Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06150 ATGGAGAAGAAAGCAGTAGCTGCCTTGTCCTTCCTCTTTCTCGTTCTCTTTGTTGCACAAGAAATTGCGGTGACTGATGCAAAAACTTGTGAGAATTTGTCTGACACATTCAAGGGACCATGCATCCCAGATGGTAACTGTAACAAGCATTGTAAGCAGAAAGAGCACTTACTTAGTGGGAGGTGCAGGGATGATTTTCGCTGTTGGTGCACTAAAAACTGTTAA 225 0.4311 MEKKAVAALSFLFLVLFVAQEIAVTDAKTCENLSDTFKGPCIPDGNCNKHCKQKEHLLSGRCRDDFRCWCTKNC 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06150 74 SUPERFAMILY Scorpion toxin-like 28 74 IPR036574 -
Vivi2g06150 74 Pfam Gamma-thionin family 28 74 - -
Vivi2g06150 74 PANTHER DEFENSIN-LIKE PROTEIN 1 1 74 - -
Vivi2g06150 74 CDD Knot1 39 71 IPR003614 GO:0006952
Vivi2g06150 74 SMART gth_4 29 74 IPR003614 GO:0006952
Vivi2g06150 74 ProSitePatterns Gamma-thionins family signature. 28 51 IPR008176 GO:0006952
Vivi2g06150 74 Gene3D - 28 74 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06150 Vivi-Chr2 195544434 195545562 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06150 1 74 Plant Defensins Gene Families AT5G63660 42.667 4.35e-11 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06150 - - gmx:100779239 121.324