Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06015 ATGAAGATGAGCACTACCTCTCCATTTTTCTCCCTTTTAATCATTGCTATTTTGTTCTTATCTCTAACAGCTTTTGGGGCTAATACTCTTCACCCGGACGAAAAGAAAGCTCTTGAAGATATAGCTAAATCACTTGGTAAGAAGGATTGGAACTTCGACATAGATCCATGCAGCAACAAACCTAACTGGTTTACGCCTCCCATACCCAACATCTTAGAAAATAATGTAACCTGTAACTGCTCTGTTCCTGGTGACAACTTCTGCCATGTTATTTCAATAACTTTGAAAGGGCAAAATCTTCCCGGCACTCTCCCGCCAGGACTGACCAGGTTGCGTTACCTTCAAATTATTGACCTCTCTCGCAATTACTTGAATGGTACAATTCCGAGACAATGGGGCTCCATGATGAATATTAGTAAAATTGCTCTTCTCGGAAACCGATTAACGGGTTCAATACCAGCTGAGATTTCAAACATATCTACTCTCCAAACCTTGGAGTTATGGAACAATCAGTTGTCAGGAAATCTTCCTCCTGAACTTGGGTATCTAACCCAAATTAAAACACTGCGACTTTCCTCTAACAATTTTACCGGAGAGCTACCTATGACATTCGTCAAGCTCACTACATTACAAGATTTCCGAATTGAGGACAATCAATTCTCTGGAAAGATACCTGATTATATTCAGAACTGGACAAGTATTAATGCGCTAATGATTCAAGGAAGTGGATTAAGTGGGCCTATTCCTTCTGGAATTTCACTTTTGAGAAACTTAACTGACTTGAGAATTTGTGATTTGGATGGATATGAAGATGCACCTTTGCCACAACTTAATAGTATGACAAATTTAAATACTCTGGTTCTAAGGAACTGCAACATCAGTGGAGAACTGCCTGGTTATCTTGGGACTATGACATTATTAAAACACTTGGACCTCAGCTTTAACAAGTTAAGTGGAATAATTCCAGATTCCTATGCTAACATGAAGAGTTCGAATTACATATTTTTAACTGGAAATCTTCTCACTGGCCCCGTGCGTCGTTGGAGACATTATGTTGACACAGATCTCTCATACAATAATTTCAGCATCAGCCAAGTGAGTCAAAGATGTCAAGATGACAATGTGAACTTGTTTTCTACCTCATGGGCACACAATGACATAGAAACAGTTTCGTGTTTGAGATTTGAATGTCCCAAACCCTCATACTCCCTTTATATAAATTGTGGCGGAAAGCATGCAACAGTCAACAAAACAAGTTATGACGAAGATTCAGACTTATCTAGCCCAGCTAGATTCCATGTCAGTTCAAATGGAAATTGGGCATTTAGCACCACTGGTGAATTCTTAGATAGTCATGATCTCCGTGAAAATTATTCCCCTAAAAATATAGCTAAACTTACTATGGTGGATGCTGAATTGTACATGAATGCACGTGTTTCTCCTATTTCTTTGACTTATTATGGGTTTTGCCTGGCAAATGGAAACTACACAGTAAATCTACATTTTGCTGAAATAATGTTCACAGAAGATCAAACTTATGGTAGTCTTGGAAGGCGTGTATTTGATATCTACCTTCAGGGGAAGGCAGTGCAAAAGGACTTCAATATTGCCAAAGAAGCAGGAGGAGTTGGTAAGAAAATCATAAAACAGTTCAAAGATGTTGTTGTTTCTAGTAATACTTTGGAGATCCGTTTATATTGGGCTGGAAAAGGGACACAGTTTGTCCCAAATAAATCAGTATATGGTCCTCTTATATCGGCTATCTCAGTGGAATCTGACTCTCCACCTGGAACTGGAAGCATATCTGCAGGAGCTGTGGCTGGAATTGTGGTTGCAGCAACAATTGTTATCATTCTTGTATTTGGTATACTTTGGTGGAAAGGATGTTTTGTAAAGAAAAACTCATTGGCAAGAGAACTGAAGAGTTTAGACCTACCAACGGGTTTATTTACCCTAAGGCAAATCAAAGCAGCAACAAACAACTTTGATAATTCCAATAAGATTGGAGCAGGAGGATTTGGTCCTGTCTACAAGGGATGTTTATCCAACGGGACACTGATTGCAGTCAAGCAACTTTCTTCTAAATCAAGGCAGGGAAATCGTGAGTTTTTAAATGAGATAGGCATGATTTCTGCATTGCAACACCCTTATCTTGTTAAACTCCATGGTTGCTGTGTGGAGGGAGATCAGTTGTTGCTGATATATGAATACTTGGAAAACAATAGCCTTGCTCGTGCTTTATTTGGTCCAGAGGAAGAACAAATAAAATTAGACTGGTCTATACGGCAGAAGATTTGTGTTGGTATTGCTAGAGGTTTGACATACCTACATGAAGAGTCAAGACTGAAGGTTGTTCACAGGGACATCAAGGCTACTAATGTGTTGCTTGACAAGGATCTCGACCCTAAGATATCTGATTTTGGTTTGGCCAAACTTGATGAGGAGGATAATACTCACATTAGCACTAGAATTGCAGGGACATATGGATATATGGCTCCTGAATATGCATTGCATGGTTATTTGACGGACAAAGCAGATGTTTATAGTTTTGGAGTTGTTGCCTTGGAAATCGTTAGTGGAAGGAGCAACACCCTTTATCGGACAAAGGAGGAAGCATTCTATCTTCTTGATTGGGCACATATGTTGAAAGAGAGAGGCGACCAAATGGAGCTAGTAGACAGAAGATTAGGTTCAGATTTCAACAAAAAGGAAGCTATGGTGATGATCAATGTGGCTCTCCTATGCACGAATGTCACTTCAAACCTTAGGCCCTCCATGTCGTCGGTGGTAAGTATGCTTGAAGGAAGGATTGTGGTTCCAGAGTTTGTTTCAGATTCAAGTGAAGTAATGGATGAAAAGAAGATGGAAGCAATGAGGCAGTATTACTATCATACGGAAGAAAATAAGATAAGCAAGTCACCATCACAGATTCAGAGTTTATTAAATGATGGGTCATGGACTGCTACATCTTCATCAGGTGTAGACCTTTATTCTGTCCACCCTGATTCTTCCTATTGGGAGAAAAGAAATTAA 