Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06285 ATGGGTTTTTTGTTGAAAGAAGTTTTGAAGACTTTGTGTGGTCGGAATCAGTGGTCTTATGCTGTGTTCTGGAAGATTGGTTGCAACAACTCTAAGCTATTGATTTGGGAAGAATGTTATTATGAACAATTTTCACGACCTTCCGTGCCTAATCCGAATGAGGAAGGATGCTGGTTTTCTTCTGAGTTTCAATCATCTCATCTAGGAATTCAAGAGGAGGATAGAGTCGGTTCTTTGATTAACAAATTGAGTGTAAATAATTTAGTCGTTGTTGCAGGTGAAGGTATAATTGGACGCGCTGCATTTACCAATAGCCACGAGTGGATTCTCTTGAATAATTTTGCTAAAGATGCATATCCGCCTGAGGTATATGCTGAAATGCATCTCCAATTTTCAGCTGGAATGCAGACAGTATCAGTTATTCCTGTGCTTCCTCATGGGGTTGTTCAAGTTGGTTCTTTCTTGCCTATAATGGAGAATATCGGGTTTGTGCATGAAGTAAAGAGCCTGATTTTGCAACTGGGGTGTATTCCTAACGCCCTTCTATCCGAGGACTATTCGGCTAAATTTTCGAATGAAAGACTTGATGGACGTGCTACTTCTGGTGTGCCTGTGTCGGTTGATTTGTCAGTCATTACCTCGAATTCCACTCGTTCCGTAGTTAATGGCTCCAATCACCAAAGTTATTCATCTCACTCACTTTGTCCGTTAAGGGGTGAAAATAATAGTCGTCAGGACAGGGTTGTCGTGGCTGAAGTAATACCTTCGAATTTTGATTCAAGCCAGCACCAGCATTCTGTTTCATATAATGCAGTATCTGAATTCAATAACTTAGCTGGTTCTGCGCCGTTTGGCCAATCAGGGCCATGTGATTATGTTAACCCTCGTGTTAATGTGTCAAGTTCCGTAAACATTTCTCAACTAAAAACAGATCGAAGCCATAACATTAACCATAATATGAGTTCTAGCAGTACTTCGTTGCTAAGAGGAATCCCAGTGCATGGTGGAATGAATAGTCTTTTGAGGACTCCAGAATGTTCTGAGCAGAAGATTCTTCCCGAAGTTTCAAAGTTTTCTTCAACCGATCAAAAGATAGACTATAACATGCTTCAGACTCGTAACATTCCCTGTTTTAACGTTGAGGAGCATGTGCCGAATAGTAGTCTTATCCCAGGTTTTGTCCGTGATTGCATTGAAAAAGACGGTACCGGTCAATCTGCGATGAATCCTAAACACGAAGAAGCTTGTGGTCAACATTCATCAGGCGGTGACGACTTGTTCGATATTTTAGGTATGGATTTTAAAAACGAACTTCTGAAGGGACACTGGAATGAACTGTTTGCCGATGAACCAGATGGTAATGCTGAAAATATGGTTAAAAAGGAAACATGTTTGAACATAGAGGGTACAAGTTCTGATTATTATTCGGCCAACAAATCGATGTCGGACAGTGGCATTTTCTCTGGGATGTCAACAGACAACCTCTTGGATGCCGTGGTCTCAAAGGCCAAACCGACTATGAAACAAAATTCCGATGACTTCTCTTGCAGAACAACGTTGACCGGGAATAGTACCGCTTCTATTCCCTCTCCTCTAGGAAGGAAGTTTATGTCTAGTAATTTCCAAGGGGGGTTGTTTGATATACCTAAGAATGGAGGTAAAACGGGTGCTGTAGAAACTAGTTCTCTAAGGTCTGGTTGTAGCAAGGACGAAAACTTTTCTCAAACTACGACTTTATGCGGTTCTCAACTTAGTTCATGGTTGGAGAATGGCGGCAATCTGAAGGGAGAAAATAGTGTTTCAACTGGATACTCGAAGCGCCCGAATGAAGCTTGCAAATCTAATCGCAAAAGGCTTAAACCAGGGGAGAATCCAAGGCCTCGACCTAAAGATCGCCAAATGATTCAAGATCGTGTCAAAGAGTTACGAGAGATTGTTCCAAATGGCGGAAAATGTAGCATAGATGCACTGCTGGAACGGACCATTAAGCATATGCTTTTCTTGCAAAGTGTGACAAAGCACGCGGACAAGCTGAAAAAGACCGGGGAGTCTAAGATTATTAGTAAAGAAGGTGGATTGGTTTTGAAAGATAACTTTGAGGGAGGAGCTACATGGGCATATGAGGTTGGCTCTCAATCAATGGTTTGTCCGATTATAGTCGAAGATTTGAATACTCCTCGTCAGATGCTAGTGGAGATGCTTTGCGAGGAACGGGGTTTCTTTCTTGAAATTGCCGACTTAATCAGAGGATTAGGCTTAACCATCTTGAAAGGGGTAATGGAAGCTCACAATGACAAAATCTGGGCACGTTTTGTTGTCGAGGCAAACAGGGACGTAACGAGGATGGAAATATTTATGTCACTCGTTCGTCTTCTGGAGCAAACGATGAAGGGCAATGCGTCTTCATCCAATGCCATTGATGACATGTTAGGTTACAACTCTTTACCCCAGAAGGCCTAA 2460 0.4207 MGFLLKEVLKTLCGRNQWSYAVFWKIGCNNSKLLIWEECYYEQFSRPSVPNPNEEGCWFSSEFQSSHLGIQEEDRVGSLINKLSVNNLVVVAGEGIIGRAAFTNSHEWILLNNFAKDAYPPEVYAEMHLQFSAGMQTVSVIPVLPHGVVQVGSFLPIMENIGFVHEVKSLILQLGCIPNALLSEDYSAKFSNERLDGRATSGVPVSVDLSVITSNSTRSVVNGSNHQSYSSHSLCPLRGENNSRQDRVVVAEVIPSNFDSSQHQHSVSYNAVSEFNNLAGSAPFGQSGPCDYVNPRVNVSSSVNISQLKTDRSHNINHNMSSSSTSLLRGIPVHGGMNSLLRTPECSEQKILPEVSKFSSTDQKIDYNMLQTRNIPCFNVEEHVPNSSLIPGFVRDCIEKDGTGQSAMNPKHEEACGQHSSGGDDLFDILGMDFKNELLKGHWNELFADEPDGNAENMVKKETCLNIEGTSSDYYSANKSMSDSGIFSGMSTDNLLDAVVSKAKPTMKQNSDDFSCRTTLTGNSTASIPSPLGRKFMSSNFQGGLFDIPKNGGKTGAVETSSLRSGCSKDENFSQTTTLCGSQLSSWLENGGNLKGENSVSTGYSKRPNEACKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGGKCSIDALLERTIKHMLFLQSVTKHADKLKKTGESKIISKEGGLVLKDNFEGGATWAYEVGSQSMVCPIIVEDLNTPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEAHNDKIWARFVVEANRDVTRMEIFMSLVRLLEQTMKGNASSSNAIDDMLGYNSLPQKA 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06285 819 MobiDBLite consensus disorder prediction 591 609 - -
Vivi2g06285 819 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 619 668 IPR011598 GO:0046983
Vivi2g06285 819 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 170 IPR025610 -
Vivi2g06285 819 CDD bHLH_AtLHW_like 623 692 - -
Vivi2g06285 819 MobiDBLite consensus disorder prediction 591 633 - -
Vivi2g06285 819 MobiDBLite consensus disorder prediction 610 633 - -
Vivi2g06285 819 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 808 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06285 Vivi-Chr2 197864462 197870134 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06285 413 816 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 50.732 1.35e-112 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06285 - - cam:101492357 1166.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06285 2 197864462 197870134 Vivi2g06285 2 197864462 197870134 ECH