Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi2g05881 | ATGGAGATTAAGGATCAAGTTGAAGGCACAAAGTCTGCTATAATCGGCGCAGTTAGTAAGTGTCATTCCAAAGGTAGAGCAGTGTCTGAAAATGTTGCGAAGTCGCAGGATATACCTTCTGTTGGAAATGACCAGACTCCCAAGGCGAGGAAGCCGTATACCATCACTAAACAAAGGGAGAAGTGGACTGAAGAAGAACATCAAAAATTCGTCGAGGCTTTGAAATTATATGGCCGTGGCTGGCGTCAAATTGAAGAACATATAGGATCCAAAACTGCAGTTCAGATTCGAAGCCATGCTCAAAAGTTTTTCTCTAAGGTTGTGCGGGAACCTGATGGCAGCGCTGAAAGTCCTATTCAGCCAATTGACATACCTCCTCCTCGGCCGAAGAGGAAACCTCTTCATCCGTACCCTCGCAAACCTGTTGACTCTTTCAAAGGGCAGTCCGTCCTAAATGAATCGGAAACATCTCCATCGATTAACTTGTCAGTTGCCGAAAACAACACCCAATCTCCAACCTCGGTACTATCTGCATTTGGTTCGGAAGCATTCGGGTCAGCAGCATTTTCTGAACAGGCAAACAGATGCCTTTCTCCAAACTCTTGTACCACTGAGATTCACCCAGTCAGCTTGTCGCCTCTTGAAAAAGAAAACGATTGCCAGACATCGAAATCCTCCGAGGAGGAAGAGAAAGGAACTCCAGCTTCAGTTCCTTTATCCACTGACTTAAAACCAATTATATGCACGAAGTCGGAGATTATTTCTTCGGAAGAAACTCAATGTTTCAAGGAAGATGCTGCGAATATGCCACAGATCACTAGTATTAAGCTGTTTGGCAGAACAGTCTCTATGGTTGATACTCAGAAAACAATAGACATCAAATCTGATGAAACTGTTGAGAATGAGAAAGCTGGCTTAGAAGAGGAATCAGAGAAACTTGTTACACAGCTATCACTAGGCATGTGTAGTGGTAATTGTCAAAGTATGGAACAACAGAAGGAGAATCCGTGCAGTGTTGGCGAATGCGGATCATCTTTACCGTGTTGGAGTTTGTACCAAGGCCTTCCAGCTTTGAGCCTCAAGCCATGCAATCATCAGATTTTAAGTCCTGTGCCTGTCAGGCCTTGTTTGAAGGTAAGAACTCGAGAGGAGGAAAGTTCTTGCACTGGTTCTAATACCGGATCAGTTTGTGATATGGAAAATCAAAGCAAGAACAATTCATCAGATACTGATGATACTCAAAGTCGAAAACACCAACATGAAGGAGTGTTCCTTAAGAAATCTGGAAGAGGGTTTGTACCATATAAAAGATGTGTATCCGAAAGAGACGAAAATTCTTTAATTGTTGGGTTGGAAGAAAGAGAAGGGCAAAGGGCTCGTGTGTGTTCATAG | 1392 | 0.4332 | MEIKDQVEGTKSAIIGAVSKCHSKGRAVSENVAKSQDIPSVGNDQTPKARKPYTITKQREKWTEEEHQKFVEALKLYGRGWRQIEEHIGSKTAVQIRSHAQKFFSKVVREPDGSAESPIQPIDIPPPRPKRKPLHPYPRKPVDSFKGQSVLNESETSPSINLSVAENNTQSPTSVLSAFGSEAFGSAAFSEQANRCLSPNSCTTEIHPVSLSPLEKENDCQTSKSSEEEEKGTPASVPLSTDLKPIICTKSEIISSEETQCFKEDAANMPQITSIKLFGRTVSMVDTQKTIDIKSDETVENEKAGLEEESEKLVTQLSLGMCSGNCQSMEQQKENPCSVGECGSSLPCWSLYQGLPALSLKPCNHQILSPVPVRPCLKVRTREEESSCTGSNTGSVCDMENQSKNNSSDTDDTQSRKHQHEGVFLKKSGRGFVPYKRCVSERDENSLIVGLEEREGQRARVCS | 463 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi2g05881 | 463 | CDD | SANT | 61 | 104 | IPR001005 | - | |
Vivi2g05881 | 463 | MobiDBLite | consensus disorder prediction | 108 | 158 | - | - | |
Vivi2g05881 | 463 | MobiDBLite | consensus disorder prediction | 208 | 240 | - | - | |
Vivi2g05881 | 463 | MobiDBLite | consensus disorder prediction | 386 | 409 | - | - | |
Vivi2g05881 | 463 | MobiDBLite | consensus disorder prediction | 29 | 52 | - | - | |
Vivi2g05881 | 463 | SUPERFAMILY | Homeodomain-like | 53 | 107 | IPR009057 | - | |
Vivi2g05881 | 463 | MobiDBLite | consensus disorder prediction | 386 | 423 | - | - | |
Vivi2g05881 | 463 | Gene3D | - | 61 | 108 | - | - | |
Vivi2g05881 | 463 | Coils | Coil | 296 | 316 | - | - | |
Vivi2g05881 | 463 | PANTHER | SWI/SNF COMPLEX-RELATED | 33 | 299 | - | - | |
Vivi2g05881 | 463 | MobiDBLite | consensus disorder prediction | 29 | 61 | - | - | |
Vivi2g05881 | 463 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 57 | 106 | IPR006447 | GO:0003677 | |
Vivi2g05881 | 463 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 54 | 108 | IPR017930 | - | |
Vivi2g05881 | 463 | FunFam | protein REVEILLE 6 isoform X1 | 61 | 109 | - | - | |
Vivi2g05881 | 463 | ProSiteProfiles | SANT domain profile. | 57 | 108 | IPR017884 | - | |
Vivi2g05881 | 463 | Pfam | Myb-like DNA-binding domain | 59 | 102 | IPR001005 | - | |
Vivi2g05881 | 463 | ProSiteProfiles | Myb-like domain profile. | 54 | 104 | IPR001005 | - | |
Vivi2g05881 | 463 | SMART | sant | 58 | 106 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi2g05881 | Vivi-Chr2 | 189124814 | 189128273 | Dispersed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Vivi2g05881 | Myb_DNA-binding | 3.7e-13 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi2g05881 | - | - | gmx:778089 | 567 |