Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06267 ATGGATCCCTTGATCCGCAAGCTCCGGCGCCTCCTTCTCCGATGGCTTCACCGATCTCGTTCTGATGAATATGAATTGTTGAAAGTGGATGAATGTGATCTGTTGAATTGTTCAGGATCCGTGTTTTTTGTGAGGAGAATTTCGTATAAGGAAGTTAGAAAAGCGACCGATAGTTTTCAAAGAATAGTTTATAGCAATTCCGAAGTTTCTGCATATGCAGCGAATTTCGGAGAGGGGTGCGGCGGTGTTTGTTTGGTGAAAGAAGTTAAGGATTTTGATAGAGGAAATGATGAGAGTTTTCATAAACAAGTGCAGTTGTTGGGACGGTTGCATCATCGGCACCTTCTTTCGCTAAAAGGCTTTTCGTTGGGACACGATCGAAAGAGCAAGAGATTGCTTGTATTTGACAACATAGAAAATGGAAGCTTAAAGGAGCATCTCAATGATCCCTTGAAGACTCCTTTAAATTGGAGGACGAGGTTGCAGATAGCTAATGGCGTTGTGGCTGCACTGGAATACTTGTTTCTTTTCAGTGAACCGCCAATAAGTCATGTCTCTATTAGCTCTAGCAATATTATGTTAGATGAGAACTTCACCCCTAAACTATCTGATTTTGGCCTTCTTACTGGTGGAAGTTCTGTCATGGTGACAGAAGATTGCACGGGACAGGAAAACCGTAAGATTATATTCCAACTTGGAGTGCTCATCCTGGAACTTGTCACTGGTCAGTCTTCAGAGATGGAAGGTTCTGATTTAATTGAATGGATTCAAGAATCCCGATTTTTCAGTTCCATAGATAAGATGTTAGACCCTGATCTTGGAAACAATTATGATGGTACAGAACTTAAAAGTCTTCTAGCTGTGGCAAAATTATGTATCAAATCATGGGACAAGCCTTCATATACAATTCCTCAGTTATTTCGATATCTCCAAAAGGAGACTGATATTCCCCAACATTAG 960 0.4083 MDPLIRKLRRLLLRWLHRSRSDEYELLKVDECDLLNCSGSVFFVRRISYKEVRKATDSFQRIVYSNSEVSAYAANFGEGCGGVCLVKEVKDFDRGNDESFHKQVQLLGRLHHRHLLSLKGFSLGHDRKSKRLLVFDNIENGSLKEHLNDPLKTPLNWRTRLQIANGVVAALEYLFLFSEPPISHVSISSSNIMLDENFTPKLSDFGLLTGGSSVMVTEDCTGQENRKIIFQLGVLILELVTGQSSEMEGSDLIEWIQESRFFSSIDKMLDPDLGNNYDGTELKSLLAVAKLCIKSWDKPSYTIPQLFRYLQKETDIPQH 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06267 319 FunFam probable receptor-like protein kinase At1g49730 229 318 - -
Vivi2g06267 319 Pfam Protein tyrosine and serine/threonine kinase 84 209 IPR001245 GO:0004672|GO:0006468
Vivi2g06267 319 ProSiteProfiles Protein kinase domain profile. 49 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06267 319 PANTHER OS01G0253100 PROTEIN 33 313 - -
Vivi2g06267 319 Gene3D Transferase(Phosphotransferase) domain 1 229 319 - -
Vivi2g06267 319 SUPERFAMILY Protein kinase-like (PK-like) 40 251 IPR011009 -
Vivi2g06267 319 Gene3D Transferase(Phosphotransferase) domain 1 138 226 - -
Vivi2g06267 319 Gene3D Phosphorylase Kinase; domain 1 36 136 - -
Vivi2g06267 319 FunFam Protein kinase superfamily protein 35 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06267 Vivi-Chr2 197493600 197496866 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06267 39 319 Receptor kinase-like Gene Family AT3G19300 36.688 1.18e-53 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Vivi2g06267 PK_Tyr_Ser-Thr 7.8e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06267 - - vvo:131647859 614.764