Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06121 ATGAATGGCGGTGAGATAGTGGAAGTTGACGGCGGTCACATTATACGGTCGCGAGGAAGAAAAGACCGTCACAGTAAAGTTTGCACCGCGAAAGGCCCGAGAGACCGCCGGGTACGGTTATCGGCCCACACCGCTATTGAATTCTACGACGTTCAAGATCGGTTGGGCTTTGACCGGCCCAGTAAAGCCCTTGACTGGCTCATTAATAAAGCAAAGCCCGCCATCGATCAGCTCGCGCAACTTCCTCCATGGAAACCTACTCTTGTTAGTTCTAAACAGCAACAAAACGACGACGTTGAAGAGAAGGAAAACGCTAACGAAAACGAGTTTCGTTTTCTTCAGAACTTTAACGGCAATAATAACAGTAGCAACGGTTTCATTCCGTTTGAAACTGAAACGACGTCGTCTTCGCCGATTCAGTTTCAGAGTTATAATAATAGCACTCCTGATTTGCTTTCGAGAACGAATAGTAATGATTTGCGTCTCTCGCTTCAACAGAATCGGAATCAGAATGTTCAGAATGTTCTATTCGCCGGAAACTTTGATGGAATTCCGATAGCATGGAATTCCGGTTTTGGCGGCGGCGGCGGTGGTGTTGGTGTTGGTGCTATTGATACTGGTAGTGGTGGTGGTAGTAATCATAATCACCATGATGATGATTCAGGTGGAGGTTTTGTGTTTCGTACTCCTTCGCCTTCGCCGGTGGTTTTTCCGGCGGTGATGTATGGTCAGAATCAGTATCTTTCTCAGAGGGGACCCCTTCAGTCCAGTTACAGTCCTTCAGTTCGTGCTTGGATAGATGCTCCGACGTTTGTTGCTGCTGATTATCGACGTCAGGCGGCTGCTACGGGTGCGTTGGGTGCCGGATTTGCTTCTGGTAGCTTTTCTGGCTTCCGTGTGCCGGCGCGAATTGGAGGTGATGATGATGAGGTGCATGGCGGTGTGTCTGAAAGGCCGTCATCTGCTTCCTCTGATTCTCGTCGTTGA 987 0.4894 MNGGEIVEVDGGHIIRSRGRKDRHSKVCTAKGPRDRRVRLSAHTAIEFYDVQDRLGFDRPSKALDWLINKAKPAIDQLAQLPPWKPTLVSSKQQQNDDVEEKENANENEFRFLQNFNGNNNSSNGFIPFETETTSSSPIQFQSYNNSTPDLLSRTNSNDLRLSLQQNRNQNVQNVLFAGNFDGIPIAWNSGFGGGGGGVGVGAIDTGSGGGSNHNHHDDDSGGGFVFRTPSPSPVVFPAVMYGQNQYLSQRGPLQSSYSPSVRAWIDAPTFVAADYRRQAAATGALGAGFASGSFSGFRVPARIGGDDDEVHGGVSERPSSASSDSRR 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06121 328 MobiDBLite consensus disorder prediction 301 328 - -
Vivi2g06121 328 Coils Coil 89 109 - -
Vivi2g06121 328 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 17 255 IPR005333 GO:0003700
Vivi2g06121 328 MobiDBLite consensus disorder prediction 1 26 - -
Vivi2g06121 328 ProSiteProfiles TCP domain profile. 20 78 IPR017887 -
Vivi2g06121 328 Pfam TCP family transcription factor 19 123 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06121 Vivi-Chr2 194992656 194994561 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06121 4 328 TCP Transcription Factor Family AT3G15030 41.250 2.19e-72 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Vivi2g06121 TCP 1.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06121 - - vvo:131653439 550.051