Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06266 ATGGATCCCTTGATCCGCAAGCTCCGGCGCCTCCTTCTCCGATGGCTTCACCGATCTCGTTCTGATGAATATGAATTGTTGAAAGTGGATGAATGTGATCTGTTGAATTGTTCAGGATCCGTGTTTTTTGTGAGGAGAATTTCGTATAAGGAAGTTAGAAAAGCGACCGATAGTTTTCAAAGAATAGTTTATAGCAATTCCGAAGTTTCTGCATATGCAGCGAATTTCGGAGAGGGGTGCGGCGGTGTTTGTTTGGTGAAAGAAGTTAAGGATTTTGATAGAGGAAATGATGAGAGTTTTCATAAACAAGTGCAGTTGTTGGGACGGTTGCATCATCGGCACCTTCTTTCGCTAAAAGGCTTTTCGTTGGGACACGATCGAAAGAGCAAGAGATTGCTTGTATTTGACAACATAGAAAATGGAAGCTTAAAGGAGCATCTCAATGATCCCTTGAAGACTCCTTTAAATTGGAGGACGAGGTTGCAGATAGCTAATGGCGTTGTGGCTGCACTGGAATACTTGTTTCTTTTCAGTGAACCGCCAATAAGTCATGTCTCTATTAGCTCTAGCAATATTATGTTAGATGAGAACTTCACCCCTAAACTATCTGATTTTGGCCTTCTTACTGGTGGAAGTTCTGTCATGGTGACAGAAGATTGCACGGGACAGGAAAACCGTAAGATTATATTCCAACTTGGAGTGCTCATCCTGGAACTTGTCACTGGTCAGTCTTCAGAGATGGAAGAACTTAAAAGTCTTCTAGCTGTGGCAAAATTATGTATCAAATCATGGGACAAGCCTTCATATACAATTCCTCAGTTATTTCGATATCTCCAAAAGGAGACTGATATTCCCCAACATTAG 864 0.4155 MDPLIRKLRRLLLRWLHRSRSDEYELLKVDECDLLNCSGSVFFVRRISYKEVRKATDSFQRIVYSNSEVSAYAANFGEGCGGVCLVKEVKDFDRGNDESFHKQVQLLGRLHHRHLLSLKGFSLGHDRKSKRLLVFDNIENGSLKEHLNDPLKTPLNWRTRLQIANGVVAALEYLFLFSEPPISHVSISSSNIMLDENFTPKLSDFGLLTGGSSVMVTEDCTGQENRKIIFQLGVLILELVTGQSSEMEELKSLLAVAKLCIKSWDKPSYTIPQLFRYLQKETDIPQH 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06266 287 PANTHER OS01G0253100 PROTEIN 33 260 - -
Vivi2g06266 287 Gene3D Phosphorylase Kinase; domain 1 36 136 - -
Vivi2g06266 287 SUPERFAMILY Protein kinase-like (PK-like) 40 246 IPR011009 -
Vivi2g06266 287 ProSiteProfiles Protein kinase domain profile. 49 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06266 287 Pfam Protein tyrosine and serine/threonine kinase 84 209 IPR001245 GO:0004672|GO:0006468
Vivi2g06266 287 FunFam Protein kinase superfamily protein 35 136 - -
Vivi2g06266 287 SMART tyrkin_6 41 275 IPR020635 GO:0004713|GO:0006468
Vivi2g06266 287 Gene3D Transferase(Phosphotransferase) domain 1 138 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06266 Vivi-Chr2 197493579 197495949 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06266 39 287 Receptor kinase-like Gene Family AT3G19300 32.895 8.61e-45 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Vivi2g06266 PK_Tyr_Ser-Thr 6.3e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06266 - - vvo:131647859 531.946