Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05996 ATGGATAACTATTTGTCCCAATTGAGTCCAGAAATGAATGTTGCAATAACCACAATGCTCTCCCTCATATTAATATACATTACCATGAACTTTCTTTCAATCCAAAGTAGAAAAAACCAAAAATATATTCTCCCACCAGGTCCATCACCATTTGCAATCATGTCACATGTTTTTGAGCTAAGAAAAAATCCACAATACTGTCTAGCAAAATTCTCCACCATGCATGGTCCAATAATGCACTTAAAGCTAGGGCAAATATCAACCGTCGTAATTTCTTCGGCCGATGCCGCACAAGAAGTGCTTCAAACTCATGACCTTTTATTCTCAAACCGAACGGTCCCTCAAGCTGTCGCAGTCCTCGATCACGATATATTTAGCTTACCCTTTATGCCCGTTTGTGATCTTTGGAGAGACCTAAGAAAAATATGCAAAAATGAGTTGTTTTCTAGCCAAACACTTGATGCTAGCCATGCACTTAGGTGTAAGAAGTTACAAGAGATTTTAAGTGAGATTGATAGAAGTAGCTTAGTTGGTGAAGCTGTTGATATTGGAAGAGCTGGTTTTAAGACTACAATGAATTTTTTATCAAACACTTTTTTTTCAAAGGACTTTGCTAACTCTGCAGGTGAAACTGATGAGTATAAGAGTATTATTGAAAATCTTGTGAGTGCAATAGGAACACCAAATTTGGTTGATTTTTTTCCGGTTTTGAAAATGGTTGATCCACAAGGTATAAGAGGAGTTTCAGCAACTTATCTTGATAAGTTGTTGCAAATTATTGACTCTTATATTATCAAAAGGTTGGAGTTAAGAGGAGGAGAAAATTATGTCAAATATGACGATATGTTGGATAATTTGCTTGATATCTCTCAACAGAATGGCCAAAAGATGGATAACACAAAGATTAAACATTTGTTTCTTGATTTATTTGTTGCGGGGACTGATACAACTTCCTACACAATAGAAAAAGCAATGACAGAATTAATTCACAATCCACATGCAATGCTAAAGGTTAAAGAAGAGCTTGCACAAATAATCGGCATAGGAAAAACTGTACAAGAATCCGACATTGTCAAACTTCCATATTTGCAAGCAATAGTAAAAGAAACGTTACGTCTGCATCCATCAGCTCCACTTTTACTACCAAGAAAAGCCAAGATTGACGTACAAATTCAAGGATACACAATTCCACAAGGTGCACAAGTCTTGATTAACAAATGGGCCATGGCAAGAGATCCAAAAATTTGGAATGATGCAAACTCGTTCTCACCTGAAAGATTTTTGGGCTCTGAAATAAATTACAGAGGCCAAAACTTTCAGTTGACACCATTTGGGAGTGGAAGAAGAATATGTCCTGGAATGCCCCTTGCCATTAGGATGTTGCATACCATGTTGGGATCATTGATTAACTTCTTTGATTGGAAACTTGAAAATGGAGTTATGGATATTGATCAACACTTGAGAGCTATTCCCTCTAGGGTAAACAAGGTGGAACATACAATATGA 1506 0.3665 MDNYLSQLSPEMNVAITTMLSLILIYITMNFLSIQSRKNQKYILPPGPSPFAIMSHVFELRKNPQYCLAKFSTMHGPIMHLKLGQISTVVISSADAAQEVLQTHDLLFSNRTVPQAVAVLDHDIFSLPFMPVCDLWRDLRKICKNELFSSQTLDASHALRCKKLQEILSEIDRSSLVGEAVDIGRAGFKTTMNFLSNTFFSKDFANSAGETDEYKSIIENLVSAIGTPNLVDFFPVLKMVDPQGIRGVSATYLDKLLQIIDSYIIKRLELRGGENYVKYDDMLDNLLDISQQNGQKMDNTKIKHLFLDLFVAGTDTTSYTIEKAMTELIHNPHAMLKVKEELAQIIGIGKTVQESDIVKLPYLQAIVKETLRLHPSAPLLLPRKAKIDVQIQGYTIPQGAQVLINKWAMARDPKIWNDANSFSPERFLGSEINYRGQNFQLTPFGSGRRICPGMPLAIRMLHTMLGSLINFFDWKLENGVMDIDQHLRAIPSRVNKVEHTI 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05996 501 FunFam Cytochrome P450 76C4 36 498 - -
Vivi2g05996 501 Pfam Cytochrome P450 45 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05996 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Vivi2g05996 501 SUPERFAMILY Cytochrome P450 45 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05996 501 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05996 501 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05996 501 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05996 501 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05996 501 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05996 501 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05996 501 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05996 501 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05996 501 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05996 501 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05996 501 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05996 501 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05996 501 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05996 501 Gene3D Cytochrome P450 34 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05996 501 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 20 484 - -
Vivi2g05996 501 CDD CYP76-like 75 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05996 Vivi-Chr2 191328951 191331354 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05996 12 495 Cytochrome P450 AT2G45550 40.361 6.43e-138 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05996 - - gmx:100792017 606.29