Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06293 ATGATGATAAGGTTTAAAACAAAGAAACAAGTTATATTAATATACTACTTATGGGTGTGGTGGAGTACTAGTTTCTGTGTTATAGCAGGAAATGATAGTTTGAAGGCAGGTGAAAGAATGGTTGCCAACTCCACTCTATGCTCTAAGCAAGGCAGGTATTGTCTATTATTCGAACAACGATCAGTAATATGGAAATATGATAACAATTATAATTGCTTGGTTATAGAAATTAATACTAGTTTTGATCGAGGATCAGTAATATGGAAGTATGATAGTAACCAACCAATTGATATTAGTTCAGCGGTTTTATCTCTAAACTACTCCGGTGTGCTCAAAATTGAATTTCAATATAGGAAAGAAATAATCATTTACTCTTCACCTCAACCTATAAACAATACTGTGGCTACTATGCTAGACACAGGTAACTTTGTACTTGAACAACTTCACCCCAATGGAACTAAGACTTTATTGTGGCAGAGTTTTGATTATCCATTTGATGTTTTGGTCCCAACGATGAAGTTAGGTGTTAACCGAAAAACTGGACATAATTGGTCTTTAGTTTCGTTGTTGACTCCTTTGCTGCCAACTTTGGGTGGATTTAGTCTCGAATGGGAACCAAAAGAAGGGGAATTAAACATTAAGAGACACGGGAAAGTGTATTGGAAAGGCGGAAAACTTGGAAATAATGGAATGTTCGATAATATTCCAGCAAATGTTCAACAAAATTATCAATACGTTACTATCTCTAACAAGGATGAAGATTCTTTCAGTTTCGAAATTAAAGACCGGAATTATAAGATGTCCCCAAATTGGTTACTATCCTCTACAGGGAGGCTAGCGAGTTCAAAAGGAGTGTTTGGAAATGCAGATGTTTGTTATGGATATAATAGTGATAGAGGATGCCAAAAATGGGAGGATATACCAACTTGTAGGAAACCTGGTGAGGTGTTTGAGAGAAAGAGAGGCACACCCGTCGGTGACAATATTACCATGGAAGACAACGTGAGTATTGGTTACAATGATTGCAAGGTGAGTTGTTGGAGAAACTGTGATTGCAATGGATTCCAAGAATATTCTGATAATGGAACTGGATGTATATTTTATTCATGGAATTCTACACAACATGTTGATTCGGATAGTGTGAAAAACTTTTATATATTGGAAATGCCAGTAAAGTCAGACCCAAATCACCATGGTAAAAGAAGGTGGATATGGATAAGTGCAGCAATAGCAACTGCTTTACTCATAATATGCTCACTCGTTCTATGCATAACAATAAGGAAACACAAATATGGACTTAAAGAGAAGAAAGTTAAAAGAAAGGAGAAAGAGATGCAAGAGTTGGCCGCTTCCAATGAATTATATAGTATCAAAGATCTTGAAGATGATTTTAAAGGACATGATATAAAAGTTTTTAGCTATGCATCAATTTTGGAAGCAACCGTGGATTTTTCTGCTGAACACAAGTTAGGACAGGGAGGCTATGGACCCGTTTATAAGGGAATCTTAGCCACTGGGAAAGAAGTTGCTGTAAAAAAACTTTCAAAAACTTCTAGGCAAGGAATTATTGAATTCAAAAATGAGTTGGTATTGATATGTGAACTTCAACACACAAATCTGGTTCAACTACTTGGTTGTTGTATTCATCGAGAAGAAAGGATTATAGTTTACGAATATATGCCAAACAAAAGCTTGGATTTCTATCTATTTGATTCTACAAAAAAGAAGTTACTCGATTGGAAGAAGCGCTTCAACATTATAGAAGGAATTTCTCAGGCATTGCTTTATCTTCATAAATATTCAAGACTAAAAATCATTCATAGAGACTTGAAAGCTAGCAACATTCTTCTTGATGGGAATATGAATCCGAAAATTTCTGATTTTGGCATGGCAAAAATGTTCACACAGCAGGAATCTACAGTAAATACAAACAGGATTGTCGGGACATATGGATACATGTCTCCAAAATATGCTATGGAAGGAATTTGTTCTATAAAGTCTGACGTCTATAGCTTTGGAGTGTTGCTGTTAGAAATTGTTAGTGGAAGAAAAAATAATAGCTTCTATGATGCTGATCATCCACTAAACCTAGTAGGACATGCATGGGAGCTATGGAATGATGGGGAGTATATGCAGTTAATAGATCCATCATTAAGTGATTCAATTGTTCCTGATGAAGCAAAAAGGTGCATTCATGTTGGTCTCTTATGTGTAGAGCAATATGCAAATGATCGACCTACAATGTCTGATGTTATATCAATGTTGGCAAACAACTATGAACTTGTTACTTTACCAACAAGACCAGCATTCTATATTAGAAGAGAGATCTCCGAGGATGAAACAACTCCAAAAGTTCTGGTTAGTGACACTGACACCTACTCTACAACTGCAATTTCCTCTTCGGAAATAAAAAGCAATAAATAA 2424 0.3564 