Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06143 ATGAAGAAACCTAAGCAAACCCAAATGAACCCTAACTGGGTTCAACTCAAACAGAAGCTGAATCTTAACGGCTCCAAAGCTTCAAGGACCTATGATTCTGAAGATGACGCACCAAATTCAATATTGGGGAAACGGAAAGAGAGGCTAAATGATGATTCTGATGATTGTGAGGTTAACCCTCTCGATCCTGTAAATGATGATGCAAGTTTGACAGATGCTGTGGCCATGGATTGTGAAATGGTTGGGGTTGGTCAAGGAAACAAAAGTGCCCTTGCAAGAGTATCATTGGTAAACAAGTGGGGCAATGTTATTTACGACGAGTTTGTACGGCCTATGGAGCGGATTGTTGACTACCGTACTAACATTAGTGGCATAAGACCTAAAGATCTGAAAAAAGCAAAGGATTTTTCTACTGCTCAGAAGAAAGTGGCAGAGTTAATCCACGGAAGGATCCTTGTAGGCCATGCCTTGTCCAACGATCTTAAGGCATTGTTATTAAGTCATCCCAAAAAGGATATAAGAGATACATCCGAGTACCCACCGTTTCTAAGGCCAAGTGGTAGAGTAGCATTGCGACATCTAGCTTCAGAACATCTTGGTGCTAAGATTCAAACAGGAGAGCACTGCCCGGTGGATGATGCCCGCGCCGCTATGATGCTTTACCAAAGAAATAGAAGAGAATGGGAGAAGAGCTTAAAAGGCAACTTTCGGAAGCAAAAGAAAAGGAAGAAGAATAAAGATGCCAAAGAATGA 753 0.4276 MKKPKQTQMNPNWVQLKQKLNLNGSKASRTYDSEDDAPNSILGKRKERLNDDSDDCEVNPLDPVNDDASLTDAVAMDCEMVGVGQGNKSALARVSLVNKWGNVIYDEFVRPMERIVDYRTNISGIRPKDLKKAKDFSTAQKKVAELIHGRILVGHALSNDLKALLLSHPKKDIRDTSEYPPFLRPSGRVALRHLASEHLGAKIQTGEHCPVDDARAAMMLYQRNRREWEKSLKGNFRKQKKRKKNKDAKE 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06143 250 Gene3D - 68 248 IPR036397 GO:0003676
Vivi2g06143 250 MobiDBLite consensus disorder prediction 29 55 - -
Vivi2g06143 250 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 38 234 IPR047021 GO:0004527
Vivi2g06143 250 FunFam Interferon-stimulated exonuclease gene 20 69 240 - -
Vivi2g06143 250 MobiDBLite consensus disorder prediction 230 250 - -
Vivi2g06143 250 Pfam Exonuclease 74 221 IPR013520 -
Vivi2g06143 250 SMART exoiiiendus 72 230 IPR013520 -
Vivi2g06143 250 MobiDBLite consensus disorder prediction 24 55 - -
Vivi2g06143 250 MobiDBLite consensus disorder prediction 235 250 - -
Vivi2g06143 250 SUPERFAMILY Ribonuclease H-like 73 227 IPR012337 -
Vivi2g06143 250 CDD REX4_like 74 222 IPR037431 GO:0006364|GO:0008408
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06143 73 227 C2H2 Transcription Factor Family AT5G40310 36.257 5.88e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06143 K18327 - gmx:100819122 387.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06143 2 195428773 195433549 Vivi2g06143 2 195428773 195433549 ECH