Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05826 ATGAAAACCCAACGCCCTCACCAACTCTTCCTATTATCAATCATCATCTTCGCATCTACATTCTCATATCTACAATCAGTAACCGCCACCGGAGAACAATCTCCAACCACCGGAACCACCGGCGACATCGAATTCATCCGTTCAAGCTGCAACACAACACTCTACCCTGACATATGCTACACTTCCCTCTCTCGTTACGCCAATGCAGTCCAACAGAATCCCGGCCAACTCGCTCGCATCGCCATCGCCGTAAGCTTCTCCAAAGTCCACCGCACCGCTTCTTACCTCTCCAACCTCACTCGCGTCGCCGATTATGGTGGAAACTCCCGCGCCGCTCTCGCTCTCCATGACTGCTTCTCTAACCTCAACGACGCGGTGGATGAAATCCGCGGCTCGATTAAACAGATGCGCCAGATAGGATCCGCCGGTGCCGGAGCCAGCACCAGCGCCGATTCGTTTCTTTTTCAGATGAGTAACGTCCAGACGTGGATGAGCGCGGCGCTTACCGATGAAGAAACGTGTACCGATGGATTTCAAGATGTGGAGAATTGTCCGATGAAAACGGACGTTAACAATCGTGTGACGAAGGTGAAGAAGTTCACCAGCAATGCTTTGGCGTTGGTTAACGGTTACGCCAGTAAAGGAATGCCGTGA 654 0.5214 MKTQRPHQLFLLSIIIFASTFSYLQSVTATGEQSPTTGTTGDIEFIRSSCNTTLYPDICYTSLSRYANAVQQNPGQLARIAIAVSFSKVHRTASYLSNLTRVADYGGNSRAALALHDCFSNLNDAVDEIRGSIKQMRQIGSAGAGASTSADSFLFQMSNVQTWMSAALTDEETCTDGFQDVENCPMKTDVNNRVTKVKKFTSNALALVNGYASKGMP 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05826 217 CDD PMEI-like_3 48 213 - -
Vivi2g05826 217 NCBIfam pectinesterase inhibitor domain 12 211 IPR006501 GO:0004857
Vivi2g05826 217 SMART PMEI_2 41 207 IPR006501 GO:0004857
Vivi2g05826 217 FunFam Pectin methylesterase inhibitor 1 41 211 - -
Vivi2g05826 217 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 207 - -
Vivi2g05826 217 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 44 209 IPR035513 -
Vivi2g05826 217 Gene3D Invertase/pectin methylesterase inhibitor family protein 42 211 IPR035513 -
Vivi2g05826 217 Pfam Plant invertase/pectin methylesterase inhibitor 45 207 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05826 Vivi-Chr2 188034115 188034990 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05826 2 210 Carbohydrate Esterase AT5G53370 24.766 1.02e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05826 - - cam:101503417 331.257