Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06025 ATGACGTCGGGGACGAGACAACCAACATGGAAGGAGAGAGAGAATAACAAAAGGAGAGAGAGAAGAAGAAGAGCTATAGCTGCGAAGATCTTCTCTGGTTTGAGAATGTTCGGTAACTACAAGCTTCCTAAACATTGTGATAACAATGAAGTTCTCAAAGCTCTCTGTAATGAAGCCGGTTGGATCGTTGAACCGGATGGCACAACGTATCGTAAGGGATGCAAGCCTATGGAGCGCATGGATGTAGTAGGTGGTTCTGCAATGGGAAGTCCATGTTCATCTTACCATCCAAGTCCCTGTGCTTCCTACAACCCAAGCCCTGGATCTTCTTCCTTCCCTAGTCCCCGCTCATCCTCCCACGCTGTAAATCCTAATGGTGACGCCAATTCTCTAATTCCATGGCTCAAAAACCTCTCATCTGGATCATCATCAGCATCCTCTTCCAAGCTTCCGCAGCTATATGTTCATACCGGTTCCATCAGTGCTCCTGTCACTCCTCCGCTTAGCTCTCCGACTGCCCGATCATCTCAGACGAAAGCTGACATCTGGGAGGATCAGTCCACTCGTCCTGGCTGGGGCGGGCAGCAGTACTCCTTCCTGCCTTCCTCCACCCCTCCAAGCCCAGGTCGCCAAGTTCTCGACCCAGATTGGTTTGCTGGGATTAGGATGCCCCAAGGTGGACCAACTTCTCCAACATTTAGCCTAGTGGCTTCTAATCCATTTGGCTTCAGGGAAGAGGTTTTCTGTGGCAGTGACTCCCGCATGTGGACACCTGGACAAAGTGGGACATGTTCTCCAGCTATAGCTGCAGGCTCTGATCATAATGCTGACATACCAATGGCCGAAGCTATTTCAGACGAATTTGCCTTCGGAAACAGTGCAGCTGGTATGGTAAAGCCTTGGGAAGGAGAGAGGATCCATGAAGATTCCGGTTCAGATGATTTAGAGCTCACTCTTGGCAGCTCAAAGACCAGGTAA 978 0.5 MTSGTRQPTWKERENNKRRERRRRAIAAKIFSGLRMFGNYKLPKHCDNNEVLKALCNEAGWIVEPDGTTYRKGCKPMERMDVVGGSAMGSPCSSYHPSPCASYNPSPGSSSFPSPRSSSHAVNPNGDANSLIPWLKNLSSGSSSASSSKLPQLYVHTGSISAPVTPPLSSPTARSSQTKADIWEDQSTRPGWGGQQYSFLPSSTPPSPGRQVLDPDWFAGIRMPQGGPTSPTFSLVASNPFGFREEVFCGSDSRMWTPGQSGTCSPAIAAGSDHNADIPMAEAISDEFAFGNSAAGMVKPWEGERIHEDSGSDDLELTLGSSKTR 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06025 325 MobiDBLite consensus disorder prediction 1 21 - -
Vivi2g06025 325 MobiDBLite consensus disorder prediction 160 209 - -
Vivi2g06025 325 MobiDBLite consensus disorder prediction 303 325 - -
Vivi2g06025 325 MobiDBLite consensus disorder prediction 97 125 - -
Vivi2g06025 325 Pfam BES1/BZR1 plant transcription factor, N-terminal 3 139 IPR008540 -
Vivi2g06025 325 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 325 IPR033264 GO:0003700|GO:0006351|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06025 Vivi-Chr2 192096021 192099900 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06025 1 325 BZR Transcription Factor Family AT1G78700 68.657 5.01e-133 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Vivi2g06025 BES1_N 1e-65 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06025 - - cill:122280541 526.939