Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06261 ATGCGATCATTAGCTTCTTCATCGAGTAGGGGTGTTGATTCGGGTTCGAGGGTTAGGAAGAAACATAAGAAGTTGGATGCAATATGCGAGGAAGAGTATAATCGAAACCATGGTGAGTTGAATGAGGGTGATAATTTGAATGAGGAGGGTTCAGGAGTTCGGAGAAGCTCGAGGGTTAGGCGTGTTCCGGTTGTACTGGATGCCTCTCCTTCGCCTAAGAAGAAACGGCAGAGGTTAGGGAAAGATGTAATGGTGAAGAGTGTGGAAGGTGATAAGAATTTAGGGAGAGAAAATGGGGGTTCTGTTGGTTTAAGATGGAGTTTGAGGTCGAGGTCAAGGGGTAAGAATGTGAGTTTTGAAGTGGAGGAGAGAGAATTGCCACGTAGGAAAAGGAAGCTGTTTGATGAGGAGTTGGAGGTTATAGAGGTTGATAAGAATGAGGAATTGGAGGGTGATAGGAAGGAGGAATTGGAGGTTGTAGAGGTTGATAAGAATGAGGAATTGGAGGTTGTGGAGGGTGATAGGAAAGTGGAATTGGAGGTTGTGGAGGGCGATGGGAAGGAGGAATTGGAGGTTGATAAGAAAGTGGAGTTGAAAGGTTATACACGAAAAAGGTCTAGGTCGAAGAGAATGGGGAAATTTGAAGCGACAAAGTATGTAAAAGGGCTTGAGGAAAATGAGTGTCAAGCAGTGGAACTTGTAGTTGTATTGAACCAAGGGGAGGGGAGTGCTTCGGTTCCGGAGACTGAATTGGCTGATGAAAATCCAAAAGATTTGAGAGATGAGAATGCTGCTTCTGAGATGGGGAATGAGGAGAGAATTGAAACTGACAATTTGCAAGCAGAGGAATGTAGTGGCAATGTTGAACCGTCTCTAGTGGAACATGTAGAAACTGTTGATGAACAGGGTGATCAAGTAGAGAGTGAGAAGGAAGAAAAAGATGCAAGTGACGAGGTTGAAATTGCTGGAGTTTCAACTAAACAGGTAGATAATGAAGGTTCTGTTGATAAGGAGGTTCACATCGAAGAAAATATCTCGAAAGATGAGAATATTGGGAGGAAGGATGAGTTGAAACAAGCATCGAAAGACAAGTCTGGGTACCGATGTATCAAAGAGGGCAGACGGTGTGGTTTGTGTGGAAGAGGAAGCGATGGTAAGCCTCCAAAAAGGTTAACTCAGGATAAAGGTGAAAGTGAGAATGAAGCTTATAGCGGCTCATCAGCTTCAGAGCAGCCTACTTATGATACCTGGGATGGTTTTGATGACGAACCTGGTTGGCTTGGGCGTCTTTTGGGCCCTATTAATGATCGTTATGGTATAGCTGGAATATGGGTGCATCAGAATTGTGCTGTATGGAGTCCAGAGGTTTATTTTGCTGGCTTGGGATGCTTAAAAAATGTGAGGGCTGCACTTTGTCGAGGAAGAGCACTGAAGTGCACACGTTGTGGGAGGCGAGGGGCAACCATTGGTTGTCGTGTTGACCGTTGTCCTAAAACTTATCATTTGGCTTGTGCAAGAGCAAATGGTTGCATCTTTGATCATCGGAAGTTTCTTATAGCTTGCACAGATCATCTGCATCTTTTCCAACCTTGTGGTAATAAATATTTAGTCCGGATAAAGAAGTTGAGGGCTAGGAAAATGATGTGGGAGACGAGGAAGCGTTCAAATGATGCTTCAAGAAAGGATATTGATGCAGAAGAGAGATGGTTGGAAAATTGTGGGGAGGATGAAGAATTTTTGAAACGCGAGAACAAGAGGCTTCAACGTGATCTATTGAGAATAGCCCCAATGTATATTGGTGGTTCAGACTCTGCTGGCAGTGAAAACTCATTTCAGGGATGGGAATCTGTTGCTGGGCTTAAAGATGTCATCCGTTGTATGAAAGAAGTTGTTATTATTCCTCTGCTATATCCTGATTTCTTTGATAATTTAGGGCTTACACCTCCAAGAGGCGTTCTTTTGCATGGGTATCCTGGAACAGGGAAAACTTTAGTGGTCCGGTCATTGATAGGTGCATGTGCTCGTGGAGATAGACGGATTGCCTATTTTGCCCGTAAAGGTGCAGATTGCTTGGGGAAATATGTTGGTGATGCTGAGCGTCAACTAAGACTGTTATTTCAAGTTGCTGAAAAATGTCAACCTTCTATTATATTCTTTGATGAGATTGATGGACTGGCACCCTGCCGAACTCCACAGCAAGACCAGACGCATAGTTCTGTCGTATCAACATTGCTTGCCCTTATGGATGGTTTAAAATCTAGGGGCTCAGTTGTGGTCATAGGTGCAACAAACCGTCCTGACGCTGTTGATCCAGCACTTAGGCGCCCTGGAAGATTTGATCGGGAAATTTACTTTCCGTTGCCATCAACTGAAGACAGAGCTTCCATTCTTTCTCTTCACACACAGAAGTGGCCAAAACCAATTAGTGGATCCTTGCTTGGCTGGATTGCAAAGAAAACTTCTGGCTTTGCAGGTGCTGATCTTCAGGCTCTTTGTACCCAAGCGGCTATGAATGCGCTGAAGAGAAATTTCCCTTTGCAAAAGGTTCTATCTGTAGCTGAAAAAAGAAATTCTTCTGGTTGTAAGAACACTCCTCTCCCATCATTTACTGTGGAGGAGAGGGATTGGGTAGAGGCTTTTTCTTCTTCGCCATTACCGTGTTCCCAAAGAGAAGCTGGAAATGCTGCAAATGATGTAGTATGCTCCCCTCTTCCTGTCCAACTTATTCCTTGTTTATTGCGTCCATTATGCACTATTCTTGTATCTCTTTATCTCGATAAACGTCTGTGGTTGCCACTTCCTATATCCAAAGCCATGACATTGATTAAGGATGTAATAATTTCTGCTCTAGACAAAAAGAAAATGCCCATTGATCATTGGTGGTTGCACCTTGATGATTTTCTTCAAGAAACTAATGTTGCTTATGAGATAAGTAAGTGCCTTAGTTTTTCCGGCATTTTATCTGCCAACCATGGTTTTTCCGGTTCTTGCGATATTGTGGATCATGCTGATGACAAACCCTCCATGAAAAACCATGTTAACCTGTGTAATGGTAGATTACCAGACATGGGAATGACCAACAAATCAGGTTTTAGAATATTGATTTATGGTAATCCCCGATCTGGCCAGAGACATCTTGCTTCATGCCTTCTTTACTGCTTTATTGGAAATATTGAAGTACAAAAGATTGATATGGCAACTATTTCACAAGAAGGACATGGAGATATTGTGCAAGGGATTGCACAAATATTAATGAAATGTGCTAGCATGAAATCTTGTGTAATATTCATGCCAAGAATTGATTTGTGGGCTGTGGAGGAGGATTTCAAAACTGCTGAAAAGACGGATTCCTGCTCAATAAATCAACTATCATCTGCAATAGACAAGTCCTGTTTCCCACCCAGCCAAATTGTTGAGAAGGAAAATGGGATCAATACTGGGAAACACCCGGCAGATATGATCGAATCTCAATCCAACAAAAAGGCTTCATATGCCTGGATGACATTTATTGAGCAGGTGGAGTCCATTGGTCTATCCACATCCTTGATGATTCTGGCTACTTCAGAAATTCCATATCCTGAACTTCCACACAAGATAAGAGGATTCTTCAAAAGCTATCAATCAAAGGACAGACAATCAGCTCCTACTGTGCAAACAGTTCCTCAGTTCTCTCTGCAGATTGACGAGAATTTCGATCACGACTTGGCAATCAATCTATCTGCTATAGAGCTTTTAAGAAATGTAACTGAGCAGCGGATTCAATTGATTCATCAGAGATCTCATTCTCACATGGGTGTCCAGAAGCTTGACAGAGCCTTTGAATCAATTGAAGTTTGTAAAGATAATGTCACTCAGAGAAAAGAAAACGAACCAGGCCATGAGAAGAAGGGTGAAGGCCAATTTCCTGAATCCTTGGCCAAAGTTCCCCAACCCAACAACAGTAGGTCGCTAAAAGGAAAGTCGAATCTTTTAATGGCAATATCCACATTTGGCTATCAAATTCTTCTATACCCTCATTTTGCTGAACTTTGCTGGGTCACTTCAAAACTCAAAGAAGGTCCTTGTTCTGATGTGAGTGGGCCTTGGAAGGGCTGGCCTTTTAATTCGTGTATAATCCGTCCTACCAATTCACAAGACAAGGTGGTAATTTCTAGTAGCTCTGGTGGCACTAAAAGCAAAGAAAGTGCCGGTTTAGTTAGAGGCTTGGTTGCTGTTGGTTTATCAGCATACAAAGGTGTTTATAAATCAGTTCGGGAAGTTTCCCTTGAGATAAGGAAAGTACTTGAGATCTTAACTGAGACAATTAACATGAAAATTCGAGCTGGGAGAAACAGACATCAATATCTGCGTATTTTATCCCAAGTGGCTTATTTGGAAGATATGGTCAACAACTGGGCTTATGGATTGTTAAGTCTAGATCAGGCTTCCCCAGAGCTTGCAGCAAAGGTCATACCAGCAGCTGCCGGGTCTTTAAACAGTCATCTTGAATGTGAAGACCGCCACATAGCCGAAGGTGAGGATTGCCATTTGGTTTCTCCTGCTGGTGGTGATGATTTGGAGACACTGGAGAAAAGTCCTAAGGGAGTTCCTACCGTAACAACCGAGCAGCATTCCTTGAACGAAATAAATGATAATTTAGGTGATACTGATTGTGAAGGCCAAAGAATACATTCTGAAGGATCTCCACATAACCATCGCTGTCCAGATACGAATATTATCGACTCTTGTCTTGTAAACCAATCTCTTCATCCATCCCTGAATCAGGAGAATGGGGTGTTATCTGGAGTGTCTGAATCGGTAACTGCTGAAAATCACGAAGCTGCAGGTGGAGAACTTGGAATATCGAAAGACTTGAATAAATCCACATGCACTCGCCCTACAGTCATTTCTGAAAATGGATTTCACACCTGTGAGCAGGAGAATATTGAGATTGGCAATTCTAAATCAAGTGATGTTGAATCTGATAAACATGAGAATACTTTAGATATCAACGCCCGTTCAAGTAAGGACAGTGGTCCAGATGAATCCGGGGTTGTTTGCTTTTACCAATGTTGCCCTCATTGTCTCAGAAGCCTCTATCATTTGACGCGCAAAATACTTGTTCGCGAATGGGGATCAAATAGAAGCCATTGGACAATAGAAGATGTCCACGATGCTGTTTCTACATTATCAGTGGATCTTATTTCAGCGGTTAGAAAGTGTTACATGGCAGAAGAAAAAACTTTCACTGATTTATCCAATAGCAAAACATTTGTTGAATATTCAAACCTGACAACCTGTACTATCGAAAATCGAGGCAAAGATGTTGTGCCGGCTGAATGTGTTTCTCACTTGGCAAGTCAAGATGCTAGCGGGAGTGAAGACGCGTTAACCAATGAACCGGTAAAGCTTGATTTGAAATTTGTTTTCAGAGATGGTGTGCTAGTTCCTATGGACCCTGCAAAGGATACCTCTCTTCACTGTAAATTTGAGAAATTGTGTCTTTGTTCTCTAATAGAGTTGGTAGTGAAAACTAATTGCCCTTTAAATTAA 5532 0.4226 MRSLASSSSRGVDSGSRVRKKHKKLDAICEEEYNRNHGELNEGDNLNEEGSGVRRSSRVRRVPVVLDASPSPKKKRQRLGKDVMVKSVEGDKNLGRENGGSVGLRWSLRSRSRGKNVSFEVEERELPRRKRKLFDEELEVIEVDKNEELEGDRKEELEVVEVDKNEELEVVEGDRKVELEVVEGDGKEELEVDKKVELKGYTRKRSRSKRMGKFEATKYVKGLEENECQAVELVVVLNQGEGSASVPETELADENPKDLRDENAASEMGNEERIETDNLQAEECSGNVEPSLVEHVETVDEQGDQVESEKEEKDASDEVEIAGVSTKQVDNEGSVDKEVHIEENISKDENIGRKDELKQASKDKSGYRCIKEGRRCGLCGRGSDGKPPKRLTQDKGESENEAYSGSSASEQPTYDTWDGFDDEPGWLGRLLGPINDRYGIAGIWVHQNCAVWSPEVYFAGLGCLKNVRAALCRGRALKCTRCGRRGATIGCRVDRCPKTYHLACARANGCIFDHRKFLIACTDHLHLFQPCGNKYLVRIKKLRARKMMWETRKRSNDASRKDIDAEERWLENCGEDEEFLKRENKRLQRDLLRIAPMYIGGSDSAGSENSFQGWESVAGLKDVIRCMKEVVIIPLLYPDFFDNLGLTPPRGVLLHGYPGTGKTLVVRSLIGACARGDRRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTPQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPDAVDPALRRPGRFDREIYFPLPSTEDRASILSLHTQKWPKPISGSLLGWIAKKTSGFAGADLQALCTQAAMNALKRNFPLQKVLSVAEKRNSSGCKNTPLPSFTVEERDWVEAFSSSPLPCSQREAGNAANDVVCSPLPVQLIPCLLRPLCTILVSLYLDKRLWLPLPISKAMTLIKDVIISALDKKKMPIDHWWLHLDDFLQETNVAYEISKCLSFSGILSANHGFSGSCDIVDHADDKPSMKNHVNLCNGRLPDMGMTNKSGFRILIYGNPRSGQRHLASCLLYCFIGNIEVQKIDMATISQEGHGDIVQGIAQILMKCASMKSCVIFMPRIDLWAVEEDFKTAEKTDSCSINQLSSAIDKSCFPPSQIVEKENGINTGKHPADMIESQSNKKASYAWMTFIEQVESIGLSTSLMILATSEIPYPELPHKIRGFFKSYQSKDRQSAPTVQTVPQFSLQIDENFDHDLAINLSAIELLRNVTEQRIQLIHQRSHSHMGVQKLDRAFESIEVCKDNVTQRKENEPGHEKKGEGQFPESLAKVPQPNNSRSLKGKSNLLMAISTFGYQILLYPHFAELCWVTSKLKEGPCSDVSGPWKGWPFNSCIIRPTNSQDKVVISSSSGGTKSKESAGLVRGLVAVGLSAYKGVYKSVREVSLEIRKVLEILTETINMKIRAGRNRHQYLRILSQVAYLEDMVNNWAYGLLSLDQASPELAAKVIPAAAGSLNSHLECEDRHIAEGEDCHLVSPAGGDDLETLEKSPKGVPTVTTEQHSLNEINDNLGDTDCEGQRIHSEGSPHNHRCPDTNIIDSCLVNQSLHPSLNQENGVLSGVSESVTAENHEAAGGELGISKDLNKSTCTRPTVISENGFHTCEQENIEIGNSKSSDVESDKHENTLDINARSSKDSGPDESGVVCFYQCCPHCLRSLYHLTRKILVREWGSNRSHWTIEDVHDAVSTLSVDLISAVRKCYMAEEKTFTDLSNSKTFVEYSNLTTCTIENRGKDVVPAECVSHLASQDASGSEDALTNEPVKLDLKFVFRDGVLVPMDPAKDTSLHCKFEKLCLCSLIELVVKTNCPLN 1843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06261 1843 ProSiteProfiles Extended PHD (ePHD) domain profile. 413 525 IPR034732 -
