Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06212 ATGGAGGATCTTGCAGGTCTAGTTGAGGCAACAGGATCAAGATTCACTTCATTGGAGCTTATTGGACAGGGATCATTTGGCGATGTATATAAAGGGTTTGACAGGGAACTAAACAAAGAAGTTGCCATCAAAGTGATTGATTTGGAAGAATCAGAGGATGACATTGACGATATTCAGAAGGAAGTTTCTGTTCTGTCACAATGTCGATGTCCATATATTACCGAATATTATGGTTCTTTTCTCAACCAGACTAAACTATGGATAATAATGGAGTATATGGCTGGCGGCTCTGTTGCTGATCTACTCCAATCAGGTCCTCCCTTAGATGAAATGTCAATTGCTTACATTCTTCGTGACTTGTTGCATGCTGTCGATTACCTACATAGTGAAGGAAAAATCCATAGAGACATTAAAGCTGCAAACATTTTATTGTCAGAGAATGGTGACGTAAAGGTTGCAGATTTTGGTGTTTCTGCACAGTTGACAAGGACTATATCAAGGAGAAAGACATTTGTAGGAACACCATTCTGGATGGCGCCCGAGGTTATTCAGAACACAGATGGATATAATGAGAAGGCAGATATCTGGTCTCTGGGGATCACTGCAATTGAGATGGCAAAGGGGGAGCCTCCACTTGCTGATCTTCATCCCATGAGGGTGCTTTTCATCATACCCCGAGAAAATCCTCCGCAGCTAGATGAGCATTTTTCTCGCCCCATGAAAGAATTTGTTTCATCATGTTTGAAGAAGGTTCCGGCCGAGAGGCTAAGTGCTAAGGAACTTCTCAAAGACCGTTTTATTCGGAATGCTAGGAAGAGTACAAAGCTTTTGGAAAGAATAAGTAGGGAGCGTCCAAAATTCCAACTTAAAGAAGACCTGGAGACACCTAGAAATGGCTCAAGAGGGATTGGTGAAGGATCTGATACTATGAAAGTGGCAAGAGATTCTAGAGTTGAAGAAAATAATCGACCTAGCAGTCAGGGTAAAACCCTGAAAAGTTCTGAATGGGACTTCAGCATTGGTGAATCAGAGGGTACTGGAACCTTTCGAAATGTTTCACGGCCACCTCAGTCTAGAGATAAGAAAACAGATGTTTCATATAATCAGCTTACCCAAAAAAAAGCTCCAGACGCAGGCTATCAAGGGGGGTATGCCAATAGAATTGCGGCCAATCAATCACTTGATAATCAGCTTGAAGATGATGAATTATCTGGATCAGGAACTGTTGTTATACGCTCTCCCAAAGGAATATCAAGGCCATCTGTGTTTCGTGACCATAGCTCCCAGGATGAATTGTCTGAGAATGGATCAGGAACTGTTGTTATTCGATCTCCGAAGGGATCAAAGCCATCAGTGTTTCGTGATCAGAGCTCTCAGTCCAGCAGCAGCTATGCTTCTTTTGAAGATACTTCTACTAGTGGAACCGTTGTTGTACGTAGCCAGCATGATGATTCTGATTCTCCACGGACTCCAAGATCCCGACTAGGACTTCATGACAGAAGTTCAAATGCTTCACTTGAAGACAGTGCTGCAAACCTAGCCGAGGCAAGGGCTGCTATCCAAGGAGGGTTAAGAAAAGTGAATGCTCGGGAGAGACATCCCCGAGGGAAAATCAATACCGATGTACAGGAAAGCAAAAGAGACCAAATGACCAGCAGCACTGATTCTTCCAGATCATATCGTGAATACATTGATGCACAAAGGGGCAATGTAAGATCGCATCATGCCAGTGATGATGAAGAGAGTGCTAGAACAATATCATCGTCAGCAACATTATCAAGTTTGCTTATTCCTTCATTAAAAGAGGCCGTTGCTGATGATCCAGAAGGGAAAATCGTGCGGGCAGTTATCAATTCTTTAGTAAACATGGAGGGAACAAAGCCTAGATCCTCTGACGTTCTTGTAAAACAATTGCTTCAGAGATTAGCAAGTTCGAACGAAGATTCATTGAAGGACCTGAAAGGACTGGCAAGCCAACTATTCAGCAAAGGCAAGACAACGGAAGAAACGCAAAATGCAGAGGCTGATAACCGAAGGAAACAGCATAACAAGGAACCTCATCCAAATAGCAACTTAAGCCCTCTTGCAAGATTTCTTCTATCAAGATGGCAAGGCCAAACCTCACGGGATCTAAACCATTCTTGA 2145 0.4294 