Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05811 ATGAAAAATTCTTCCTCTACTTCTTTCAACCACGGTTGGACATATGATGTGTTTGTTAGTTTCTACGGCGATGACACTCGTTACGGTTTCACAGGCAACCTTTACAATACCTTGCGCCGAAAGGGAATCAATACTTTCAAAGATGACATCAAACTAAAGAAAGGAGAAGAGATTTCAGCAGATCTTCTCCAAGCAATTGATGAGTCTAGGATAGCCATAATTGTTTTCTCAGAAAATTATGCATCCTCAACTTGGTGCCTTGACGAACTTGTGAAGATCATGGAGTGTAAGAAAGACAAAGGACAATTAGTCCGTCTAGTTTTCTACCATGTTGACCCTTCAAATGTAAGGCATCAGAGGGAAAGTTTTGGAAGGTCAATGGCTAAGCATGAAGAAAATCTCAAAATTAGTGAAGAAAAAGTATGTAAATGGAGAAGTGCACTCTCATCAGCTGCAAATTTATCAGGATGGCATTTCAAAAATGGGTATGAGTATGAATTGATTCAAAAGATCACCGAAGAAGTATCGAATCAATTAAATCTAATTCCCTTACACATAGCTGATAATCCAGTTGGATTGAATTACAAAATTTCTCAAGTGTTATCACTTCTAAAAATCAAGTCTAATGATGATGATGTTTGCATGGTTGGAATTTGTGGAATTGGTGGCATTGGTAAAACAACACTAGCTAGAGCAGTATATAACTCAATTTCTAGAAAATTTGATAGTTCAAGTTTTCTTGTTGATGTAAGAGAAAATTCAATGAAACATGGTCTAGTACACTTGCAAGAGACCCTTTTGCTTCATTTGCTAGACGAAAATATCAAACTGGATGATGTGAGCAAAGGAATTCCAATATTAAAAAGACGGCTTCGTAACAAGAAGGTTCTTTTGATTCTCGACGATGTCGATAATCTTCAACAGTTAAGATCATTGGTTGGAAGAAATGATTGGTTTGGTTTTGGAAGTAGGATTATCATAACAACCAGAGATAAACATCTGTTAACTACCCATGGAGTTGAAAAAGAAAAACTATATGAAGTGAAAGAACTGAATGATCGGGAATCTCTTGAGCTTTTTAGTATGAGGGCTTTTAGAAAAAGTGTGCCTAATCCAAGTTATGTGGAGATAGCAAAAAGTGTAGTGCAATATGCAAAAGGTCATCCATTGGCTTTGAATGTGATAGGATCTGATTTATTCGGAAAAACAGTAGAAGAATGGAAGAGTGCGTTGAATAAATATGAAACAATCCCAAGCAAAGAGATTCTGAATGTCCTTAAAGTAAGCTATGACAATTTGGATGATAACGAAAAGGAAATTTTCCTTGACATTGCTTGTTTCTTCAAAGGATATCCGAAGGCGGATGTAGAAAATACACTAGATGCGAGTCGGTTTTATTCGAAATATGGCATTGGAGTACTTGTTGACAAATCACTTGTCACAATTGGTGAGTCCAATTCAGTGAAGATGCATGATCTTGTACAAGACCTTGGTAAAAACATTGCTAGAAACGAGTCGCCGTTTGATCCAAGCAAACGCCGAAGATTATGGCATCACGAGGATGTTTTTGAAGTCTTGACAGAAAGCATGGGAAGTGATACAATTGAAGGCATTGTGTTGGACATGCCTAACCTAAAACAAGAAATTCGGTTAAAAGCCAATACCTTCGATAATATGCGAAGGCTTAGAATCCTCATAGTTAGGAACGGACAAGTTTCTGGAGCACCTCAAAATCTTCCAAATAACTTGAGATTGCTTGAGTGGAACAAATATCCTTTAACATCTTTACCTGATAATTTTCATCCAAAGACACTTGTTGTACTCAATTTACCAAAGAGTCATATAAAAATGGATGAGCCATTCAAGAAGTTTGAGCACTTGACTTTTATGAACTTCAGTGATTGTGACTCTCTAACAAAACTACCGGATGTATCTGCAACCCCAAATCTAACAAGAATTCTTGTTAATAATTGTCGAAACTTGGTTGACATTCATGAATCTGTTGGAGATCTTGACAAACTAGTCACATTAAGCACCGAAGAATGCCCTAAACTCAAGAGTTTTCCGCGAGGCCTGAGATCAAAATATCTGGAATACCTTAATCTTAGAAAGTGTTCAAACATTCAAAGTTTCCCAGATGTATTGGCAGAAGTGGAAAATATGAAAAATATTGACATCGGAGGGACGGGCATAAAAAAGTTTCCAAGTTCAATTGAAAACTTCAAAGGCCTTGAAGAATTAGTATTGACATCATGCGCAAATGTTGAAGATCTACCTAGCAACACAGATATGTTTCAAAGTATTGAAGAGCTGAATGTGGAAGGATGTCCTCAACTTCCAAAACTCCTATGGAAGTCATTGGAAAACAGGACTAATGATTGGCATCCAAAGTTAAGCAATCTGAGTCTAAAGAATTGTAATGTATCAGATGAAGATCTTGAGTTAATTCTCAAATGTTTTCTACAATTAAAGTGGTTGATCCTATCAGATAACAACTTCTTGACCATTCCTGATTGCATTGAAGACCTTTCTCATCTCTTGCTTCTTAACTTAGAAAACTGCAAGCATCTTAGAGATATTTCAGTGCTTCCACCATATTTGCAATATATAGATGCAAGGAAGTGTATGGCATTGACTCCTCAATCATCAGACGTATTATTGAGCCAGGCATTTCAGGAAGTTGAGTACATAGACATAGTTGTTCCAAGGAAAAAAATTCCAAATTGGTTTGATCATTGTAATAAAGGAGAGTCTACCGCCTTTTGGATTCGTAAAAGCTTCCCTACAATCGCTCTGTTTTTTCTTTTAAGTGGTGATGATGATGAAAGGAAAACAAATTATACATGTGAATTCTGCATACTAATAAATGGCATACAAGTATTCCAAGGAAGAAGCGAGTGGCCAGTTGATCATATATGGCTTTTTGATCTGCGAATTCACCTCACCGCGAGCGAGTGGCAAGGCTTCAATGAACAAATAAAATCTAGTTGGAATCATGTGGAGATTTCATGTTCAGTCATTAATGAGTCAAAAAATTTAACTATAAAATGCTGTGGAATTCATCTATACAAAGATAGAATGAATATTCACCATGTCTCCTTCATAAGTCCCGATCTTCAAAGCTCAAATATGGTCCGTGATAATGATAGTTTGGATATCTATGATGAAGTAAGCGATGATGTTGTTTTTACTTCAATATTTGCTAAATATTTTAAAAAGACTATATTAGAGACCATGAGTGATCTTCAATCCAGCAAGAGGAACATGGAAGAGGAGTTGGAACTAGACAGTGACACTGACATTGACTGCCAGTACATGGAAGAGGAACACGATTCATCTTCCCTTAATCATCAAATCCTAGAAATGTTTGAACCTGTGTTTGCAGACAATGAAAAAGATGCCAATTCGAGTAAAATCTTGCTTGATCCTTCTATTGAAACACAAGAAGAACCCCTTGTTACAAGTATCCATAACAAGGATCCAACACTTGCACAAAAAGAAAAGTTGAAGGAGATTGAAATTTTTGCACCGGAATCAACTCAAGAATCAAGTACCATTGCATCAACAAGCACAGACAAGGGAACACAGTTAGTTGATAAAATAACTTTTGTTGAACAAATCAAAGTTAATTCAACAAAAAGAAAACAACTTATCTTAAATGCAGAATCCTACATAAAAATTGTTGAGTCCACCATAAATGAAAATAATATGGAAGAATTTTATGCTTCACTTGAAGCAGAAAAAGCTTCTCCCATAGAAGTTCAATCCAACAATGAAATTGTGGGAACTAGGCCTAGTGAAGAAACTCAGAAAGCATTGCAGATTCTACAAGACCTTGTCTCGAAAAAGTTCTCTCATTTGCTACATCCAGGACGTTCCGGATTGATGAAAGATATTCTCAAGTACCTACTCAGTTTAACACCAGATGAAGGATTTTCCCTGAAATCAAAATCAATAACACTGCAACTTTCACACGGCTTTTCTCAGTGGAGCTTGGATTACAACAATGCAAACATTAAACTTGAGTCAGCGACTACAGATCTAACTAAAGCTGAGAAAATGAAGGATTATCTTGAAGATAATGTGAAAGATTTCCGAGAAATGGACATGGTGGAGAAGTGTTTATCGAATCAGTTGGCATGCTTGCAGGAAGAGAAGAGAGAACTTGAAGAGAAAATGAATGCCATAAAAGCTGAGATTGCAGATTTTACAGCACAGAGAGACATGGTTGCCAAGAGAAAGACAGAATTGTTTCAGACAGGAAGTGTGATGAAAGCTGAAAGGGATGATTTGAGGAACCAAGTGCCAAGGTTGAAAGCTGAGAAGGAATTGGCAAATATAACACAAGCAAATATTGAAGAAGAATGGTCAAAGCTTGGAGAACAATTCATTGGAAGCATCAATTTTGAAGAGTTGACCTTAGAAACTTCACCTAAATAA 4440 0.3637 MKNSSSTSFNHGWTYDVFVSFYGDDTRYGFTGNLYNTLRRKGINTFKDDIKLKKGEEISADLLQAIDESRIAIIVFSENYASSTWCLDELVKIMECKKDKGQLVRLVFYHVDPSNVRHQRESFGRSMAKHEENLKISEEKVCKWRSALSSAANLSGWHFKNGYEYELIQKITEEVSNQLNLIPLHIADNPVGLNYKISQVLSLLKIKSNDDDVCMVGICGIGGIGKTTLARAVYNSISRKFDSSSFLVDVRENSMKHGLVHLQETLLLHLLDENIKLDDVSKGIPILKRRLRNKKVLLILDDVDNLQQLRSLVGRNDWFGFGSRIIITTRDKHLLTTHGVEKEKLYEVKELNDRESLELFSMRAFRKSVPNPSYVEIAKSVVQYAKGHPLALNVIGSDLFGKTVEEWKSALNKYETIPSKEILNVLKVSYDNLDDNEKEIFLDIACFFKGYPKADVENTLDASRFYSKYGIGVLVDKSLVTIGESNSVKMHDLVQDLGKNIARNESPFDPSKRRRLWHHEDVFEVLTESMGSDTIEGIVLDMPNLKQEIRLKANTFDNMRRLRILIVRNGQVSGAPQNLPNNLRLLEWNKYPLTSLPDNFHPKTLVVLNLPKSHIKMDEPFKKFEHLTFMNFSDCDSLTKLPDVSATPNLTRILVNNCRNLVDIHESVGDLDKLVTLSTEECPKLKSFPRGLRSKYLEYLNLRKCSNIQSFPDVLAEVENMKNIDIGGTGIKKFPSSIENFKGLEELVLTSCANVEDLPSNTDMFQSIEELNVEGCPQLPKLLWKSLENRTNDWHPKLSNLSLKNCNVSDEDLELILKCFLQLKWLILSDNNFLTIPDCIEDLSHLLLLNLENCKHLRDISVLPPYLQYIDARKCMALTPQSSDVLLSQAFQEVEYIDIVVPRKKIPNWFDHCNKGESTAFWIRKSFPTIALFFLLSGDDDERKTNYTCEFCILINGIQVFQGRSEWPVDHIWLFDLRIHLTASEWQGFNEQIKSSWNHVEISCSVINESKNLTIKCCGIHLYKDRMNIHHVSFISPDLQSSNMVRDNDSLDIYDEVSDDVVFTSIFAKYFKKTILETMSDLQSSKRNMEEELELDSDTDIDCQYMEEEHDSSSLNHQILEMFEPVFADNEKDANSSKILLDPSIETQEEPLVTSIHNKDPTLAQKEKLKEIEIFAPESTQESSTIASTSTDKGTQLVDKITFVEQIKVNSTKRKQLILNAESYIKIVESTINENNMEEFYASLEAEKASPIEVQSNNEIVGTRPSEETQKALQILQDLVSKKFSHLLHPGRSGLMKDILKYLLSLTPDEGFSLKSKSITLQLSHGFSQWSLDYNNANIKLESATTDLTKAEKMKDYLEDNVKDFREMDMVEKCLSNQLACLQEEKRELEEKMNAIKAEIADFTAQRDMVAKRKTELFQTGSVMKAERDDLRNQVPRLKAEKELANITQANIEEEWSKLGEQFIGSINFEELTLETSPK 1479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05811 1479 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 157 IPR035897 -
Vivi2g05811 1479 Coils Coil 1428 1448 - -
Vivi2g05811 1479 SUPERFAMILY L domain-like 556 882 - -
Vivi2g05811 1479 Gene3D - 350 434 IPR042197 -
Vivi2g05811 1479 Gene3D Ribonuclease Inhibitor 695 915 IPR032675 -
Vivi2g05811 1479 Gene3D Ribonuclease Inhibitor 538 694 IPR032675 -
Vivi2g05811 1479 Gene3D - 11 177 IPR035897 -
Vivi2g05811 1479 Pfam NB-ARC domain 197 429 IPR002182 GO:0043531
Vivi2g05811 1479 Pfam TIR domain 15 182 IPR000157 GO:0007165
Vivi2g05811 1479 Coils Coil 1372 1406 - -
Vivi2g05811 1479 SMART till_3 14 154 IPR000157 GO:0007165
Vivi2g05811 1479 ProSiteProfiles TIR domain profile. 13 179 IPR000157 GO:0007165
Vivi2g05811 1479 Gene3D - 178 343 IPR027417 -
Vivi2g05811 1479 FunFam Disease resistance protein (TIR-NBS-LRR class) 11 181 - -
Vivi2g05811 1479 Coils Coil 1072 1092 - -
Vivi2g05811 1479 SUPERFAMILY "Winged helix" DNA-binding domain 420 526 IPR036390 -
Vivi2g05811 1479 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 444 IPR027417 -
Vivi2g05811 1479 PRINTS Disease resistance protein signature 290 304 - -
Vivi2g05811 1479 PRINTS Disease resistance protein signature 385 399 - -
Vivi2g05811 1479 PRINTS Disease resistance protein signature 215 230 - -
Vivi2g05811 1479 PRINTS Disease resistance protein signature 841 857 - -
Vivi2g05811 1479 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 796 IPR044974 GO:0006952
Vivi2g05811 1479 Coils Coil 1334 1368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05811 Vivi-Chr2 187881541 187887858 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05811 1 782 WRKY Transcription Factor Family AT4G12020 31.756 8.19e-95 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05811 - - pcin:129293148 1661.35