Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi2g06291 | ATGGTTTTCTTAACGCAGATTTGGCTGCACGGAAACAAGTTTTCAGGTACGATTCCGAAGAACATTGGAAATCTCACTGCCTTGAAGGAACTCAACCTTAACAGTAATCAGTTTGTTGGGTTGATTCCGCAATCTTTAGCAGAAATGAACCTCGAGTTACTTGTTTTGAACAATAACATGCTAATGGGTCCAATACCGAAGTTTAAAGCTGCAAACTTTACTTATGATGATAATCTCTTTTGCCAAACTGAGCCTGGACTAGAATGTTCTCAACAAGTTACATCACTGTTGGATTTTCTGGATAATCTGAATTATCCATCGTTTCTAATTTCCGATTGGTCGGGTAATAAACCGTGCACAAGTAGCACAGGACCATGGTTTGGATTGAGCTGCAATTCCTCTGAGGTATCTTTAATTAATCTACCAAGACATAAGCTTAATGGTAGTTTAAGTCCTTCACTTGCTAAGTTAGAATCACTTCTCGAAATTAGGCTTGCTGGAAATAATATATCTGGCGTAGTTCCCAGCGAGTTTACTCAATTGAAATCCTTGAGATTGTTGGATTTGAGTGACAATAATATTGAATCTCCTTTGCCGATTTTTCGTGATGGTGTGAAGGTTATTACGGACGGTAACCCTTTTCTTTATAATCAAACTGGAGGGAGTGTTCGTCCTGTTAATAGCAGCCCGAGTTATGAAAACAACCATACTCGCTCTCCGTCTTCATATAATCAGCTAGTTCCAAGCTCACATCACAGAATATTCAAGACAGTAGCAACATTGGTTGGAGTTGCAGTGTTTGCAGTTGTAGTTTGTTTTATTGTTTATCTCTTTTTATGTTTCTTTAAGAAGGATAAAAACTCATTGGATGCTCCGAGTTCCATTGTGGTTCACCCTCGAGATTCATCTGATCCATACAATGGAGTTAAAATTACGGTTTCAAGCAATAACACTGGAAGCTTAACAGAAAAATCCGGGACAAGTTCTCTGACTAACTTAAGTGGCGAAACTAAAAACTCTCACTTAATTGAGGTTGGAAACCAGGTCATATCGGTGCAAGTGCTACGCAAGGTTACTAACGATTTTGCATCGGAAAATGAGCTAGGCCGTGGTGGATTTGGAACAGTTTACAAAGGGGAATTAGAAGATGGAACCAAGATAGCAGTAAAGAGAATGGAGAATGGAACTATCGGAAATAAGGCAGTGGAAGAGTTTCAAGCTGAAATAGATGTTCTTTCTAAGGTTCGTCATCGACATTTGGTATCTCTTTTGGGGCATTCCATTGAAGGAAATGAAAGACTTTTAGTTTATGAATATATGCCGCTTGGTGCTCTTAGTCAGCATCTTTTTCATTGGAAAAAATTGGACTTAAAGCCTTTGTCTTGGTCACAAAGGCTTGTAATAGCACTAGATGTTGCTAGAGCGATGGAATATCTTCACGGCCTTACTCGCGAAACCTTTATTCACAGAGATCTCAAGTCTTCTAATATTCTACTCGGTGACGATTTTCGTGCAAAAGTTTCGGATTTTGGTCTCGTGAAGCTTGCCCCAAATGGTGAAAAATCTGTAGTAACAAAACTTGCTGGGACTTTTGGTTACTTAGCCCCGGAATATGCAGTGATGGGAAAAATCACCACAAAAGTTGATGTATTCAGCTATGGTGTCGTGTTAATGGAACTTCTAACCGGGCTAACGGCCCTTGATGAGAGCCGGTCAGAGGAAATCCGATACTTGGCAGAATGGTTTTGGCGAGTTAAATCAAACAATGAAAAGCTTATGGCTGCTATTGATCCAGCTTTGGAACAAGTCGAAGAAACATGTGAAAGCATAACTATTGTAGCAGAACTTGCTGGACATTGCACTGCTAGGGAAGCATACCATAGGCCAGATATGAGTCATGCTGTCAACGTACTATCAGCCTTAGTGGAGAAATGGCGACCGGTTTCCAATGAATTCGACGATTCCTATTCTGGCGTTGACGACACTCGACCACTTCCTCAAATGTTGAAAATTTGGAAGGATGCAGAAAACAGTGAGTTTAGTTATAGTAGTACTTCTGCTAGTCTTGAAGACAGTAAAGGAAGTATTGCAGTGAGGCCTACTGGATTTGCTGACTCTTTCACTTCTGCAGATGCTAGATGA | 2142 | 0.4024 | MVFLTQIWLHGNKFSGTIPKNIGNLTALKELNLNSNQFVGLIPQSLAEMNLELLVLNNNMLMGPIPKFKAANFTYDDNLFCQTEPGLECSQQVTSLLDFLDNLNYPSFLISDWSGNKPCTSSTGPWFGLSCNSSEVSLINLPRHKLNGSLSPSLAKLESLLEIRLAGNNISGVVPSEFTQLKSLRLLDLSDNNIESPLPIFRDGVKVITDGNPFLYNQTGGSVRPVNSSPSYENNHTRSPSSYNQLVPSSHHRIFKTVATLVGVAVFAVVVCFIVYLFLCFFKKDKNSLDAPSSIVVHPRDSSDPYNGVKITVSSNNTGSLTEKSGTSSLTNLSGETKNSHLIEVGNQVISVQVLRKVTNDFASENELGRGGFGTVYKGELEDGTKIAVKRMENGTIGNKAVEEFQAEIDVLSKVRHRHLVSLLGHSIEGNERLLVYEYMPLGALSQHLFHWKKLDLKPLSWSQRLVIALDVARAMEYLHGLTRETFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPNGEKSVVTKLAGTFGYLAPEYAVMGKITTKVDVFSYGVVLMELLTGLTALDESRSEEIRYLAEWFWRVKSNNEKLMAAIDPALEQVEETCESITIVAELAGHCTAREAYHRPDMSHAVNVLSALVEKWRPVSNEFDDSYSGVDDTRPLPQMLKIWKDAENSEFSYSSTSASLEDSKGSIAVRPTGFADSFTSADAR | 713 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi2g06291 | 713 | CDD | STKc_IRAK | 368 | 638 | - | - | |
Vivi2g06291 | 713 | Pfam | Protein tyrosine and serine/threonine kinase | 365 | 637 | IPR001245 | GO:0004672|GO:0006468 | |
Vivi2g06291 | 713 | ProSiteProfiles | Protein kinase domain profile. | 362 | 642 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vivi2g06291 | 713 | SUPERFAMILY | L domain-like | 3 | 200 | - | - | |
Vivi2g06291 | 713 | PANTHER | OSJNBA0070M12.3 PROTEIN | 1 | 713 | - | - | |
Vivi2g06291 | 713 | FunFam | receptor protein kinase TMK1 | 324 | 439 | - | - | |
Vivi2g06291 | 713 | Gene3D | Ribonuclease Inhibitor | 1 | 91 | IPR032675 | - | |
Vivi2g06291 | 713 | Gene3D | Phosphorylase Kinase; domain 1 | 324 | 439 | - | - | |
Vivi2g06291 | 713 | SMART | serkin_6 | 362 | 641 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vivi2g06291 | 713 | Gene3D | Ribonuclease Inhibitor | 92 | 218 | IPR032675 | - | |
Vivi2g06291 | 713 | ProSitePatterns | Protein kinases ATP-binding region signature. | 368 | 390 | IPR017441 | GO:0005524 | |
Vivi2g06291 | 713 | MobiDBLite | consensus disorder prediction | 219 | 244 | - | - | |
Vivi2g06291 | 713 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 487 | 499 | IPR008271 | GO:0004672|GO:0006468 | |
Vivi2g06291 | 713 | Gene3D | Transferase(Phosphotransferase) domain 1 | 440 | 661 | - | - | |
Vivi2g06291 | 713 | FunFam | Leucine-rich repeat receptor-like kinase | 91 | 218 | - | - | |
Vivi2g06291 | 713 | SMART | LRR_typ_2 | 25 | 48 | IPR003591 | - | |
Vivi2g06291 | 713 | SMART | LRR_typ_2 | 181 | 203 | IPR003591 | - | |
Vivi2g06291 | 713 | SMART | LRR_typ_2 | 157 | 180 | IPR003591 | - | |
Vivi2g06291 | 713 | SUPERFAMILY | Protein kinase-like (PK-like) | 341 | 638 | IPR011009 | - | |
Vivi2g06291 | 713 | Pfam | Leucine rich repeat | 150 | 194 | IPR001611 | GO:0005515 | |
Vivi2g06291 | 713 | FunFam | receptor protein kinase TMK1 | 440 | 657 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi2g06291 | Vivi-Chr2 | 197905427 | 197908260 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi2g06291 | 278 | 641 | Glycoside Hydrolase | AT3G07070 | 38.965 | 5.63e-71 | 235 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-IX | Vivi2g06291 | PK_Tyr_Ser-Thr | 1.2e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi2g06291 | K00924 | - | gmx:100785090 | 1044.65 |