Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06294 ATGATTATTCTCCTACATGTTTGGTTTAAAACAAAGAAACAAGTTGTGTTGATATACTACTTATGGGTATGGTGGAGTACTAGTTTTTGTGTTAAAGCAAGAAATGATAGTTTGAAGGCAGGTGAAAGATTGGATGCCAACTCCGCTCTATGCTCTAAGCAAGGCAGGTATTGTCTATCATTCGGTGAAATATTTCATGGAAAATTAGATAACGGAGATAATTACAATTACTTGATTATTGTAAATATGGCTAATTTCAATTATGGATCAGTAATATGGATATATGATAGTAACCAACCAATTGATATCAGTTCAGCGGTTTTATCTCTAAACTACTCTGGTGTGCTCAAAATTGAATTTCAACATAGAAAAGAAATAATCATTTACTCTTCATCCCAACCTATAAACAATACTTTGGCTACTATGCTAGACACAGGTAACTTTGTACTCGAACAACTTCACCCCAATGGAATAAAGAGTTTACTGTGGCAAAGTTTTGATTTTCCTTCAGCCGTTTTGGTCCCAACAATGAAGTTAGGTGTTAACCGAAAAACTGGACATAATTGGTCATTAGTTTCTTGGTTGACTAATTCGCGACCATCTTCTGGTGGATTTAGTCTCGAATGGGAACCAAAAGAAAGGGAATTGAACATTAAGAGACGCGGGATAGTGTATTGGAAAAGCGGAAAACTTGCAAATAATGGATTGTTCGACAACATTCCAGCAAATGTTCAACAAAATTATCAATACGTTATCATCTCTAACAAGGATGAAGATTCTTTTAGTTTTGAAATTAAAAACCAGAATTATAAGATGTCCCCAGAGTGGTATCTATCCTCTTCGGGCAGCCTCATGAATTTGGAAAGAGAGTTGGGTAATGCAGATATTTGTTATGGATATAATAGTGATAGAGGATGCCAAAAATGGGAGGATATACCAACTTGCAGGATGCCTGGTGAGGTGTTTGAGAGAAAGATGGGCAGACCCAACACTTACTATGCTAACTTCCTAGACAATGTGAGTTATGGTTACAGTGATTGCAAGTTGAGTTGTTGGAGAAATTGTAGTTGCAATGGATTCCAAGAATATTATGGTAATGGAACTGGATGTATATTTTATTCATGGAATTCTACACAAGATGTTGATTGGGAGGCTGACTTTAAATTTTACAAATTGAAAAAGCCAGTAAAGTCAGACCCAAATCACCATGTCAATGCAGGTAAAAGAAGGAGGATATGGATAAGTGCAGCAATAGCAACTGCTTTACTCATAATATGCTCACTCGTTCTATGCATAACAATAAAGAAACACAAATATGGACTTAAAGAGAAGAAAGTTATAGAAAAGGAGACTGAGATGCAAGAGTTGGCCGCTTCCAATGAATTATATAGTATTAAAGATCTTAAAGATGACTTCAAGGAACATGATATAAAAGTTTTTAGCTATGCATCAATTTTGGAAGCAACCATGGACTTTTCTCCCGAAAACAAGTTAGGACAGGGAGGCTATGGACCCGTTTATGAGGGAATCTTGGCAACCGGGCAAAAAGTTGCTGTAAAAAGACTTTCAAAAACATCTGGACAAGGAATTATTGAATTCAAAAATGAATTGGTACTGATATGCGAACTTCAACACACAAATCTTGTGCAACTACTTGGTTGTTGTATTCATGAAGAAGAAAGGATTCTCATCTACGAATATATGCCAAACAAAAGCTTGGATTTCTATCTATTCGATTCTACAAAAAGAAAACTACTCGATTGGAAGAAGCGCTTCAACATTATAGAAGGAATTTCTCAGGCATTACTCTATCTTCATAAATATTCAAGACTAAAAATTATTCATAGAGACTTGAAAGCGAGCAACATACTTCTTGATGAGAATATGAATCCAAAAATTTCTGATTTTGGCATGGCAAGAATGTTCACACAACAGGAATCCACAGTAAATACCAACAGGATTGTCGGCACATATGGATATATGTCTCCAGAATACGCTATGGAAGGAATTTGTTCTACAAAGTCTGATGTTTATAGCTTTGGAGTGTTGCTGCTTGAAATTGTTTGTGGAAGAAAAAACAACAGCTTCTATGACGATGATCATCCAATAAATCTAATAGGACATGCATGGGAGCTATGGAATGATGAACAATATGCAAATGATCGACCTACAATGTCTGATGTTATATCAATGTTGACAAACAAATATGAACATGTTACTTTACCGACAAGACCAGCATTCTATGTTAGAAGAGATATATCCCCAGAGAAAACAACTTCAAAAGTTCTGGACACTGAGACCTATTCTACGTCCATAATTTCCTCAGAAGTAAAAAGGAAATAA 2343 0.356 