MEDLAGLVEATGSRFTSLELIGQGSFGDVYKGFDRELNKEVAIKVIDLEESEDDIDDIQKEVSVLSQCRCPYITEYYGSFLNQTKLWIIMEYMAGGSVADLLQSGPPLDEMSIAYILRDLLHAVDYLHSEGKIHRDIKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNTDGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRPMKEFVSSCLKKVPAERLSAKELLKDRFIRNARKSTKLLERISRERPKFQLKEDLETPRNGSRGIGEGSDTMKVARDSRVEENNRPSSQGKTLKSSEWDFSIGESEGTGTFRNVSRPPQSRDKKTDVSYNQLTQKKAPDAGYQGGYANRIAANQSLDNQLEDDELSGSGTVVIRSPKGISRPSVFRDHSSQDELSENGSGTVVIRSPKGSKPSVFRDQSSQSSSSYASFEDTSTSGTVVVRSQHDDSDSPRTPRSRLGLHDRSSNASLEDSAANLAEARAAIQGGLRKVNARERHPRGKINTDVQESKRDQMTSSTDSSRSYREYIDAQRGNVRSHHASDDEESARTISSSATLSSLLIPSLKEAVADDPEGKIVRAVINSLVNMEGTKPRSSDVLVKQLLQRLASSNEDSLKDLKGLASQLFSKGKTTEETQNAEADNRRKQHNKEPHPNSNLSPLARFLLSRWQGQTSRDLNHS 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06212 714 MobiDBLite consensus disorder prediction 524 560 - -
Vivi2g06212 714 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06212 714 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06212 714 MobiDBLite consensus disorder prediction 399 508 - -
Vivi2g06212 714 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06212 714 Coils Coil 48 68 - -
Vivi2g06212 714 MobiDBLite consensus disorder prediction 288 366 - -
Vivi2g06212 714 MobiDBLite consensus disorder prediction 323 354 - -
Vivi2g06212 714 MobiDBLite consensus disorder prediction 545 560 - -
Vivi2g06212 714 MobiDBLite consensus disorder prediction 482 496 - -
Vivi2g06212 714 MobiDBLite consensus disorder prediction 566 582 - -
Vivi2g06212 714 SUPERFAMILY Protein kinase-like (PK-like) 13 268 IPR011009 -
Vivi2g06212 714 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 11 663 - -
Vivi2g06212 714 MobiDBLite consensus disorder prediction 432 481 - -
Vivi2g06212 714 Coils Coil 665 685 - -
Vivi2g06212 714 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Vivi2g06212 714 MobiDBLite consensus disorder prediction 526 544 - -
Vivi2g06212 714 MobiDBLite consensus disorder prediction 566 585 - -
Vivi2g06212 714 MobiDBLite consensus disorder prediction 669 686 - -
Vivi2g06212 714 CDD STKc_MST3_like 13 282 - -
Vivi2g06212 714 Gene3D Transferase(Phosphotransferase) domain 1 12 299 - -
Vivi2g06212 714 MobiDBLite consensus disorder prediction 308 322 - -
Vivi2g06212 714 MobiDBLite consensus disorder prediction 661 694 - -
Vivi2g06212 714 FunFam serine/threonine-protein kinase dst1 isoform X1 12 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06212 Vivi-Chr2 196561008 196573629 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06212 1 711 MAP Kinase Kinase Kinase Kinase AT3G15220 60.219 0.0 801
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Vivi2g06212 Pkinase 1.9e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06212 K08838 - gmx:100815042 1082.4