Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06054 ATGGAGAATCTGGTTTGGCTTTCTACAAATGGCAAAAAGGCAATGGAAGAAGAGCTTTTAAAAGGACGTGACATGGCAAATCAACTACTTGAAGTACTAACCTATGATGATGATGATGATAAGTCAAATGTTATAAAGGAAGTCAAAGGGTCAAACTCAAAATCATTATCAACCTTAATAGCTGAAGATCTTGTGCGAGAGGTACTCAAATCATTGACAAATACTCTTTTGCTTTTGAACAACAATCAAGACTCCAATGATGTTCCTGGTAGAGATATTTTGGATGGAGCTTACAAGAAACTCAAAATCCTCGACACTAAACATCCAAAAGGGTCGAACAAAAGAAAGTCAATTTCAGCAAGTTGGGAAAAGACTAGCTCAATATTGATTGATGATGGTTATACATGGAGAAAGTACGGACAGAAAAAGATAAGAAATGGCAAATACTACAGGAGCTACTATAGATGCACTCACATGAGCGATCAGCACTGTGAAGCAATGAAACATGTTCAAAGAACTCAAGAGAATCCTCCATTGTATAAGACTACATATTATGCCCATCACACTTGCAAAAGCTCTCTCCATTCCGAACTCATTTTCTCCTCTGATGATTCTTCTGGATTGCTTAGTTTTGATAACAACATTCTAATTAAACAAGAATACCAGCTTCCAGCCCCATTGCCATTGCCACCAATTCATGCTTCAATAAAAGAGGATCCCATGAAAGAGATTCATGCTGATTATTTTGATCAAAATCAATTTTTATTACCCGAGAACATCCTATCATGTAACTTCGAAGTTTATTTCGATTATCTGAAACACACCACTATGCTATTATCAACTGAATCATTTGAAATTGAGAAGGTTTATGATCAGTTTGGATTTTGA 888 0.3592 MENLVWLSTNGKKAMEEELLKGRDMANQLLEVLTYDDDDDKSNVIKEVKGSNSKSLSTLIAEDLVREVLKSLTNTLLLLNNNQDSNDVPGRDILDGAYKKLKILDTKHPKGSNKRKSISASWEKTSSILIDDGYTWRKYGQKKIRNGKYYRSYYRCTHMSDQHCEAMKHVQRTQENPPLYKTTYYAHHTCKSSLHSELIFSSDDSSGLLSFDNNILIKQEYQLPAPLPLPPIHASIKEDPMKEIHADYFDQNQFLLPENILSCNFEVYFDYLKHTTMLLSTESFEIEKVYDQFGF 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06054 295 ProSiteProfiles WRKY domain profile. 125 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi2g06054 295 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 36 201 IPR044810 GO:0003700
Vivi2g06054 295 Gene3D WRKY domain 114 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi2g06054 295 SMART WRKY_cls 130 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi2g06054 295 Pfam WRKY DNA -binding domain 131 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi2g06054 295 SUPERFAMILY WRKY DNA-binding domain 127 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06054 Vivi-Chr2 192891155 192893391 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06054 7 218 WRKY Transcription Factor Family AT5G01900 33.333 5.09e-29 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi2g06054 WRKY 3.1e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06054 - - vvo:131647781 460.299