Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05868 ATGCTTTTACTTGAATCAGTGCAACCTAATTTTGGAATTTTCTTCTTTAATCAGAATCAAGGAAACATGAATCATTTTGATAATGACGAAGTTCCAATTCTGCCAATAACACGTGCACAACGATCCGATGAACCTGAGAGTTCTTCATTTCGAAGAAACATATTTAGGACACGAAGTGCCTCAATGTCTATTCCTATGGTTTCTTTGGATCATCCATATGACAGACAACCAAATCTTGTCGGACATACTGGTCCGCTTCGTACGGTGAGGAAAACTCCGTTTAACCAAATGAGCGGTCCACTACATGCTACTTCCGCTACTGGAAATCCTTTTCAGAATAGTTTAGTAGTGGCGCGAAACACTGTAGGAGAGAACAAGACAGATGAAAATCATTGGGAGAATGACTATGACAGAAAAAATGAACACTTGTTGAGGTCCGGACAACTCGGAATGTGTAATGATCCTTATTGCACAACTTGCCCAACTTACGTCAAAGTTTCTGAGCAAAGAAGACCAAGCGGTTCCGCCATATTTGATCCCAAGTTCCACAATTCTCTTTATGGTGATGCCAAAGGTTTTGGAAGAAAATTTCTTTCTTTCTGCTTTTCATGTACTCCTGGAGTGATGAACCCTCACACTAAATTTGTACAACAATGGAACCAGTTTTTGGCCATATTTTGCTTGGTCGCAATTTTTGTTGATCCATTATTTTTCTTCTCAATCTACGTGGACAAGCATATTTTAAGAATCGTTATCGATTGGGGAGTGGCATATATACTTGTTTTACTTAGAAGCATAACTGATGTTGTGTATTTCTTGAACATTCTTCTCCAGTTTAGGTTGGCTTATGTTGCTCCTGAATCAACGGTGGTTGGTGCTGGAGATTTAGTTGACCGTCCCAAGGAAATTGCTATTAATTACTTTAAACGTTATTTTTTCTTCGACTTATTTGTTGTATTACCTCTTCCTCAGATAATAATATTGTTTATCCTACCAAATCACTTGTGGTCTTCAGGAGCAAATTATGCTAAGAATCTTCTACGTCTAGCCATCCTAGTACAATATATTCCTAGATTGTTCAGATTTTTGCCTCTACTAATTGGCCAGTCTCCATCCGGACTCATATTCGAGTCGGCTTGGGCAAATTTCATTTTAAATCTTCTTATTTTTATGCTATCTGGCCATGTTGTTGGTTCGTGTTGGTACCTCTTCGGTCTACAGAGGGTTAACCAATGTTTGCGAGATAAAGGTATCACCAATGCTTGTGTAAATGCAACATCTGGTGTTTTTTCTTATGGAATATATGCCAATGCTGTACCACTTACTATAGAAACTAATGTGATCAACAAGTATGTGTATGCATTGTTTTGGGGATTCCAGCAAATCAGTACTCTGGCTGGCAATCAAGTCCCAAGTTATTTTGTGTGGGAAGTCCTCTTTACAATGTCCATCATTGGATTGGGACTCTTGCTTTTTGCTCTTCTCATTGGAAACATACAAAACTTTCTTCAAGCTCTTGGACGAAGGAGGCTGGAAATGCAACTTAGAGGCCGTGATGTTGAGCAATGGATGAGTCATCGTCGCTTACCAGAAGATCTCAAAAGGAGAGTACGACAGGCTGAAAGATATAGTTGGGCTGCAACAAGAGGTGTTCCTGAGAAAATGGTTTTGGAGAATTTGCCAGAAGATCTTGTGACAGACATACGACGTCATCTCTTCAAGTTTGTTAAAAAAGTTCGTATTTTTTCCCTGATGGATGAGGATGAGCCTATCTTAGATGCCATTTGTGAGCGACTAGTACAAACAACCTACATCAAAGGAAGTAAAATTTTGAGTCAGGGCGGTCTAGTGCAGAAGATGGTGTTTATTGTGCGTGGAAAATTGGAGAGCATTGGAGAAGATCGAATTCCGGTTTCGTTATCTGAAGGAGATGCTTGTGGTGAAGAACTTCTTAGATGGTATCTTGAACAATCTTCCGAAAGCAAAGGTAAAAAAGTAAAGCTTCAAGGAAAGGGGTTGACTAGTGACAGAACAGTAAAATGCTTAACCAATGTGGAGGCTTTTTCTCTTCGCGCAAAAGACATTGAAGAAGTCACAATTCTTTTTGCAAGATTCTTGCGGAGCCCTCGTGTTCAAGGAGTCATAAGGTATGCGTCGCCTTATTGGAGATCTCTTGCAGCAAACAGAATTCAGGTGGCATGGAGATACTGGAAGAAGCGTCGAAGTAGCTCTCATACCAGACAAACTGATTATCAAACATTGAACTCATAG 2271 0.3976 MLLLESVQPNFGIFFFNQNQGNMNHFDNDEVPILPITRAQRSDEPESSSFRRNIFRTRSASMSIPMVSLDHPYDRQPNLVGHTGPLRTVRKTPFNQMSGPLHATSATGNPFQNSLVVARNTVGENKTDENHWENDYDRKNEHLLRSGQLGMCNDPYCTTCPTYVKVSEQRRPSGSAIFDPKFHNSLYGDAKGFGRKFLSFCFSCTPGVMNPHTKFVQQWNQFLAIFCLVAIFVDPLFFFSIYVDKHILRIVIDWGVAYILVLLRSITDVVYFLNILLQFRLAYVAPESTVVGAGDLVDRPKEIAINYFKRYFFFDLFVVLPLPQIIILFILPNHLWSSGANYAKNLLRLAILVQYIPRLFRFLPLLIGQSPSGLIFESAWANFILNLLIFMLSGHVVGSCWYLFGLQRVNQCLRDKGITNACVNATSGVFSYGIYANAVPLTIETNVINKYVYALFWGFQQISTLAGNQVPSYFVWEVLFTMSIIGLGLLLFALLIGNIQNFLQALGRRRLEMQLRGRDVEQWMSHRRLPEDLKRRVRQAERYSWAATRGVPEKMVLENLPEDLVTDIRRHLFKFVKKVRIFSLMDEDEPILDAICERLVQTTYIKGSKILSQGGLVQKMVFIVRGKLESIGEDRIPVSLSEGDACGEELLRWYLEQSSESKGKKVKLQGKGLTSDRTVKCLTNVEAFSLRAKDIEEVTILFARFLRSPRVQGVIRYASPYWRSLAANRIQVAWRYWKKRRSSSHTRQTDYQTLNS 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05868 756 SUPERFAMILY Voltage-gated potassium channels 211 509 - -
Vivi2g05868 756 Gene3D Helix hairpin bin 508 573 - -
Vivi2g05868 756 ProSiteProfiles cAMP/cGMP binding motif profile. 583 651 IPR000595 -
Vivi2g05868 756 SUPERFAMILY cAMP-binding domain-like 509 699 IPR018490 -
Vivi2g05868 756 Gene3D Jelly Rolls 579 704 IPR014710 -
Vivi2g05868 756 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 152 746 - -
Vivi2g05868 756 Gene3D - 222 506 - -
Vivi2g05868 756 CDD CAP_ED 581 698 IPR000595 -
Vivi2g05868 756 Pfam Ion transport protein 219 509 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05868 Vivi-Chr2 188724339 188731301 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05868 24 663 Ion Channels AT3G17700 58.027 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05868 K05391 - gsj:114390051 1047.34