Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06136 ATGGCACAGTTACCTCCTAAAATACCAACCATACCCCAAAATTGGCAACATTTTTCTCACCAAAGGGTATCATCATCTTCCACAATGTCAAATATCACCTCCACCACCACAACAACCACTGATCATCAACAAATACCGTCATGGATCGACGAGTTTCTCGACTTCTCCTCGGTAAGACGAGGAGCGCACCGGCGTTCTGCCAGTGACTCCATAGCCTTCCTCGAGACATCTTTTCTCGAGGAAGACGGAAAAAGTGGTGGTGGTGATGGAGATGGTGACTTTGATAGACTGGATGATGAACAATTACTTTCCATGTTCTCTGACAATGTTGGCGGTGGTGTCTCGTTCCCGCCACCGTCAACCTCCAACCCGTCGTCACCGTCGTCTGACCAAAATAGCAACAACCATGAAGAGAAACCAATGGCAATGGTGTTGGATTCTGCACCAGTGCATGAACGTTATCTTTGTCATGAGGTGAAGCCTAAGGATGAAGCTGTGGAAGATGAAAGCTCGTGTAGAATTGAGGAGGAGGGAGCGGCGGCGGCGCCATCTTTTGCTGCAACCATCAGCTGCACTGAAACCGTTGTTGATCCCAAGAGGGTCAAAAGAATTTTGGCAAACCGGCAGTCAGCTCAGAGGTCAAGAGTGAGAAAGCTGCAATACATTTCTGAGCTTGAAAGGAGTGTAACATCTTTGCAGACAGAGGTTTCAGCATTGTCACCACGAGTAGCATTCTTGGACCATCAACGTTTGATTCTCAATGTCGACAATAGTGCCTTAAAGCAAAGGATTGCAGCATTGGCTCAAGATAAGCTTTTCAAAGATGCTCATCAAGAAGCATTAAAGAAGGAAATAGAAAGGTTGAGGCAAATCTACCACCAACAAAACATACAAAAGATGGAGAATTCAATCAATAATAATAACAACAACAATGGTCATTCTCTTCAATCACCACCAACATCACAACCACAACAACACTCTTTCCATAATCACTTGGAATGCAAAGACAAAGAGCAACTCCTCAGTTAA 1029 0.448 MAQLPPKIPTIPQNWQHFSHQRVSSSSTMSNITSTTTTTTDHQQIPSWIDEFLDFSSVRRGAHRRSASDSIAFLETSFLEEDGKSGGGDGDGDFDRLDDEQLLSMFSDNVGGGVSFPPPSTSNPSSPSSDQNSNNHEEKPMAMVLDSAPVHERYLCHEVKPKDEAVEDESSCRIEEEGAAAAPSFAATISCTETVVDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQTEVSALSPRVAFLDHQRLILNVDNSALKQRIAALAQDKLFKDAHQEALKKEIERLRQIYHQQNIQKMENSINNNNNNNGHSLQSPPTSQPQQHSFHNHLECKDKEQLLS 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06136 342 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 202 217 IPR004827 GO:0003700|GO:0006355
Vivi2g06136 342 Coils Coil 278 298 - -
Vivi2g06136 342 PANTHER BASIC LEUCINE ZIPPER 34 1 325 - -
Vivi2g06136 342 MobiDBLite consensus disorder prediction 302 342 - -
Vivi2g06136 342 FunFam Basic leucine zipper 61 198 271 - -
Vivi2g06136 342 SMART brlzneu 195 259 IPR004827 GO:0003700|GO:0006355
Vivi2g06136 342 MobiDBLite consensus disorder prediction 107 136 - -
Vivi2g06136 342 MobiDBLite consensus disorder prediction 114 136 - -
Vivi2g06136 342 MobiDBLite consensus disorder prediction 19 41 - -
Vivi2g06136 342 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 197 249 IPR004827 GO:0003700|GO:0006355
Vivi2g06136 342 Gene3D - 198 270 - -
Vivi2g06136 342 SUPERFAMILY Leucine zipper domain 199 253 IPR046347 GO:0003700|GO:0006355
Vivi2g06136 342 Pfam bZIP transcription factor 199 243 IPR004827 GO:0003700|GO:0006355
Vivi2g06136 342 MobiDBLite consensus disorder prediction 302 328 - -
Vivi2g06136 342 CDD bZIP_plant_RF2 200 250 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06136 Vivi-Chr2 195189835 195193025 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06136 1 277 bZIP Transcription Factor Family AT3G58120 52.703 6.68e-81 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi2g06136 bZIP_1 1.5e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06136 - - gmx:100820197 364.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06136 2 195189835 195193025 Vivi2g06136 2 195189835 195193025 ECH