MMIRFKTKKQVILIYYLWVWWSTSFCVIAGNDSLKAGERMVANSTLCSKQGRYCLLFEQRSVIWKYDNNYNCLVIEINTSFDRGSVIWKYDSNQPIDISSAVLSLNYSGVLKIEFQYRKEIIIYSSPQPINNTVATMLDTGNFVLEQLHPNGTKTLLWQSFDYPFDVLVPTMKLGVNRKTGHNWSLVSLLTPLLPTLGGFSLEWEPKEGELNIKRHGKVYWKGGKLGNNGMFDNIPANVQQNYQYVTISNKDEDSFSFEIKDRNYKMSPNWLLSSTGRLASSKGVFGNADVCYGYNSDRGCQKWEDIPTCRKPGEVFERKRGTPVGDNITMEDNVSIGYNDCKVSCWRNCDCNGFQEYSDNGTGCIFYSWNSTQHVDSDSVKNFYILEMPVKSDPNHHGKRRWIWISAAIATALLIICSLVLCITIRKHKYGLKEKKVKRKEKEMQELAASNELYSIKDLEDDFKGHDIKVFSYASILEATVDFSAEHKLGQGGYGPVYKGILATGKEVAVKKLSKTSRQGIIEFKNELVLICELQHTNLVQLLGCCIHREERIIVYEYMPNKSLDFYLFDSTKKKLLDWKKRFNIIEGISQALLYLHKYSRLKIIHRDLKASNILLDGNMNPKISDFGMAKMFTQQESTVNTNRIVGTYGYMSPKYAMEGICSIKSDVYSFGVLLLEIVSGRKNNSFYDADHPLNLVGHAWELWNDGEYMQLIDPSLSDSIVPDEAKRCIHVGLLCVEQYANDRPTMSDVISMLANNYELVTLPTRPAFYIRREISEDETTPKVLVSDTDTYSTTAISSSEIKSNK 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06293 807 CDD STKc_IRAK 490 755 - -
Vivi2g06293 807 Gene3D Phosphorylase Kinase; domain 1 440 559 - -
Vivi2g06293 807 SUPERFAMILY Protein kinase-like (PK-like) 469 780 IPR011009 -
Vivi2g06293 807 ProSiteProfiles Protein kinase domain profile. 484 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06293 807 ProSitePatterns Serine/Threonine protein kinases active-site signature. 605 617 IPR008271 GO:0004672|GO:0006468
Vivi2g06293 807 SMART serkin_6 484 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06293 807 Coils Coil 438 458 - -
Vivi2g06293 807 SMART blect_4 31 164 IPR001480 -
Vivi2g06293 807 ProSiteProfiles PAN/Apple domain profile. 310 389 IPR003609 -
Vivi2g06293 807 FunFam Uncharacterized protein 460 559 - -
Vivi2g06293 807 Pfam D-mannose binding lectin 86 188 IPR001480 -
Vivi2g06293 807 SUPERFAMILY alpha-D-mannose-specific plant lectins 86 185 IPR036426 -
Vivi2g06293 807 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 203 794 - -
Vivi2g06293 807 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 560 763 - -
Vivi2g06293 807 PIRSF SRK 283 805 IPR024171 GO:0004674
Vivi2g06293 807 PIRSF SRK 4 285 IPR024171 GO:0004674
Vivi2g06293 807 Pfam Protein tyrosine and serine/threonine kinase 486 755 IPR001245 GO:0004672|GO:0006468
Vivi2g06293 807 Gene3D - 26 161 IPR036426 -
Vivi2g06293 807 Gene3D Transferase(Phosphotransferase) domain 1 560 763 - -
Vivi2g06293 807 ProSiteProfiles Bulb-type lectin domain profile. 31 158 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06293 Vivi-Chr2 197986438 197990701 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06293 461 794 Receptor kinase-like Gene Family AT4G23150 54.118 7.58e-119 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi2g06293 PK_Tyr_Ser-Thr 3.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06293 - - vvo:131653519 1320.45