Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06108 ATGGCACTGGCTCCTACATTCATTTCCGTAGCAATATTATTATTATCCAGCCTCAATTTGTTTTCCGTGAATGCAAATTCCTACACAGAATTCCTGCGAAAGGGGCAATCAGTCAGAATATCCGACACATTTGTTTCATACGGTGGAAACTATGAACTTGGATTTTTCAGCAGAGATAGAGACAACTCCACCAAGTACTACGTAGGTATATGGTTCAAAAAGGTACCAAATGACAAGATTGTTTGGGTTGCCAACAGAGATTATGCATTTCAAACATCTTCAGCGTTTCTTATCATTCAACCTGATGGTAACATTGCGATCAGAGACGGACCAATGACATACCTCGTGACCAACGTTTCGAAAAACAGTTATAGTACCTATGCAACGCTGCTGGACTCGGGAAACTTAGTATTGTTGAACAACTCTAACAAAGCTGTTCTATGGCAGAGTTTTAATAATCCAACTGATACTCTTTTACCTGGAATGACAATCGGACACGATATTGACACAGGATACGATTTTTCATTGACATCGTGGACAAGTGCAGACGACCCTGCTATCGGACCATATACTCTCCGATATGATTCCGGTTCAGCGAGTCTAACTGTAAATAAAGGTTCTAATGTCTTGTGGATTGATGGTAATTCCAATTTATCTATTCAGATTGTTTTCAACCGAGCGGGTATGGAACAGGCTAGCTTCAACGACTATTTCACTCTTCCAATTTATAGCCATTCTAGATTTGTATTGGATGTCTCCGGGGATCTTAAATACGAAGATTGGTCAGAGAAATCCAAGCGTTGGATTCCTGTACAGTCATCCAAGTGCGGAGCAAACAATTCGTGCGGAGTATTTTCCATTTGTAATCCACAAGATCACGACCCTTGTCAGTGTCTCAGTGGTTTTGAACCATTTGATGGTGATTCTTGGAGGAAAGGGAACAGATCAGCTGGATGTGTAAGGTTAAAAAACTTGTCCTGCAACACTACAGATGGATTTCTTCGGTTTGTTTCAGGGGAACTACCTCCAAATCATGTGAACGTGAGGCTGGATTCTATAGCACAATGTAACTACACTTGCTTCACCAATTGTTCTTGTGTTGCTTTTGCTTATGATTTGTTTGCTGTTAACTGCATGTTGTGGAGCGACGAAGTACTGACTCTGAAGAACATCTCAACTGATAAAAACCCAAACTTTTTTTATCTCAAACTTGCTGCCTCAGACATACTTACCACAAGTAATGTAACAAATGCAGCTAGCAGACATGGAAAGAGGAAGAAGAATTTAATTATAATTGTTCTTTTGATCTCATTTCTAATATTGCTTATACTGCTTGGCTTATTCGTTTACCAAACAAGAAAGCAAAGTAAGAAAGGGGAAGATTTGCTAAATTTTGAAGTAGGCATGAGCATGAAAGTTAATCAAGACTCTCACAAGGGTACAAAAGTTAAAAGGAAAGAAGTCAAGTTACCATTATTCAGTTTTGTGAGTGTTTCAGCAGCAACGAATAATTTTTCAGACACAAATAAACTCGGCGAAGGTGGCTTTGGACCTGTTTATAAGGGTACACTATTAAATGGTGATGAGGTTGCTGTAAAAAGGCTATCTAAAAGATCAGGTCAAGGATGGGAGGAGTTGCGAAATGAAGCCTTGTTGATTGCAAAACTCCAACACAATAATCTTGTTAGACTTCTTGGTTGCTGCATTGAAAGAGATGAAAAAATGCTTATTTATGAATTCATGGCCAATACAAGTTTGGATTGTTTTCTCTTTGATGCGGAAAAAAGAGAGATGCTAGATTGGGGAACACGGGTTCGAATAATTGAAGGGATTGCACAAGGACTCCTTTATCTGCATCAATATTCTAGGTTCCGGATCATTCACCGAGATTTAAAAGCTAGCAACATTCTGTTAGACACCAACATGAATCCTAAAATATCAGATTTTGGAATGGCGAGGATATTTAGTGAGAATGTTCTTCAAGCAAATACAAACCGGATAGTTGGAACTTATGGATACATGTCTCCTGAATATGCGATGGAAGGCATTTTCTCGATTAAATCCGACGTGTTTAGCTTTGGAGTCCTTTTGTTAGAGATTATAAGTGGCAAGAAGAATACTGGTTTTTATCAAACAAATTCCTTCGATCTTCTTGGATATGCTTGGAATCTATGGACCAACAATTGTGGAATGGACCTTATTGATTCAAAATTGGATGATATCTCCAACAAGCATTTAGTGACAAAATATGTGAACATAGGACTTCTGTGTGTACAACAAAGTCCAGAAGATAGGCCAAGCATGTCTGATGTTGTCTCAATGATTGGCAATGACACTGCATCCCTTCCTAATCCAAAGCCACCAGCATTTCAAAATGTGAGAGGTATGGAAAACTCAAGTCTCTCTACAATCACCAGAGAAAACAATTCTGTCAATGTTGTCACAAACTCAATAGTTGAAGCAAGATGA 2469 0.3876 