Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05945 ATGGCAGAAGACACAGATTCACGAAAGCAAGCCAGGCTAGCCATTTTGGAGCTAGCCAACATGATAAGCGTCCCTATGTCCTTAAACGCCGTCGTACGCCTCAACGTTGCCGACGCAATCTGGGAAAGTGGTTCCAACGCGCCTCTCACTGCCGCTCAGATCCTCGCGCGTGTAATTCCAACCGGTGGCGGCGACGCCGAGAATCTCCAGCGCGTGCTACGCATGCTCGCTAGTTATGGTGTGTTTGAAGAGGTTATTGCTGGCGGTGAAAGGAAGTACTCGCTGACGGACGTTGGGAAAACTCTTGTCACCGATGAAGAAGGTTTGTCGTATGGCGCTTACGTGCTCCAACATCACCAGGATGCGTTGATGAGAGCATGGCCATTGGTACATGAAGCAGTTGTGGACCCATCAAAGGAGCCATTTGAGAGGGCAAATGGAGAAGGAGCATATGATTATTACCTAAAGAAACCAGAGATGAATGAGTTAATGTTGAAGGCCATGTCAGGGGTATCAGTGCCTTTCATGAAAGCCCTTTTGGGGAGTTACAATGGGTTTCAAAATGTGGAGAAGCTGGTTGATGTTGGTGGCAGTGGTGGTGATTGTCTCAGAATGATCTTGCAGAAATATCCTAATATTAAAAAAGGGTTGAACTTTGATCTTCCTGAAGTTGTGGCCAAAGCACCACAAATTCCAGGTGTAACTCATGTGGGTGGTGACATGTTCCAGTACATTCCACAAGCAGATGCTATTTTCATGAAGTGGGTGCTAACAACATGGACAGACAAAGAGGTCAAACACATAATGTCAAACTGTTACAAGGCACTCCCAGCAGGAGGAAAGCTAATTGCCTGTGAGCCTGTGTTGCCGGAGGATTCAGATGATAGTCACAGAACAAGGGCATTGCTTGAGGGTGACATTTTTGTGATGACGATTTACAGAGCCAAAGGAAAGCATAGGACTGAAGAACAGTTTAAGCGGCTTGCAATTTCAGCAGGTTTCAATCTTTTCAAAGCCTTTCATGTAGATCATTTCTACGCTGTTCTTGAGTTTCAGAAATGA 1062 0.468 MAEDTDSRKQARLAILELANMISVPMSLNAVVRLNVADAIWESGSNAPLTAAQILARVIPTGGGDAENLQRVLRMLASYGVFEEVIAGGERKYSLTDVGKTLVTDEEGLSYGAYVLQHHQDALMRAWPLVHEAVVDPSKEPFERANGEGAYDYYLKKPEMNELMLKAMSGVSVPFMKALLGSYNGFQNVEKLVDVGGSGGDCLRMILQKYPNIKKGLNFDLPEVVAKAPQIPGVTHVGGDMFQYIPQADAIFMKWVLTTWTDKEVKHIMSNCYKALPAGGKLIACEPVLPEDSDDSHRTRALLEGDIFVMTIYRAKGKHRTEEQFKRLAISAGFNLFKAFHVDHFYAVLEFQK 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05945 353 SUPERFAMILY "Winged helix" DNA-binding domain 7 105 IPR036390 -
Vivi2g05945 353 PIRSF O-mtase 1 353 IPR016461 GO:0008168
Vivi2g05945 353 Gene3D Vaccinia Virus protein VP39 107 353 IPR029063 -
Vivi2g05945 353 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 16 353 IPR016461 GO:0008168
Vivi2g05945 353 Pfam O-methyltransferase domain 131 335 IPR001077 GO:0008171
Vivi2g05945 353 PANTHER O-METHYLTRANSFERASE 18 340 IPR016461 GO:0008168
Vivi2g05945 353 Gene3D - 1 106 IPR036388 -
Vivi2g05945 353 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 108 351 IPR029063 -
Vivi2g05945 353 FunFam Caffeic acid 3-O-methyltransferase 108 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05945 Vivi-Chr2 190209284 190213544 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05945 3 353 Monolignol Biosynthesis Gene Families AT3G53140 73.315 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05945 - - gmx:100784957 602.823