Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05885 ATGGATGAAGTTGTCACACAAAGAACAGAGACCCGTCCGCTCCGTGGTGCAGGGAACAGTAGCTTGCCAAACTTCATAAGGAGATGGAACAGGCTTTTAGCCATCTTTTGCTTGGTTTCAATATTTATTGATCCTTTGTTTTTCTTCACTATTCATGTGAACAAGGAAACCAAATGTATTCCTATAAACTGGGTAATAGCAAAAGCTCTGGTTGGAATGAGAAGCATAACCGACTTTGTATTTTTATTAAACATTCTTCTTCAGATATTATTCTTATTTCTCCTGCCAAATCCCTCCAAGTCAGATGGAGAACAGCATGCAAAGAAGCTTCTTATCATATTGATCCTTGTCCAGTATATTCTCCGGCTGTTCAGATTTCTACCTCTGCTGATTGGCCAGTCTCCATCTGGTTTTATATTTAAGTCTGCTTGGGCCAATGTCATCATAAATCTTCTCTTTTTCATGCTATTTAGCCATATCGTTGGTTCATGCTGGTACCTCTTTGCTCTACAGAGGGTTGACCAGTGTTTGATAGAAGCCTGCCACCTTGCCGATCTACCTTTATGCAAGCCATTGATAGACTGTAATTCTAATTTTCCGGCTATATCCGCTGCATGGGGAGCTGATTTAGGTGCAGGAAATTGTTTTAACGTCACATCTGGTGATTTTTCGTACGGAATATATGGGAATGCTCTACCGCTGACCGTACAAGCCAGTGTGACCGGCAAATATATCTATTCCCTCTTTTGGGGATTTCAGCAACTTAGCACCCTGGCAGGAAATCTGACCCCCAACCATTTTGTGTGGGAGGTCATGTTCACCATGTCCATCATTGGATTGGGACTCTCCCTTTTCGCAGTCCTCATTGCAAACATTCATAATTTTCTCCAAGGTCTCGCACGAAGGAGGCTCGAGATGCAGCTCCGAAGCCGTGACGTGGAGCATTGGATGGGCCGTCGTGGCTTATCTGAAGATCTCAGAAGGAGAATTAGAGAAGCCGAACAGAATGCTTGGGAAGAAACACGAGGTGTTCCGGATGAAATGATTCTCCGGAACTTGCCAGAGGGACTCGTGACTGACATACGTCAGTTCCAAGAGAATGCCGATCATTCTGTTTAG 1119 0.4388 MDEVVTQRTETRPLRGAGNSSLPNFIRRWNRLLAIFCLVSIFIDPLFFFTIHVNKETKCIPINWVIAKALVGMRSITDFVFLLNILLQILFLFLLPNPSKSDGEQHAKKLLIILILVQYILRLFRFLPLLIGQSPSGFIFKSAWANVIINLLFFMLFSHIVGSCWYLFALQRVDQCLIEACHLADLPLCKPLIDCNSNFPAISAAWGADLGAGNCFNVTSGDFSYGIYGNALPLTVQASVTGKYIYSLFWGFQQLSTLAGNLTPNHFVWEVMFTMSIIGLGLSLFAVLIANIHNFLQGLARRRLEMQLRSRDVEHWMGRRGLSEDLRRRIREAEQNAWEETRGVPDEMILRNLPEGLVTDIRQFQENADHSV 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05885 372 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 24 89 - -
Vivi2g05885 372 Gene3D - 19 299 - -
Vivi2g05885 372 Pfam Ion transport protein 35 302 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Vivi2g05885 372 Gene3D Helix hairpin bin 301 363 - -
Vivi2g05885 372 SUPERFAMILY Voltage-gated potassium channels 24 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05885 Vivi-Chr2 189337904 189340422 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05885 26 363 Ion Channels AT3G17700 46.373 1.25e-103 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05885 K05391 - vvo:131635595 550.821