MALAPTFISVAILLLSSLNLFSVNANSYTEFLRKGQSVRISDTFVSYGGNYELGFFSRDRDNSTKYYVGIWFKKVPNDKIVWVANRDYAFQTSSAFLIIQPDGNIAIRDGPMTYLVTNVSKNSYSTYATLLDSGNLVLLNNSNKAVLWQSFNNPTDTLLPGMTIGHDIDTGYDFSLTSWTSADDPAIGPYTLRYDSGSASLTVNKGSNVLWIDGNSNLSIQIVFNRAGMEQASFNDYFTLPIYSHSRFVLDVSGDLKYEDWSEKSKRWIPVQSSKCGANNSCGVFSICNPQDHDPCQCLSGFEPFDGDSWRKGNRSAGCVRLKNLSCNTTDGFLRFVSGELPPNHVNVRLDSIAQCNYTCFTNCSCVAFAYDLFAVNCMLWSDEVLTLKNISTDKNPNFFYLKLAASDILTTSNVTNAASRHGKRKKNLIIIVLLISFLILLILLGLFVYQTRKQSKKGEDLLNFEVGMSMKVNQDSHKGTKVKRKEVKLPLFSFVSVSAATNNFSDTNKLGEGGFGPVYKGTLLNGDEVAVKRLSKRSGQGWEELRNEALLIAKLQHNNLVRLLGCCIERDEKMLIYEFMANTSLDCFLFDAEKREMLDWGTRVRIIEGIAQGLLYLHQYSRFRIIHRDLKASNILLDTNMNPKISDFGMARIFSENVLQANTNRIVGTYGYMSPEYAMEGIFSIKSDVFSFGVLLLEIISGKKNTGFYQTNSFDLLGYAWNLWTNNCGMDLIDSKLDDISNKHLVTKYVNIGLLCVQQSPEDRPSMSDVVSMIGNDTASLPNPKPPAFQNVRGMENSSLSTITRENNSVNVVTNSIVEAR 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06108 822 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 151 - -
Vivi2g06108 822 ProSiteProfiles Bulb-type lectin domain profile. 29 151 IPR001480 -
Vivi2g06108 822 ProSiteProfiles Protein kinase domain profile. 505 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06108 822 Gene3D - 23 152 IPR036426 -
Vivi2g06108 822 SUPERFAMILY Protein kinase-like (PK-like) 490 800 IPR011009 -
Vivi2g06108 822 Pfam S-locus glycoprotein domain 230 304 IPR000858 GO:0048544
Vivi2g06108 822 Pfam Protein tyrosine and serine/threonine kinase 508 774 IPR001245 GO:0004672|GO:0006468
Vivi2g06108 822 Gene3D Transferase(Phosphotransferase) domain 1 581 783 - -
Vivi2g06108 822 Gene3D Phosphorylase Kinase; domain 1 465 580 - -
Vivi2g06108 822 SMART blect_4 35 154 IPR001480 -
Vivi2g06108 822 Pfam D-mannose binding lectin 80 179 IPR001480 -
Vivi2g06108 822 FunFam Uncharacterized protein 481 580 - -
Vivi2g06108 822 SMART serkin_6 505 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06108 822 CDD B_lectin 43 154 IPR001480 -
Vivi2g06108 822 CDD PAN_AP_plant 324 405 - -
Vivi2g06108 822 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 185 IPR036426 -
Vivi2g06108 822 Pfam PAN-like domain 327 386 IPR003609 -
Vivi2g06108 822 ProSiteProfiles PAN/Apple domain profile. 327 404 IPR003609 -
Vivi2g06108 822 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Vivi2g06108 822 SMART ntp_6 328 404 IPR003609 -
Vivi2g06108 822 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 581 783 - -
Vivi2g06108 822 CDD STKc_IRAK 511 775 - -
Vivi2g06108 822 PIRSF SRK 1 822 IPR024171 GO:0004674
Vivi2g06108 822 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 118 799 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06108 Vivi-Chr2 194775757 194778853 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06108 430 790 Receptor kinase-like Gene Family AT4G23190 53.134 8.40e-124 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi2g06108 PK_Tyr_Ser-Thr 2.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06108 - - psat:127086248 1419.45