3033 0.395 MKMSTTSPFFSLLIIAILFLSLTAFGANTLHPDEKKALEDIAKSLGKKDWNFDIDPCSNKPNWFTPPIPNILENNVTCNCSVPGDNFCHVISITLKGQNLPGTLPPGLTRLRYLQIIDLSRNYLNGTIPRQWGSMMNISKIALLGNRLTGSIPAEISNISTLQTLELWNNQLSGNLPPELGYLTQIKTLRLSSNNFTGELPMTFVKLTTLQDFRIEDNQFSGKIPDYIQNWTSINALMIQGSGLSGPIPSGISLLRNLTDLRICDLDGYEDAPLPQLNSMTNLNTLVLRNCNISGELPGYLGTMTLLKHLDLSFNKLSGIIPDSYANMKSSNYIFLTGNLLTGPVRRWRHYVDTDLSYNNFSISQVSQRCQDDNVNLFSTSWAHNDIETVSCLRFECPKPSYSLYINCGGKHATVNKTSYDEDSDLSSPARFHVSSNGNWAFSTTGEFLDSHDLRENYSPKNIAKLTMVDAELYMNARVSPISLTYYGFCLANGNYTVNLHFAEIMFTEDQTYGSLGRRVFDIYLQGKAVQKDFNIAKEAGGVGKKIIKQFKDVVVSSNTLEIRLYWAGKGTQFVPNKSVYGPLISAISVESDSPPGTGSISAGAVAGIVVAATIVIILVFGILWWKGCFVKKNSLARELKSLDLPTGLFTLRQIKAATNNFDNSNKIGAGGFGPVYKGCLSNGTLIAVKQLSSKSRQGNREFLNEIGMISALQHPYLVKLHGCCVEGDQLLLIYEYLENNSLARALFGPEEEQIKLDWSIRQKICVGIARGLTYLHEESRLKVVHRDIKATNVLLDKDLDPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYALHGYLTDKADVYSFGVVALEIVSGRSNTLYRTKEEAFYLLDWAHMLKERGDQMELVDRRLGSDFNKKEAMVMINVALLCTNVTSNLRPSMSSVVSMLEGRIVVPEFVSDSSEVMDEKKMEAMRQYYYHTEENKISKSPSQIQSLLNDGSWTATSSSGVDLYSVHPDSSYWEKRN 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06015 1010 Gene3D - 401 593 - -
Vivi2g06015 1010 Pfam Leucine rich repeat 281 341 IPR001611 GO:0005515
Vivi2g06015 1010 SUPERFAMILY L domain-like 72 345 - -
Vivi2g06015 1010 SMART serkin_6 662 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06015 1010 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 401 593 - -
Vivi2g06015 1010 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 36 200 - -
Vivi2g06015 1010 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 18 966 - -
Vivi2g06015 1010 SUPERFAMILY Protein kinase-like (PK-like) 645 949 IPR011009 -
Vivi2g06015 1010 Pfam Malectin domain 403 588 IPR021720 -
Vivi2g06015 1010 CDD STKc_IRAK 668 935 - -
Vivi2g06015 1010 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 201 267 - -
Vivi2g06015 1010 ProSitePatterns Serine/Threonine protein kinases active-site signature. 784 796 IPR008271 GO:0004672|GO:0006468
Vivi2g06015 1010 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 631 737 - -
Vivi2g06015 1010 FunFam Putative LRR receptor-like serine/threonine-protein kinase 738 945 - -
Vivi2g06015 1010 Gene3D Ribonuclease Inhibitor 269 384 IPR032675 -
Vivi2g06015 1010 Gene3D Phosphorylase Kinase; domain 1 629 737 - -
Vivi2g06015 1010 Pfam Protein tyrosine and serine/threonine kinase 665 933 IPR001245 GO:0004672|GO:0006468
Vivi2g06015 1010 Gene3D Transferase(Phosphotransferase) domain 1 738 944 - -
Vivi2g06015 1010 ProSiteProfiles Protein kinase domain profile. 662 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06015 1010 Gene3D Ribonuclease Inhibitor 33 201 IPR032675 -
Vivi2g06015 1010 Gene3D Ribonuclease Inhibitor 202 268 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06015 Vivi-Chr2 191675339 191685086 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06015 29 979 Receptor kinase-like Gene Family AT1G53420 54.631 0.0 991
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi2g06015 PK_Tyr_Ser-Thr 1.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06015 - - gmx:732563 1289.25