Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05812 ATGGCTTCAACCTCATCTTCTTTCAATCAAGGTCATGTTTACCATGTTTTCTTAAGCTTTAGAGGCGAAGATACACGCGAGACTTTTACCGGTCATCTTTACAATGCTCTTGATCAAAGGGGAATCAACACTTTCATAGATGATGAAGGTTTAAGGATTGGAGAAGAGATTTCACAATCTCTTCTTAATGCAATTGAAGAGTCAAGGATTTCAATCATCATATTTTCTAAGAACTATGCTAATTCAACTTGGTGTCTTGATGAACTTGTCAAGATTCTTGACTGTAACAAACAGAAAGGACAAGTTGTTTGTTCAGTTTTTTATAATATTAGTCCATCAGATGTTAGGCATCAGAGAGGAAGTTATGAAGAAGCTTTTGATATGCTTGAACAAAGATTTCAAGATAACAAGGAAAAGGTGAAGAAATGGAGGTTGGCTTTGACTCAAGCTGCAAACCTCTCTGGATGGCATTTTAGTAATGGGTATGAATTTAAATTTATTCAAAGCATAGTTGATGAGGTGTCAAGAAAGTTGAATCGAATCCCTCTAAACGTCGCCACACACCCAGTTGGACTCCAGGCTCGTGTATCAGAAGTTAAATCTCTATTAGAACTTGAATGCAATGATGTTAAAATGATTGGAATTTATGGTATTGGTGGAATTGGTAAAACAACCATTGCTAAAGCTGTGTACAACACAATATATAATCAATTTCGATATGCGAGTTTTCTAGCAAATGTAAGAGAAAATGCAAATCATAAGGTTGGTTTAGTTAAACTCCAAGAGAGACTTCTTTTTGAGATACTTGGAGAGCAAGGAATGAAATTAGGCAATGTTGATAAAGGAATCAATGTAATCAAAGATAGGTTATGCAGAAGAAAAGTTTTGCTTGTTATTGATAATGTGGATGATGTGGAGCAGTTACAAGCATTAGTCGGTGGATTTGATTGGTTTGGTCCAGGAAGTCGGATTATCATAACTACAAGAGACAAACATTTGTTAACTGCTCATGAAGTTGGTTTAACTTATGAGGTGAAGAAGTTAAATCATATTGAATCTCTTCAACTATTTAGTTGGAATGCATTTAAAAGAAGTGAACCTAAAGATACTTACTTGGATATTTCGAATCGCGCCGTTTCTTACGCAGGTCTTCCATTGGCTTTAACTATTTTAGGTTCTGATTTGTGTGGTAGAAGTATTCATCAGTGGGAATCTGCATTGGATAAGTACAAAAGAACCCCTAATAGGAAAGTTCAAGATATACTCAGAATAAGTTTTGATGGTTTAGAGGAAAATGAAAAGGAGATTTTTCTCTATGTAGCATGTTTCTTTAAAGGAGAGATAATGGAATATGCTTCGAAAGCGCTGCGCGCATGCGATCTGCATCCAGTTATCGGTATTGCAGTGCTTGTTGATAAGTGTCTTATAAACTTGGATGAAAGAGGTGTATTGTCAATGCATGATCTTATACAAGATATGGGGAAGGAAATTGTTAGGCAAGAATCACCAACGGATCCTGGAAAACGCAGTAGGTTGTGGTATTATGAGGACGTGCTTCAAGTACTATCGGATGGAACGGGAACTGACAAGATTCGAGGTATAATGCTAAGTCTACCTGAAAAGCAAGAGGTGCATCTAAAAGCTCAAGACCTAAAGAAGTTAAGAAACCTTAGAATGTTGATAATTCGGAATGCTGAATTTTTCGGAGGCAACATAAATCTACCAAACAGTTTAAGGATGCTTGATTGGGAGGAATACCCTTCTCCATACTTTCCATCGGATTTCCTCCCTGAGAAAATTGTAATGCTAGAGTTGCGGCGAAGTCATATAACATTGAACAAGCCATTCAAGAACTATGCAAATATGACTTCTCTTAATCTTAGTTCATGTGAATTCCTGATAAAAATACCTGATGTATCGGGGATACCGAACTTAGAGCAAATTATTCTAGAGGATTGTAAGAGCTTAGTAGAGATTCATGAATCTATTGGATCACTTGATAAACTAGTTTATTTAGGTGTTGAAAGGTGCACTGAGATAAAAAAGTTACCAAGTATCCTAAACTTGCCATCTTTATCATGCATTGCTCTTAATGGATGTTCTCAACTTGAGAACTTCCCAGAGTTATTGGGAAAAATGGAAAGCCTGAGAATCATCGAGGCAGACGAGACGGCTATACAAGAATTGCCTTCTAATATGGTCAATTTCAGCAACCTTCAAGTGTTAGTACTAAAGTCTTGCAAAAATCTTAAGGATCCTAATGGAACCATTTCCTTGTTGCCAAATCTTGAATTACTTGATATTTCAGGCTGTCCAAAACTTCAACTATTTCAAAAGTCCAATGAAAGGTCATCAAGTTTAGAGTTATCACCAAAAGCATGTCAAGATTTTGACTCTTCAGGCATCCAATCCTCACATGGTTTCCCGTTGTTGGAAACACTCGAACTCAGTAACTGCAGTCTATCAGATGAATATCTACATATCCTTAGTTGCTTTTCAAACCTCACATCCTTAGACATATCAAGAAACCATTTTGTAACCATACCTAAATGCTTCAACAGACTCAGTACCTTGCAGGAGCTTTACATGGCCAATTGCAAGAATCTTCAACAAATTCTTGGAATTCCATCTAATTTAGAGGATATAGATGCCACTAGTTGCACAATGTTGAATTCACAATCATTGAAAATGTTATTAAACCAGGGAATCAATAAGGCATTCAAATTTGAAGTTATAGCACCAAGGCCTAAACTACCAATGCCATTCAAGTTCAACTACCTTAGCAATGAAGGATCCTTGTCATTCTGGATTGGTCAGAAGTTTCCAAGGATCACTCTATGCTTCATATTTGAACTAGGAAATAATAGAATTGGATTTTTCGCTTGTGAAGTGGAGATATCTATTAATGGACAGAAAGCATCTAGTAGAGAACAGTACTTCTTTTCAGTCTCTGGTGATCTTGTATGGCTGTATCATCAAGAAAATTTGATAGATTTAGATACATATTTACTGCATGAACAGAATTATGTGGAAATTTCTTGTGAAATTTTTGACGCGAGTAAAGGCGCAAATGTGACAATATGCTTTTCTGGAGTTCATGAGTATACGGAAGACGAGGAAGATAAGAAACCAAATCTGATATTAAGCACAAGTACTAGGCCTTGTAATAATGAAAACTTGGATGACACACAATTTTCAAGGGAAAAACATGAATATCAATGTCAAGATGAAAATAAGTTGGAAATTGACTGTTGCACTTTGCCTCAGAATTTAAGGCTTCACGAAATATCAAATGAACAGACACAACAACTTTCTGCTTCAATAAGCTCAGAAATGCTTGAAGCTAAGGAGATATGTTCTATGGCTCGGAAGAATGGAAAAACTACAGATATTTTTTCAGATGATACAATACATCAAAGCAAGGAGATATGTTCATTGAATATACAGCTATATGATGATAGAATTTGGGATCCAATGCTATTAGAATGTCAGTTAAACTGTATGAATGAGAAGAATAAAGAAAAAATCGAACCGGAGCCAATAAATCATGAAAATAATAGCAATGATATTTCTGTGATTCCTAAGGAGAATGACAAGTGTGAATTTGGCGAAACCGCCAGTGAAGACGGTATGGAATCATTTTATTCTGCCCTCCATGCTGAGACATTTTCTCCATTAGAAGATACTAAAGATGATTCAAAACTGGCTTATCCTAAAATGAGTGAAGAAATCAAGAAAGCCTTGGAAATTCTGAAAGAACTACTTTCAAAACAAATTTCTCATTTTCTAGAACCAACATCATCAACATCTATGAAATCGAGTTTGGAATATCTTTGTACTTTAATTGCAGATGATGATGTCTCAATGAGGTTAAAGTCTGTTATATTACAACTTTTAGCTGACTTTACTCAGTGGAGCTGTGACTACAATGATGCAAACATGAAACTTGAGTCCTCAACTTTAGTATTATCAAAGCTACAAAAACTTGAAGAGGGTGTTGTGGCCAACAAGGATCAGTTCAGTGAGTTTGTGTCCATAGAAAGTGAGTTAACAAGTCAACTAGTTTATTTGGAAGAAAGAATGAAAGAGCTACAAGAGCAAATTAGTGTCATTAAAGAGAACCTTTCAATCTCTGAAGTGGCTAGGGACGCTGCTGTTAGAAAGAAAAGAGAAACTTTTGACGAAGGAAGAGAGTTGAAAGCTCAAAGAGATGAGTTGAGAAAGCGAAGGCTGCGGTTGAGAGTAGAACAAGAATCAGCCAAAGCTACCAAAGGATACATTGAGGATGAGTGGTCGAAGATTGGAGAGAAATTTGATAGAATCTTCAAAATATTTGGGTTAGCTTATTGA 4350 0.3607 MASTSSSFNQGHVYHVFLSFRGEDTRETFTGHLYNALDQRGINTFIDDEGLRIGEEISQSLLNAIEESRISIIIFSKNYANSTWCLDELVKILDCNKQKGQVVCSVFYNISPSDVRHQRGSYEEAFDMLEQRFQDNKEKVKKWRLALTQAANLSGWHFSNGYEFKFIQSIVDEVSRKLNRIPLNVATHPVGLQARVSEVKSLLELECNDVKMIGIYGIGGIGKTTIAKAVYNTIYNQFRYASFLANVRENANHKVGLVKLQERLLFEILGEQGMKLGNVDKGINVIKDRLCRRKVLLVIDNVDDVEQLQALVGGFDWFGPGSRIIITTRDKHLLTAHEVGLTYEVKKLNHIESLQLFSWNAFKRSEPKDTYLDISNRAVSYAGLPLALTILGSDLCGRSIHQWESALDKYKRTPNRKVQDILRISFDGLEENEKEIFLYVACFFKGEIMEYASKALRACDLHPVIGIAVLVDKCLINLDERGVLSMHDLIQDMGKEIVRQESPTDPGKRSRLWYYEDVLQVLSDGTGTDKIRGIMLSLPEKQEVHLKAQDLKKLRNLRMLIIRNAEFFGGNINLPNSLRMLDWEEYPSPYFPSDFLPEKIVMLELRRSHITLNKPFKNYANMTSLNLSSCEFLIKIPDVSGIPNLEQIILEDCKSLVEIHESIGSLDKLVYLGVERCTEIKKLPSILNLPSLSCIALNGCSQLENFPELLGKMESLRIIEADETAIQELPSNMVNFSNLQVLVLKSCKNLKDPNGTISLLPNLELLDISGCPKLQLFQKSNERSSSLELSPKACQDFDSSGIQSSHGFPLLETLELSNCSLSDEYLHILSCFSNLTSLDISRNHFVTIPKCFNRLSTLQELYMANCKNLQQILGIPSNLEDIDATSCTMLNSQSLKMLLNQGINKAFKFEVIAPRPKLPMPFKFNYLSNEGSLSFWIGQKFPRITLCFIFELGNNRIGFFACEVEISINGQKASSREQYFFSVSGDLVWLYHQENLIDLDTYLLHEQNYVEISCEIFDASKGANVTICFSGVHEYTEDEEDKKPNLILSTSTRPCNNENLDDTQFSREKHEYQCQDENKLEIDCCTLPQNLRLHEISNEQTQQLSASISSEMLEAKEICSMARKNGKTTDIFSDDTIHQSKEICSLNIQLYDDRIWDPMLLECQLNCMNEKNKEKIEPEPINHENNSNDISVIPKENDKCEFGETASEDGMESFYSALHAETFSPLEDTKDDSKLAYPKMSEEIKKALEILKELLSKQISHFLEPTSSTSMKSSLEYLCTLIADDDVSMRLKSVILQLLADFTQWSCDYNDANMKLESSTLVLSKLQKLEEGVVANKDQFSEFVSIESELTSQLVYLEERMKELQEQISVIKENLSISEVARDAAVRKKRETFDEGRELKAQRDELRKRRLRLRVEQESAKATKGYIEDEWSKIGEKFDRIFKIFGLAY 1449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05812 1449 Gene3D Ribonuclease Inhibitor 535 714 IPR032675 -
Vivi2g05812 1449 Coils Coil 1347 1381 - -
Vivi2g05812 1449 Gene3D - 182 341 IPR027417 -
Vivi2g05812 1449 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 156 IPR035897 -
Vivi2g05812 1449 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 709 IPR044974 GO:0006952
Vivi2g05812 1449 Pfam NB-ARC domain 196 415 IPR002182 GO:0043531
Vivi2g05812 1449 Gene3D - 8 181 IPR035897 -
Vivi2g05812 1449 Gene3D - 347 430 IPR042197 -
Vivi2g05812 1449 Gene3D Ribonuclease Inhibitor 719 975 IPR032675 -
Vivi2g05812 1449 SUPERFAMILY L domain-like 486 900 - -
Vivi2g05812 1449 FunFam Disease resistance protein (TIR-NBS-LRR class) 10 180 - -
Vivi2g05812 1449 Coils Coil 1389 1416 - -
Vivi2g05812 1449 Pfam TIR domain 14 182 IPR000157 GO:0007165
Vivi2g05812 1449 PRINTS Disease resistance protein signature 381 395 - -
Vivi2g05812 1449 PRINTS Disease resistance protein signature 289 303 - -
Vivi2g05812 1449 PRINTS Disease resistance protein signature 758 774 - -
Vivi2g05812 1449 PRINTS Disease resistance protein signature 212 227 - -
Vivi2g05812 1449 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 439 IPR027417 -
Vivi2g05812 1449 SMART till_3 13 153 IPR000157 GO:0007165
Vivi2g05812 1449 ProSiteProfiles TIR domain profile. 12 178 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05812 Vivi-Chr2 187891027 187896348 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05812 598 791 WRKY Transcription Factor Family AT4G12020 30.392 1.34e-10 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05812 - - tpra:123904012 1975.29