Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi2g06110 | ATGGATCATTTGTGCGATGATAACTTTGAAGGATCTAAGGAAGAAAGACAGATTTTTACAGAGGTCTTTTTTGGTGAATGCACTTTTCAGTCTAGTCAGAGGCGTGTTGTTTCTGGAGCCATCAACCTTGAACATGAATCCACAATCAACACATTCAAATCATTTGGCTCTAGTAATGAAAACTCGATCTTATTGCGTCCCTCGTCATCAAGATTTACACACCATGAGGAGGACATTAATGTAAGTCAGCATTCCAATGAGACTGCCCTGGGGTGCATGCCAGAGAGTTTAACTTGTGAAGACCTGAATGATGAGATTGTAAATGTTAAACGTATGAAGTTTTCTCTACATGAACTTCCTTGTAGTAGATCTAATTCAGAAGATGTTCTGGGTTCTTCGGGAATTCTGAAAGAAGTAATTTCCTTCCCGCCTTGTGCTGCTACAGACTGTGATAGTGACTCAATTGCATTTCGGACAGTTGAATCATCTAAACATGGCGTAGTATCTAGTTGCTGTCTGTTGAAGCATAACTTGGTACAGAATAAACATGCTTCGAATAATGATGTAGATGTTACAAACTGTAAATCTGAATCTGCAAATGGGAACATCACAAAAGAAATGTCTGCAAATAAGGTAGTTGCTTCTCCTGTATCCCAGGAGAGCTCGGCAAACAGGCTAGCTGTAACGAGTTCATCAATCACTGTTGTGAAGAAGTCTTCCTTTCCTTTAAAAACTGAGGAAATGGCAGAAGGGTTTCAATCTTCTAATATGATTATCTCAAATTCAGTGTCAAAGCTAGACAAAGAGGATCCCCGTTTCATACTGCAGTTTCACATTGTGCAGTTGCTTACGTTGTCAGGCTGGTCTATTGGGAAACATCAGCGGCCTTGTAGGCGGTGGATGGAGTCATTCTACAAGACACCAAAGGGAAAAACTATTAGGGAATTTACTAAAGTTTGGAGATTATGTGGCCATCTTTTGTCTGTTGAAAAATGCAAAGTACCATATGAAGGCCGTAAGGAATGGGCGGGTATTAGTGATTTCTGGTCTGATCTATTGAGTACTCTAAAAAATGTTGATAAATCAAAAACCCAGTCAGAAACGACAGCTATGTTGGCTTATCAATGGTGGCTTTTGGATCCTTTTGTAGTAGTCATATATTTCGATAGAAAGATCGGTGCTCTGAAAAAGGGAGAGGTAATAAAAGCATCTAGTAGTTTAGTTTCTAGTAAGGGTAAAATGGCATATGATCCAGTTGATTCAGCATGGGAAGATAGTTCTCGTGCTCATTCTGATCAAAAGCACGGCCAAGCCGTTTTATGTGACTCTTCAACAGCAACTGGAGCCACTAAAATATCTGCTTTAGTGATAAACAATCATGCTTGTAATCAGAAATCTGGTGGCAATCAAGAAGATATGCATGTTGGAGAACACAAACCTAACGTCATTGAAAATCGATGTAGGGAAATGTCAGTGAGCAAAAGTAGCATGGATCTAGTGTCCTTACCTGCTTGTGCATTGGGCAGCACTGTTACCCAATCAAATGCTTCCTCTTTCAATGCTCTTCCAAGCTCAGGAAATTTGGACTTGGATTCTAAAGTGAATGCTGTTCATCAAGATAAACATAGAGATTCCAAAAACATTGATAAGTATACATCAGATAATCGGTCTGAATATAGTGAAGAGGGGAGGAAAATCTCAGTGGCTTCTGTATTTGGGAAAGATAGTACATGGTCCTCATCTAATGGTATTCTTAAAAAGAAAACGCGGAGGAAGTGCAAAAGGATATCTCAAATCAAACTGAGTATGTTATACCATAGTGACATACTGGGATCAACTATCACTGACCAGGTGCAGTCATTGAATGGTGATGCATGTGGCGCTCAAGCTGGTTTGAAAGAAGTTCAGAATTATGTAGTTGACAGTATGGGAAAAAAAAGGAACTGCAAGAAGTTATTGGGCACTGCAAACCAGCGACATATTAGGAAAGCAAATAAGTCCAAGAGGTGCCATATTGAAGACGATGATCTATTAGTGTCAGCAATATTCAAGAATAAGGACTTCAACCCAAAGACAATCCGAGGCAATTCTAGAGCTAAACCTGGCAAGTCAAGGGGTTTGAGAAAGCTTAAAAGCCATAAAGGTCGCTGTAGGTTGCTACCAATGAACCCTTGTTATGGAGGGAAGCACAATAAGGATGGGAAGAAGTATTATCTTGGGGAAAGGACTCTCTTGTCCTGGTTGATTGAGAATAGGGTCATATCTTTAAATGATATCATTCAATATCGAAACCCTAAAGATAATTCTGTCACTAAGGATGGTAAAATCACTAAAGACGGTATTGTTTGTAAGTGTTGCAGTAAAGTGCTTACATTATCAGAGTTCAAGAATCATGCTGGGTTTACAGTGAGTCGCCCTTGCTTGAATCTTTTCATGGAATCTGGTGAGCCCTTTACACTTTGCCTCCTTCAAGCTTGGTCAGCTGAATACAAAACCAGGAAAAGTCAAAATCAAACTGCAAATGTCGTTGATAATGACAGAAATGATGACTCGTGCGGGTTGTGTGGTGAGGGAGGTGAGCTGATATGTTGTGATAACTGCCCTTCTACTTTTCACCTGACTTGTTTGTCCGTTCAGGAGATCCCTGAAGGCAACTGGTACTGCATAAACTGCACTTGTCGGATTTGTGGAAATTTGGTCATTGATAAAGAGGCTTCAGATACACATGATTCATTACAATGTTCTCAATGCGAACAAAAATATCATGAGAAATGCATAGGAGAAGGAGCTAACCAAGAAGGAGCAGTTTCAGACACTTGGTTTTGTAGTCAGAGTTGTCAAGAGGTATACTCTAGTCTCCAATCTCAAGTGGGGCTAGTTAATCAAGTTGCCAATGGCTTTTCATGGACGCTTCTAAGATGCATACACGATGATCAAAAGGTTCATTCTGCTCAGTGGTTATCCCTAAAGGCAGTATGCAATACAAAACTAGCTGTTGCCCTTACCATCATGGAGGAATGTTTTGTGTCAATGTTAGATCTAAGAACAGGCATCCACATGATACCCCAAGTTTTATACAATTGGGGGTCTGATTTTGCTCGCCTGAATTTTCAAGGGTTTTACACCATGGTGTTGGAGAAACAAGATGTATTAATATCTGTAGCATCTATCAGAGTGCATGGGACTACAGCTGCTGAGATGCCTCTAATTGCAACTTGCAGTCGGTATCGTCGCCAAGGAATGTGTCGACTCCTTGTGAACTCAATTGAAGAGATGTTAATATCTGTCAAGGTAGAAAAGCTTGTGGTATCAGCCATTCCTGATTTGGTGGAGACATGGACTAAGGGCTTTGGATTCGTACCTGTAGGTGACATTGAAAAGCGGAGATTAAAAAAGCTCAATTTAATGGTTTTTCCTGGAACAGTATTACTTGAAAAATCCTTGTATGGCAAGAAGAAAAATGAAGGACTGCATGATCAATCAATAGCATCAGATGAATTGTTTGTAGAAATCTGTTCTGAAGGAATGACCATAGCCGAATCATTGCCTCAAGATTTTGGGTATGTAACTACTACCAATGAAGTTGGTGCTAAGTCAGAATATGAACCTGTGGACTGCCAAAATCAACCAGGCAATAGGACTGACAGTGAAACCAACAAAGTTGATAATAATCAAGCAGTTGAAATCATCCCCTTTGAAGGAAACAATGTGCAGGAATTGATAACAAGCAACAGAATGCAAATTGAGAACTGTTTTGCTAACAAAGATGGTACTGAATCAGGTGTAGGACTTATTGAGGACAAGAATATCAAATTAGACAAAGATGGTACTGAATCAGGTGTAGGACTTATTGAGGACAAGAATATCAAATTAGACAAAGTTGAGGAAAATGATTTGCATGAACATGTTTCAAATATGTCATGCAAAACATTTTCCGGCAACAATTTTGACACAGTTTCTAATTTTGAATGCTCAGTGATGTATGATGAAACAGCTAATTTTGGAACATTAGCAAACTCTGCAAAATCAATGGAAAGTTGA | 4041 | 0.3947 | MDHLCDDNFEGSKEERQIFTEVFFGECTFQSSQRRVVSGAINLEHESTINTFKSFGSSNENSILLRPSSSRFTHHEEDINVSQHSNETALGCMPESLTCEDLNDEIVNVKRMKFSLHELPCSRSNSEDVLGSSGILKEVISFPPCAATDCDSDSIAFRTVESSKHGVVSSCCLLKHNLVQNKHASNNDVDVTNCKSESANGNITKEMSANKVVASPVSQESSANRLAVTSSSITVVKKSSFPLKTEEMAEGFQSSNMIISNSVSKLDKEDPRFILQFHIVQLLTLSGWSIGKHQRPCRRWMESFYKTPKGKTIREFTKVWRLCGHLLSVEKCKVPYEGRKEWAGISDFWSDLLSTLKNVDKSKTQSETTAMLAYQWWLLDPFVVVIYFDRKIGALKKGEVIKASSSLVSSKGKMAYDPVDSAWEDSSRAHSDQKHGQAVLCDSSTATGATKISALVINNHACNQKSGGNQEDMHVGEHKPNVIENRCREMSVSKSSMDLVSLPACALGSTVTQSNASSFNALPSSGNLDLDSKVNAVHQDKHRDSKNIDKYTSDNRSEYSEEGRKISVASVFGKDSTWSSSNGILKKKTRRKCKRISQIKLSMLYHSDILGSTITDQVQSLNGDACGAQAGLKEVQNYVVDSMGKKRNCKKLLGTANQRHIRKANKSKRCHIEDDDLLVSAIFKNKDFNPKTIRGNSRAKPGKSRGLRKLKSHKGRCRLLPMNPCYGGKHNKDGKKYYLGERTLLSWLIENRVISLNDIIQYRNPKDNSVTKDGKITKDGIVCKCCSKVLTLSEFKNHAGFTVSRPCLNLFMESGEPFTLCLLQAWSAEYKTRKSQNQTANVVDNDRNDDSCGLCGEGGELICCDNCPSTFHLTCLSVQEIPEGNWYCINCTCRICGNLVIDKEASDTHDSLQCSQCEQKYHEKCIGEGANQEGAVSDTWFCSQSCQEVYSSLQSQVGLVNQVANGFSWTLLRCIHDDQKVHSAQWLSLKAVCNTKLAVALTIMEECFVSMLDLRTGIHMIPQVLYNWGSDFARLNFQGFYTMVLEKQDVLISVASIRVHGTTAAEMPLIATCSRYRRQGMCRLLVNSIEEMLISVKVEKLVVSAIPDLVETWTKGFGFVPVGDIEKRRLKKLNLMVFPGTVLLEKSLYGKKKNEGLHDQSIASDELFVEICSEGMTIAESLPQDFGYVTTTNEVGAKSEYEPVDCQNQPGNRTDSETNKVDNNQAVEIIPFEGNNVQELITSNRMQIENCFANKDGTESGVGLIEDKNIKLDKDGTESGVGLIEDKNIKLDKVEENDLHEHVSNMSCKTFSGNNFDTVSNFECSVMYDETANFGTLANSAKSMES | 1346 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi2g06110 | 1346 | PANTHER | PHD FINGER FAMILY PROTEIN | 4 | 1309 | - | - | |
| Vivi2g06110 | 1346 | Gene3D | - | 996 | 1133 | - | - | |
| Vivi2g06110 | 1346 | SUPERFAMILY | FYVE/PHD zinc finger | 837 | 892 | IPR011011 | - | |
| Vivi2g06110 | 1346 | SUPERFAMILY | FYVE/PHD zinc finger | 892 | 951 | IPR011011 | - | |
| Vivi2g06110 | 1346 | ProSiteProfiles | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 999 | 1149 | IPR000182 | GO:0016747 | |
| Vivi2g06110 | 1346 | MobiDBLite | consensus disorder prediction | 539 | 560 | - | - | |
| Vivi2g06110 | 1346 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 999 | 1125 | IPR016181 | - | |
| Vivi2g06110 | 1346 | Pfam | Tify domain binding domain | 774 | 824 | IPR032308 | - | |
| Vivi2g06110 | 1346 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 841 | 895 | IPR013083 | - | |
| Vivi2g06110 | 1346 | Pfam | PHD-finger | 852 | 893 | IPR019787 | - |
Showing 1 to 10 of 15 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi2g06110 | - | - | mtr:25487250 | 2116.27 |
Showing 1 to 1 of 1 entries