MIILLHVWFKTKKQVVLIYYLWVWWSTSFCVKARNDSLKAGERLDANSALCSKQGRYCLSFGEIFHGKLDNGDNYNYLIIVNMANFNYGSVIWIYDSNQPIDISSAVLSLNYSGVLKIEFQHRKEIIIYSSSQPINNTLATMLDTGNFVLEQLHPNGIKSLLWQSFDFPSAVLVPTMKLGVNRKTGHNWSLVSWLTNSRPSSGGFSLEWEPKERELNIKRRGIVYWKSGKLANNGLFDNIPANVQQNYQYVIISNKDEDSFSFEIKNQNYKMSPEWYLSSSGSLMNLERELGNADICYGYNSDRGCQKWEDIPTCRMPGEVFERKMGRPNTYYANFLDNVSYGYSDCKLSCWRNCSCNGFQEYYGNGTGCIFYSWNSTQDVDWEADFKFYKLKKPVKSDPNHHVNAGKRRRIWISAAIATALLIICSLVLCITIKKHKYGLKEKKVIEKETEMQELAASNELYSIKDLKDDFKEHDIKVFSYASILEATMDFSPENKLGQGGYGPVYEGILATGQKVAVKRLSKTSGQGIIEFKNELVLICELQHTNLVQLLGCCIHEEERILIYEYMPNKSLDFYLFDSTKRKLLDWKKRFNIIEGISQALLYLHKYSRLKIIHRDLKASNILLDENMNPKISDFGMARMFTQQESTVNTNRIVGTYGYMSPEYAMEGICSTKSDVYSFGVLLLEIVCGRKNNSFYDDDHPINLIGHAWELWNDEQYANDRPTMSDVISMLTNKYEHVTLPTRPAFYVRRDISPEKTTSKVLDTETYSTSIISSEVKRK 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06294 780 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 149 757 - -
Vivi2g06294 780 SMART serkin_6 492 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06294 780 Pfam Protein tyrosine and serine/threonine kinase 495 694 IPR001245 GO:0004672|GO:0006468
Vivi2g06294 780 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
Vivi2g06294 780 FunFam Cysteine-rich receptor-like protein kinase 10 453 567 - -
Vivi2g06294 780 Gene3D Transferase(Phosphotransferase) domain 1 568 743 - -
Vivi2g06294 780 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 568 720 - -
Vivi2g06294 780 SUPERFAMILY alpha-D-mannose-specific plant lectins 90 198 IPR036426 -
Vivi2g06294 780 PIRSF SRK 9 297 IPR024171 GO:0004674
Vivi2g06294 780 PIRSF SRK 295 720 IPR024171 GO:0004674
Vivi2g06294 780 PIRSF SRK 716 780 IPR024171 GO:0004674
Vivi2g06294 780 Pfam D-mannose binding lectin 91 194 IPR001480 -
Vivi2g06294 780 ProSiteProfiles Protein kinase domain profile. 492 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06294 780 Gene3D Phosphorylase Kinase; domain 1 451 567 - -
Vivi2g06294 780 SUPERFAMILY Protein kinase-like (PK-like) 477 756 IPR011009 -
Vivi2g06294 780 Gene3D - 29 166 IPR036426 -
Vivi2g06294 780 Pfam PAN-like domain 327 373 IPR003609 -
Vivi2g06294 780 ProSiteProfiles Bulb-type lectin domain profile. 35 163 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06294 Vivi-Chr2 198007618 198011972 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06294 448 775 Receptor kinase-like Gene Family AT4G11530 49.030 7.29e-101 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi2g06294 PK_Tyr_Ser-Thr 7.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06294 - - vvo:131653519 1301.96