAAIATALLIICSLVLCITIKKHKYGLKEKKVIEKETEMQELAASNELYSIKDLKDDFKEHDIKVFSYASILEATMDFSPENKLGQGGYGPVYEGILATGQKVAVKRLSKTSGQGIIEFKNELVLICELQHTNLVQLLGCCIHEEERILIYEYMPNKSLDFYLFDSTKRKLLDWKKRFNIIEGISQALLYLHKYSRLKIIHRDLKASNILLDENMNPKISDFGMARMFTQQESTVNTNRIVGTYGYMSPEYAMEGICSTKSDVYSFGVLLLEIVCGRKNNSFYDDDHPINLIGHAWELWNDGEYMQLMDPSLNDSFVPDEVKRCIHVGLLCVEQYANDRPTMSDVISMLTNKYEHVTLPTRPAFYVRRDISPEKTTSKVLDTETYSTSIISSEVKRK 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06295 808 ProSitePatterns Serine/Threonine protein kinases active-site signature. 610 622 IPR008271 GO:0004672|GO:0006468
Vivi2g06295 808 FunFam Cysteine-rich receptor-like protein kinase 10 450 564 - -
Vivi2g06295 808 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 565 768 - -
Vivi2g06295 808 SMART serkin_6 489 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06295 808 ProSiteProfiles Protein kinase domain profile. 489 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06295 808 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 200 789 - -
Vivi2g06295 808 SUPERFAMILY alpha-D-mannose-specific plant lectins 90 198 IPR036426 -
Vivi2g06295 808 Gene3D - 29 166 IPR036426 -
Vivi2g06295 808 Gene3D Phosphorylase Kinase; domain 1 448 564 - -
Vivi2g06295 808 PIRSF SRK 295 808 IPR024171 GO:0004674
Vivi2g06295 808 PIRSF SRK 9 298 IPR024171 GO:0004674
Vivi2g06295 808 CDD STKc_IRAK 495 762 - -
Vivi2g06295 808 SUPERFAMILY Protein kinase-like (PK-like) 474 782 IPR011009 -
Vivi2g06295 808 ProSiteProfiles Bulb-type lectin domain profile. 35 163 IPR001480 -
Vivi2g06295 808 Pfam D-mannose binding lectin 91 194 IPR001480 -
Vivi2g06295 808 Pfam PAN-like domain 327 373 IPR003609 -
Vivi2g06295 808 Gene3D Transferase(Phosphotransferase) domain 1 565 771 - -
Vivi2g06295 808 Pfam Protein tyrosine and serine/threonine kinase 492 760 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06295 Vivi-Chr2 198007624 198011969 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06295 445 803 Receptor kinase-like Gene Family AT4G11530 52.355 4.86e-120 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi2g06295 PK_Tyr_Ser-Thr 8.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06295 - - vvo:131653519 1386.32