Vivi2g06261 1843 Pfam AAA+ lid domain 813 845 IPR041569 -
Vivi2g06261 1843 MobiDBLite consensus disorder prediction 298 338 - -
Vivi2g06261 1843 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 788 881 - -
Vivi2g06261 1843 MobiDBLite consensus disorder prediction 381 415 - -
Vivi2g06261 1843 MobiDBLite consensus disorder prediction 71 93 - -
Vivi2g06261 1843 MobiDBLite consensus disorder prediction 1283 1314 - -
Vivi2g06261 1843 MobiDBLite consensus disorder prediction 298 320 - -
Vivi2g06261 1843 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 614 844 IPR027417 -
Vivi2g06261 1843 Gene3D - 613 787 IPR027417 -
Vivi2g06261 1843 MobiDBLite consensus disorder prediction 1645 1674 - -
Vivi2g06261 1843 MobiDBLite consensus disorder prediction 251 279 - -
Vivi2g06261 1843 MobiDBLite consensus disorder prediction 1 101 - -
Vivi2g06261 1843 Gene3D - 788 849 - -
Vivi2g06261 1843 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 371 526 IPR013083 -
Vivi2g06261 1843 MobiDBLite consensus disorder prediction 19 56 - -
Vivi2g06261 1843 MobiDBLite consensus disorder prediction 244 279 - -
Vivi2g06261 1843 MobiDBLite consensus disorder prediction 1283 1301 - -
Vivi2g06261 1843 Pfam ATPase family associated with various cellular activities (AAA) 652 787 IPR003959 GO:0005524|GO:0016887
Vivi2g06261 1843 FunFam ATPase family, AAA domain-containing 2 611 794 - -
Vivi2g06261 1843 Pfam PHD-like zinc-binding domain 446 524 - -
Vivi2g06261 1843 ProSitePatterns AAA-protein family signature. 757 775 IPR003960 GO:0005524|GO:0016887
Vivi2g06261 1843 SMART AAA_5 648 789 IPR003593 GO:0016887
Vivi2g06261 1843 Coils Coil 570 590 - -
Vivi2g06261 1843 PANTHER AAA DOMAIN-CONTAINING 16 1744 IPR045199 -
Vivi2g06261 1843 MobiDBLite consensus disorder prediction 398 414 - -
Vivi2g06261 1843 FunFam P-loop containing nucleoside triphosphate hydrolases superfamily protein 371 527 - -
Vivi2g06261 1843 MobiDBLite consensus disorder prediction 1649 1664 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06261 Vivi-Chr2 197402841 197411449 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06261 614 849 Calmodulin-binding Proteins AT3G56690 40.756 2.60e-44 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06261 - - gmx:100803849 2342.77