Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06207 ATGGTGGGCTCAGGAGCAACCTCTGAATCTGATAGGAGCAAAGAAGCTGTTGGGATGATGGCCCTTCATGAGGCCCTCCGAACCGTCTGTCTTAACTCTGACTGGACTTACTCTGTCTTCTGGACTATTCGTCCTCGCCCTAGAGTTAGAGGTGGTAATGGCTGCAAGGTTGGTGATGATAACGGTAGCTTGATGTTGATGTGGGAAGATGGATTTTGTAGAGGACGAGGTTCTTCTTCAGGTTGTGTTGAAGATATTGATGCAGAAGATCTTGTTAGAAAAGCTTTCAGCAAAATGTCCATTCAGTTGTATAATTATGGAGAAGGGTTGATGGGGAAAGTTGCATCTGATAAGTGTCACAAATGGGTCTTTAAAGAGCCAACAGAATGTGAACCAAACATCTCTAACTACTGGCAGAGTTCATTTGATGCTCTTCCTCCTGAATGGACAGACCAATTTGAGTCAGGCATTCAGACCATTGCTGTAATCCAAGCTGGCCATGGTCTTCTTCAACTTGGTTCTTGCAAGATTATTCCTGAGGATCTTCATTTTGTTCTAAGAATGAGGCACACATTTGAATCATTAGGCTACCAATCTGGTTTCTATCTCTCACAGCTTTTCTCATCAACAAGGAACACTTCCTCATCAACTTCACTTCCTTCAAAACCATCTTCCACCACCCTTCCAATTAGGCCACCTCCGCCACTCTTCAACTGGGGTCAGAGACCCCTAACTTCTCCTTCATCCATGCTATCCTCACCCAATTTTCAACAACATGCAGCTAGGCTTGGTTTTCCACAAACCAAAGATGAAACACACATGTTTCTCATGCCTCATGCATCATCACATGATCAAGCTCCAAGAATTGAGGACATGATGGGAGGAGAACATCATGACAATGACATTAAATGGCCAAACGGTTTGTCTTTCTTTAACGCTTTAACCGGTAGAGCTGATGATGCTAAGCTTTTGTTTAATCCTGACAACTTAGGAGGAAAACAAAGTGATCATGATCATAATCAAAATCATAATCATAATCAAAATCTTCATCACCCTCTCAATCAAAATCCTAACTCGGATGGTTCAAACCCAAATGAGTTTTTGAGCTTGGATAGTCACCATGATAGTGGAAGAAAAATGGACAAGTTTAAGAGGAGTTTCACTTTACCTACAAGAGTTGCTTCATCATCTTCATCTACTTCAATGGATCATCATCAACAACATCAACAACAAGGTGTGGAGTATAGGAATTCAGAAGGTGGTATGTACTCAGATGTTATGGAGACCTTTTTGGAGTGA 1299 0.418 MVGSGATSESDRSKEAVGMMALHEALRTVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCRGRGSSSGCVEDIDAEDLVRKAFSKMSIQLYNYGEGLMGKVASDKCHKWVFKEPTECEPNISNYWQSSFDALPPEWTDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNTSSSTSLPSKPSSTTLPIRPPPPLFNWGQRPLTSPSSMLSSPNFQQHAARLGFPQTKDETHMFLMPHASSHDQAPRIEDMMGGEHHDNDIKWPNGLSFFNALTGRADDAKLLFNPDNLGGKQSDHDHNQNHNHNQNLHHPLNQNPNSDGSNPNEFLSLDSHHDSGRKMDKFKRSFTLPTRVASSSSSTSMDHHQQHQQQGVEYRNSEGGMYSDVMETFLE 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06207 432 MobiDBLite consensus disorder prediction 389 415 - -
Vivi2g06207 432 MobiDBLite consensus disorder prediction 325 415 - -
Vivi2g06207 432 MobiDBLite consensus disorder prediction 211 233 - -
Vivi2g06207 432 MobiDBLite consensus disorder prediction 346 370 - -
Vivi2g06207 432 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 22 192 IPR025610 -
Vivi2g06207 432 MobiDBLite consensus disorder prediction 371 386 - -
Vivi2g06207 432 PANTHER GB|AAF34833.1 1 432 IPR044170 -
Vivi2g06207 432 MobiDBLite consensus disorder prediction 211 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06207 Vivi-Chr2 196486985 196489541 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06207 23 224 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 31.527 4.84e-20 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06207 - - psat:127086298 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06207 2 196486985 196489541 Vivi2g06207 2 196486985 196489541 ECH