Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05906 ATGGAATGGCTTTCTGGCATAATTTTCACCCTGTTGACACTTGGTTTGATATGTGCTTGGAAGGTGCTGAATTCGTTGTGGCTGACGCCAAAGAAGCTAGAGAAGCTGTTAAGAGAACAAGGCATTCATGGAAACTCATATAGGTTTTTGGTTGGAGATGCTAAGGATCTTTTTAAGATGGGAAAGGAAGCTAAATCCAAACCCATGAATCTCTCCGATGATATTATTCCACGTGTCGATCCCTACACCCAACAGACTCTTAAAAATCATGGGAAGAATTCTTATATTTGGTTTGGACCAAAGCCAAGGATTTTTCTCACAAAACCTGAGCAAATAAAAGATGTATTGAATAAGATGTCTGAATTCCCAAAGAGAAGTAATCCAAGTTTCAAGTCTCTAGTTAATGGTCTTTCTAGCCATGAAGGAGAAAAGTGGAGCAAGCATAGAAGGCTAATCAACCCGGCTTTCAAATTAGAAAAATTAAAGATTATGACACCATCTTTCTTTACAAGTTGCAATGATATGATTAGCCAATGGGAGAAACTGTTGTCTTTAGAAGAATCTTGTGAAATAGATATATGGCCTTCTTTTCAAAACTTGACTAGCGATGCTATTTCTCGAACAGCATTTGGAAGTAGTTATGAAGAAGGAAAAACAATCTTTGAACTTCAAAGAGAGCTAGCTGAACTTATTGTAAAAGATACAGTGAAATCTTTCATCCCTTTATGGAGATTTGTACCTACTATCGCCCATAGAAAGATGAACGAAATTGAGAGAAATATACAATCTTCTCTTAAAGATATCATTAACAAGAAGGAGAAAGCACTAAAGATAGGTGAATCTACTACAAATGATTTATTGAGTATTCTTCTCGAGTCAAATCATAAGGAAATTGAAGAAAATACAAACAACAAGAATGTAGGAATGACTCTTGATGATGTAGTGGGGGAATGCAAGTTATTTTATTTTGCAGGACAAGAAACTACTTCAGTTTTGCTTGTTTGGACTATGATATTGTTGAGTAGGTATCCAAATTGGCAAGAGCGTGCAAGGGCAGAGGTGTTACAAATCTTTGGAAATAAAAAACCAGATTTTGATGGCCTAAATAGTTTGAAGATTGTCACCATGATTTTGTATGAGGTTCTTAGGTTGTACCCTCCTCTAGTTGGCTTTGTTCGCCAGGTTGAGAAAGATGTCAAACTTGGAAACCTTATATTACCGGCTGGAGTGGAAGTTTTCTTACCAGTTCTTTTGATTCACCATGACTGCGAACTATGGGGCGATGACGCTAAGATGTTCAATCCAGAAAGATTTTCTGAAGGTGTTTTAAAAGCAACAAATGGAAGACATTCATTTTTTCCATTTGGTGGGGGTCCTAGAATTTGCATTGGACAAAACTTTGCAGTGATGGAAGCAAAAATGGCAGTAGCAATGATTTTGCAACATTTCTCATTCGAGCTTTCACCAACCTATGCTCATGCTCCATCCACTATACTTACTCTTCAACCACAACATGGTGCTCAAATTATTATACGCAAAGTGAAAACATAA 1551 0.3694 MEWLSGIIFTLLTLGLICAWKVLNSLWLTPKKLEKLLREQGIHGNSYRFLVGDAKDLFKMGKEAKSKPMNLSDDIIPRVDPYTQQTLKNHGKNSYIWFGPKPRIFLTKPEQIKDVLNKMSEFPKRSNPSFKSLVNGLSSHEGEKWSKHRRLINPAFKLEKLKIMTPSFFTSCNDMISQWEKLLSLEESCEIDIWPSFQNLTSDAISRTAFGSSYEEGKTIFELQRELAELIVKDTVKSFIPLWRFVPTIAHRKMNEIERNIQSSLKDIINKKEKALKIGESTTNDLLSILLESNHKEIEENTNNKNVGMTLDDVVGECKLFYFAGQETTSVLLVWTMILLSRYPNWQERARAEVLQIFGNKKPDFDGLNSLKIVTMILYEVLRLYPPLVGFVRQVEKDVKLGNLILPAGVEVFLPVLLIHHDCELWGDDAKMFNPERFSEGVLKATNGRHSFFPFGGGPRICIGQNFAVMEAKMAVAMILQHFSFELSPTYAHAPSTILTLQPQHGAQIIIRKVKT 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05906 516 Coils Coil 254 274 - -
Vivi2g05906 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Vivi2g05906 516 FunFam Cytochrome P450 734A1 27 515 - -
Vivi2g05906 516 PRINTS E-class P450 group I signature 200 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05906 516 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05906 516 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05906 516 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05906 516 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05906 516 PRINTS E-class P450 group I signature 87 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05906 516 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05906 516 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05906 516 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05906 516 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05906 516 CDD CYP72 80 510 - -
Vivi2g05906 516 Gene3D Cytochrome P450 27 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05906 516 SUPERFAMILY Cytochrome P450 81 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05906 516 Pfam Cytochrome P450 84 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi2g05906 516 PANTHER CYTOCHROME P450 FAMILY MEMBER 17 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05906 Vivi-Chr2 189662952 189666008 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05906 20 514 Cytochrome P450 AT3G14690 54.326 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05906 - K23809 gmx:100808323 744.191