Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06269 ATGTTTGGAAGAGGTGCACCGAAGAAAAGCGATAACACAAAGTATTATGAGATTCTCGGCGTTTCGAAGAGCGCTTCTCCTGATGATTTGAAGAAAGCGTACAAGAAAGCTGCCATCAAGAATCATCCTGATAAGGGTGGTGATCCTGAGAAGTTCAAAGAGCTTGCACAAGCTTATGAGGTTTTGAGTGATCCTGAGAAGCGTGAGATATATGATCAATATGGTGAAGATGCACTTAAGGAAGGAATGGGTGGTGGTGGCGGTGGCCATGACCCATTTGATATCTTTTCGTCTTTCTTTGGTGGTGGTGGATTTCCAGGTGGTGGTAGTAGAGGCAGAAGGCAGAGACGTGGGGAAGATGTTGTTCACCCTTTGAAGGTCTCTTTGGAGGATCTTTACCTTGGGACATCTAAGAAGCTTTCTCTCTCGAGAAATGTCTTGTGTTCCAAGTGCAATGGGAAAGGTTCTAAGTCTGGGGCTTCTATGACATGCTCTGGTTGTCAAGGAAGTGGTATGAAGATCTCTATGAGGCATCTGGGTGCTAATATGATTCAACAAATGCAACATCCTTGCAATGAGTGTAAGGGTACTGGAGAGACAATTTCTGACAAAGATCGATGCCCACAGTGCAAGGGAGAGAAGGTTGTTCAACAGAAGAAAGTGCTTGAAGTTCATGTTGAAAAGGGCATGAAGAATGGGCAGAAGATTACGTTCCCTGGTGAAGCTGATGAAGCGCCGGATACAGTTACTGGAGATATCGTATTTGTGCTTCAACAAAAGGAGCATCCCAAGTTCAGAAGAAATGGTGAAGATCTTTTTGTAGAGCACACTCTGTCCCTCACTGAAGCTTTATGTGGTTTCCAGTTCGCCCTGACTCATTTGGATGCTCGCCAACTCTTGATTAAGTCAAACCCTGGAGAAGTTGTCAAGCCTGATTCTTATAAGGCAATTAACGATGAAGGGATGCCAATGTACCAAAGGCCATTCATGAAGGGCAAGCTTTACATTCACTTCACTGTGGAGTTTCCTGAGTCTCTGACTCTTGATCAGGTCAAGGCGTTGGAGTCAATTCTGCCAGCTCGGCCTGTATCACAATTGACAGACATGGAGATAGATGAGTGTGAGGAGACAACACTTCATGATGTCAACATAGAAGAAGAGACAAGGAGGAAGCAGCAAGCTCAGGAGGCTTATGATGATGACGATGATATGCCTGGTGGTGCTCAGAGAGTGCAATGCGCTCAACAGTAA 1251 0.4508 MFGRGAPKKSDNTKYYEILGVSKSASPDDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGGGHDPFDIFSSFFGGGGFPGGGSRGRRQRRGEDVVHPLKVSLEDLYLGTSKKLSLSRNVLCSKCNGKGSKSGASMTCSGCQGSGMKISMRHLGANMIQQMQHPCNECKGTGETISDKDRCPQCKGEKVVQQKKVLEVHVEKGMKNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFRRNGEDLFVEHTLSLTEALCGFQFALTHLDARQLLIKSNPGEVVKPDSYKAINDEGMPMYQRPFMKGKLYIHFTVEFPESLTLDQVKALESILPARPVSQLTDMEIDECEETTLHDVNIEEETRRKQQAQEAYDDDDDMPGGAQRVQCAQQ 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06269 416 Pfam DnaJ C terminal domain 122 343 IPR002939 -
Vivi2g06269 416 MobiDBLite consensus disorder prediction 386 406 - -
Vivi2g06269 416 ProSiteProfiles dnaJ domain profile. 14 75 IPR001623 -
Vivi2g06269 416 Gene3D - 262 344 - -
Vivi2g06269 416 MobiDBLite consensus disorder prediction 386 416 - -
Vivi2g06269 416 ProSiteProfiles Zinc finger CR-type profile. 135 219 IPR001305 GO:0031072|GO:0051082
Vivi2g06269 416 Hamap Chaperone protein DnaJ [dnaJ]. 11 369 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Vivi2g06269 416 Gene3D - 148 214 - -
Vivi2g06269 416 SMART dnaj_3 13 67 IPR001623 -
Vivi2g06269 416 FunFam Chaperone protein dnaJ 3 215 255 - -
Vivi2g06269 416 Coils Coil 384 404 - -
Vivi2g06269 416 Gene3D DnaJ domain 11 110 IPR036869 -
Vivi2g06269 416 FunFam DnaJ subfamily A member 2 262 344 - -
Vivi2g06269 416 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 145 217 IPR036410 -
Vivi2g06269 416 SUPERFAMILY HSP40/DnaJ peptide-binding domain 119 263 IPR008971 GO:0006457|GO:0051082
Vivi2g06269 416 Pfam DnaJ domain 14 72 IPR001623 -
Vivi2g06269 416 SUPERFAMILY HSP40/DnaJ peptide-binding domain 265 354 IPR008971 GO:0006457|GO:0051082
Vivi2g06269 416 Gene3D - 111 260 - -
Vivi2g06269 416 SUPERFAMILY Chaperone J-domain 9 110 IPR036869 -
Vivi2g06269 416 CDD DnaJ_zf 148 214 IPR001305 GO:0031072|GO:0051082
Vivi2g06269 416 PRINTS DnaJ domain signature 47 67 IPR001623 -
Vivi2g06269 416 PRINTS DnaJ domain signature 67 86 IPR001623 -
Vivi2g06269 416 PRINTS DnaJ domain signature 16 34 IPR001623 -
Vivi2g06269 416 FunFam DnaJ subfamily A member 2 148 214 - -
Vivi2g06269 416 Pfam DnaJ central domain 148 214 IPR001305 GO:0031072|GO:0051082
Vivi2g06269 416 CDD DnaJ 15 64 IPR001623 -
Vivi2g06269 416 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 12 398 IPR044713 GO:0006457|GO:0030544
Vivi2g06269 416 CDD DnaJ_C 119 346 - -
Vivi2g06269 416 ProSitePatterns Nt-dnaJ domain signature. 52 71 IPR018253 -
Vivi2g06269 416 FunFam dnaJ protein homolog 11 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06269 Vivi-Chr2 197504552 197506825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06269 5 74 C2H2 Transcription Factor Family AT1G74250 40.506 4.23e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06269 K09503 - twl:119980998 726.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06269 2 197504552 197506825 Vivi2g06269 2 197504552 197506825 ECH
Vivi2g06269 2 197504552 197506825 Vivi5g02104 5 86410458 86413220 PCT