Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06053 ATGGAGAATCTGGTTTGGTTTTCTACAAATGGTAAAAAGGCAATGGAAGAAGAACTTATAAAAGGACGTGACATGGCAAATCAACTGCTTGAAGTACTAACCTATGATGATGATAAGTCAAATGTTATTAAGGAAGTCAAAGGGTCAAACTCAAAATCATTATCAACCTTAATAGCTGAAGATCTTGTGCGAGAGGTACTCAAATCATTGACAAATACTCTTTTGCTTTTGAACAACAATCAAGACTCTAATGATGTTTCGGGTGGAGCTTACAAGAAACTCAAAACTCTCAACAGTACTAAACATCCAAAAGAGTCGAACAAGAGAAAGTCAACTTCAGCAACTTGGGAAAAGACTAGCTCAATATTGATTGATGATGGTCATACATGGAGAAAGTACGGACAAAAAAAGATAACAAAATCCAAATACTATAGGAGCTACTATAGGTGCACACACAGTGATCAGCATTGTGAAGCAATGAAACATGTTCAGAGAACTCAAGAGAGTCCTCCATTGTATAAGACTACATATTATGCCCGTCACACTTGCAAAAACTCTTTCTATTCCGACCAAAATTTGGAACCGAATTCGCCCTCTGACGACTCTTCGGTGTTGCTTAGTTTTGATAACAACGATTTAATTAAACAAGAATACCAGCTTCCACCACCATTGCCATTGCCACCAATTCTTGCTTCAATAAAAGAGGATCCCATGAAAGAGATTCATGCTGATTATTTTGATCAAAATCAATTTTTATTACCCGAGAACATCCTATCATGTAACTTGGAAGTTTATTTCGATTATCTGAAACATACCACTATGCTATTATCGACTGAATCATTTGAATTTGGGAATGTTTATGATCAGTTTGGATTTTGA 879 0.3595 MENLVWFSTNGKKAMEEELIKGRDMANQLLEVLTYDDDKSNVIKEVKGSNSKSLSTLIAEDLVREVLKSLTNTLLLLNNNQDSNDVSGGAYKKLKTLNSTKHPKESNKRKSTSATWEKTSSILIDDGHTWRKYGQKKITKSKYYRSYYRCTHSDQHCEAMKHVQRTQESPPLYKTTYYARHTCKNSFYSDQNLEPNSPSDDSSVLLSFDNNDLIKQEYQLPPPLPLPPILASIKEDPMKEIHADYFDQNQFLLPENILSCNLEVYFDYLKHTTMLLSTESFEFGNVYDQFGF 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06053 292 MobiDBLite consensus disorder prediction 95 114 - -
Vivi2g06053 292 ProSiteProfiles WRKY domain profile. 119 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi2g06053 292 SUPERFAMILY WRKY DNA-binding domain 120 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi2g06053 292 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 42 192 IPR044810 GO:0003700
Vivi2g06053 292 SMART WRKY_cls 124 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi2g06053 292 Pfam WRKY DNA -binding domain 125 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi2g06053 292 Gene3D WRKY domain 95 185 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi2g06053 292 MobiDBLite consensus disorder prediction 98 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06053 Vivi-Chr2 192847704 192850882 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06053 12 184 WRKY Transcription Factor Family AT5G01900 35.714 2.52e-27 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi2g06053 WRKY 2.2e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06053 - - vvo:131647781 568.155