Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05948 ATGCAGAAAGATCAACTCAAGAAGGATATTAAAGAGGTCAAGTTTTTCACCGAGTATGGCGAAGCCAATAGATACAAAATTCTGGAAGTTATTGGCAAGGGTAGCTACGGAGTTGTTTGTGCAGCAATTGACACACACACTGGTGGAAAAGTTGCAATCAAGAAGATTCATGATGTTTTTGAACATAACTGCGACGCCATTAGAATTCTGAGGGAAGTCAAGTTGCTTAGGCTTTTAAGACACCCTGATATTGTTGAGATTAAGCGGATTATGTTGCCGCCTTCAAAGAGGGAGTTTAAAGATATTTATGTTGTCTTTGAGCTCATGGAGTCTGATCTCCATCAAGTCATCAAAGCTAACGATGACTTTACCCGTGAACACCAACAGTTTTTTCTTTATCAGATGCTTCGGGCATTGAAGTTTATGCATACAGCAAATGTATATCACAGAGACCTTAAGCCAAAGAATATACTGGCAAATGCAAACTGCAAACTCAAAGTATGTGATTTTGGACTTGCACGAGTTGCATTCCATGATACCCCAGCAACAACTTTTTGGACGGATTATGTTGCTACAAGATGGTATAGAGCCCCTGAATTATGTGGCTCTTTCTTTGCTAAGTACACGCCTGCAATTGATATATGGAGCATTGGATGCATTTTTGCTGAAGTGCTGACAGGAAAGCCACTGTTTCCTGGTAAAAGTATTGTGCATCAATTAGACTTGATCACTGATCTTCTTGGAACACCACCACCTGAAATTATTGCAGGAGTTCGAAATGAGAAGGCGAGGAAGTACTTGATGGATATGCGGAAGAAACTTCCTGTACCATTTGAACGAAAATTTCCAAATGCTGATCCATTGGCACTTCGCCTATTGCAAAGGCTTTTGGCATTCGATCCAAAGGATCGGCCGACAGCTCAAGAGGCACTAGCTGATCCTTTCTTCAAGGGTTTGGCCAGAATTGAGAGAGAACATTCTTCTCCGCCAATTTCAAGAATGGAGTTTGAGTTTGAGAGAAGGCGGGTGTCAAAAGACGATATTAAGGAACTAATATATCGGGAAATACTGGAATATCATCCACAGCTCCTTAAAGATTACAAAAATGGAACTGAAGGCACGAGCTTCATGTACCCTAGTGCAATAGACCAGTTCAGAAAGCAATTTGCTTATCTAGAAGAGAATAATGCTAAATCTGGTCCGGTGATTCCTCCAGCAAGGAAGCATGTCTCCCTTCCAAGGTCCACTGTTCTCTCTAGTACAATTCCTCCCAGCACGCAACCATCTTTTACTCCGAATGCCAACAAACATATTGCACAAGAGGCATTCAAAATTTCGAGAGCCGCAGAATCAAATTCTGTAAGTCAATCAAAGGGTTTACGACCTCCTCCAAGAGCGCCAGCAGCCAAACCAGGTAGAAGTATAGGGCCAGTTCACTGCGACAATGGGAGAAGCACAAAAGATAATTATGATGCAAGAATCTTCTACCAAAATACTATTCCTCAATCAATCTCTCCACACCCTTTCCAAAGGGTTGTACACTCACAACAAATTTATAAGGATAATTCAGAAGGCAAACATCAACTCTCACCACAGAAGCGTAGCGTGCCAGCCAGACCAGCTATCGATCTTAATACCAATCCATACCACCAGCAGGCCAAGAATGATCTGTTAAACGATCCTGTCACCGTTATTGACGCTAAATTGTTGCATGCACAATCTCAATTTGGTGCAGCTGGTGCTGCAGCAGTCGCTGTTGCTGCTCACAGGCACTCTGCAGGCTTTTAG 1788 0.4239 MQKDQLKKDIKEVKFFTEYGEANRYKILEVIGKGSYGVVCAAIDTHTGGKVAIKKIHDVFEHNCDAIRILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDFTREHQQFFLYQMLRALKFMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFHDTPATTFWTDYVATRWYRAPELCGSFFAKYTPAIDIWSIGCIFAEVLTGKPLFPGKSIVHQLDLITDLLGTPPPEIIAGVRNEKARKYLMDMRKKLPVPFERKFPNADPLALRLLQRLLAFDPKDRPTAQEALADPFFKGLARIEREHSSPPISRMEFEFERRRVSKDDIKELIYREILEYHPQLLKDYKNGTEGTSFMYPSAIDQFRKQFAYLEENNAKSGPVIPPARKHVSLPRSTVLSSTIPPSTQPSFTPNANKHIAQEAFKISRAAESNSVSQSKGLRPPPRAPAAKPGRSIGPVHCDNGRSTKDNYDARIFYQNTIPQSISPHPFQRVVHSQQIYKDNSEGKHQLSPQKRSVPARPAIDLNTNPYHQQAKNDLLNDPVTVIDAKLLHAQSQFGAAGAAAVAVAAHRHSAGF 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05948 595 MobiDBLite consensus disorder prediction 413 433 - -
Vivi2g05948 595 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g05948 595 MobiDBLite consensus disorder prediction 520 542 - -
Vivi2g05948 595 MobiDBLite consensus disorder prediction 398 433 - -
Vivi2g05948 595 MobiDBLite consensus disorder prediction 448 486 - -
Vivi2g05948 595 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Vivi2g05948 595 FunFam Mitogen-activated protein kinase 14 119 - -
Vivi2g05948 595 FunFam Mitogen-activated protein kinase 111 339 - -
Vivi2g05948 595 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Vivi2g05948 595 CDD STKc_TDY_MAPK 24 361 - -
Vivi2g05948 595 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g05948 595 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 369 - -
Vivi2g05948 595 SUPERFAMILY Protein kinase-like (PK-like) 19 319 IPR011009 -
Vivi2g05948 595 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Vivi2g05948 595 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g05948 595 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05948 Vivi-Chr2 190263707 190268546 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05948 1 591 MAP Kinase Gene Family AT1G53510 67.980 0.0 771
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Vivi2g05948 Pkinase 4.4e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05948 - - gmx:100800878 988.408