Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05964 ATGAGCAAGCAGTACCTTGCAAAAGTTTCTTTGAAAATAAATGTTAAGGTTGGGGGTAGGAATACTGTTCTTGTTGATGCACTTTCACGCCACATTCTCCTAGTCAGCAACAGACCTACTATTATATTTGGAGCTGATGTGACTCATCCACACCCTGGTGAAGATTCAAGTCCATCAATAGCAGCTGTTGTTGTTTCTCAAGATTGGCCAGAATTCACCAAGTATGCTGGTTTGGTTTGTGCCCAAGCGCATCGACGGGAATTGATTCAAGACCTTTTAAAACAATGGCAAGATCCAGTCAGAGGAACATTGACTCGTGGAATGATCGAGTATTGTATTTAA 342 0.4152 MSKQYLAKVSLKINVKVGGRNTVLVDALSRHILLVSNRPTIIFGADVTHPHPGEDSSPSIAAVVVSQDWPEFTKYAGLVCAQAHRRELIQDLLKQWQDPVRGTLTRGMIEYCI 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05964 113 Gene3D - 33 113 IPR036397 GO:0003676
Vivi2g05964 113 Gene3D - 1 30 - -
Vivi2g05964 113 ProSiteProfiles Piwi domain profile. 1 113 IPR003165 GO:0003676
Vivi2g05964 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 2 97 - -
Vivi2g05964 113 Pfam Piwi domain 2 95 IPR003165 GO:0003676
Vivi2g05964 113 SUPERFAMILY Ribonuclease H-like 4 94 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05964 Vivi-Chr2 190670436 190671042 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05964 1 110 Eukaryotic Initiation Factors Gene Family AT1G48410 83.636 5.10e-60 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05964 K11593 - vvo:131647733 230.335