Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05806 ATGGCTATGGCTTCCGTCAACGAGGAATTTACCTACGACGTATTCCTTAGTTTCAGAGGCGACGATACTCGTTATGGTTTCACCGGCCATCTCCGCAAAGCTCTTGATGACAAAGGTGTTCGAACCTTCATGGATGACGAAAAGCTTCAAAAAGGGGATGAAATCACACCATCACTTCTCAAAGCAATTGAACACTCCAAAATCGCCATCGTTGTCCTCTCTAAGAACTACGCTTCTTCATCCTTTTGCTTACAAGAACTCTCTAAGATCCTTGATTCAGTGAACGGTAAGGATCGTTCTATTTTGCCGGTTTTTTATAAGGTGGATCCCTCTGATGTACGAAAGTTGAAAAGAACTTATGGAGAAGCCATGGATAAACATGACGAAGCCAGCTCATCCAGTCATAACACGAATGACAAATGGAAGACGTCTCTGCATCAAGTTGCTAATTTGTCTGGATTTCATTACAAGAAAGGGGATGGGTATGAGCATGAGTTTATTGGAAAGATTGTTGAACAAGTCTTACAAAAGATAAAACCGGTTACTTTACCTGTTGATGATTACCTAGTTGGACTGGAGCCTCAAATACAACATCTAATGTCACTTTTGAATGTTGGGCATGATAAGAAAGTCCGCATGGTAGGGATTCATGGAATTGGTGGAATAGGAAAAACAACTCTTGCTCTAGCAGTTTTTAATTCGATTGCCCATCAATTTGAAGGGTCGTGCTTTCTTGAAAATGTTAGAGAAAATTCTGAGAAACATGGGTTGCCATATCTCCAAATGATTTTTCTTTCTAAAGTAGTTGGAGAGAAAATTGAGTTAACCGGTGTTAATGAGCCAGAGCAATTACAGGCTATTGCTGGAAGACACGAGTGGTTTGGTCCTACAACTAGAATCATCATCACCACTCGGGACAAAAGATTGCTGACAGATCATGGAGTTGAAAGCACATATGAGGTGAAGGAGTTGAGCTACTGGGACTCTTATAGATTATTACTTAAACGAAAAAGAAAAATTTCCGAGTCAGACAAAAAACGTTCAGATTATTTGCGTGTTTTAAGACGTGCCTTAAGATATGCTTCTGGGATTCCATTGGTTTTGGAAGTAATATCTTCTCAGTTATTTAATAAAACAATAGAACAATGTAATTTTGTTTTAGATAGTTATGATAGGAGGATTCCTAACAAAAAGATTCAAATCATACTACAAATGAGCTTTGATGCTTTGAATGAAGAAGAAAAGAGTGTTTTTCTTGATATTGCCTGTTGCTTCAAAGGATGTAAATTGGCAAAGGGAACCAGTTCAATTGAAATCATTTATTTGGATAGTTTAAATAAAGTAAAATGGGATGGAGAAGCTTTCAAGAAGATGAAAAATCTCAAAACACTAATTATTAGGCATGCTACTTTTTCTAAAAGTCCCAACTATCTTCCAAATAGTCTAAGAGTACTGGAATGGTGTGAGTATCCTTCATCAAATTTACCATCTGGTTTTTATTCGGAGAAACTTGTTATATGCAATTTTGGCTCTAACTTTACAACAAATCCATTTGAGTGTGAGGACTTTCTCCAGAAGAAGTTCCAGAACATGAAAGTTTTAAATTTTGACCATTTTAAACTTTTAACAAAAACACCTGACCTATCTAGTCTCCCAAATTTAGAAGAACTTTCATTTCAAAATTGTGGGAATCTAATTGCAATTGGTAAATCGATTGGGTTTCTGTACAAACTCAAAATCTTGAGAATTATGCATTGCAATGTAATCCATAGTGTTCCACCTCTCAATTGGGCTTCACTAGTAGAACTCGATATTTCACATTGTGATAGTCTAGAAAGTTTTCCTCGCGTTGTGGATGGATTTGTTGGTGAGCTTCAAATCTTGAGGGTTATAAGTTGCCGCAAAATTAGAACTATTCCACCTCTTATGCTAGCTTCTCTTGAAGAACTAGATCTTTCAAATTGTACCAGCCTTGAGAGTTTTCCACTTGTGGAAGACGGGTTGCTCGTTAATCTTAAGACCTTGAGAGCTATTAATTGCATCCAGCTTAGGAGTATTCCAACTCTCAAGTTGGCCTCTCTGGAAGAAATTGATCTGTCACAATGTTCTTGTCTTGAGAGCTTTCCACCTGTGGTAGATGGGTTAGTGGATAAGCTTAAAACTATGAGTGTTAGAAGATGTGTCAAGCTAAGGAGTATTCCGCCTCTGAAGTTGGATTCGCTAGAAAAACTGGATCTTTCACATTGTTATAGTCTTGAGAGTTTTCCACTTGTGATGGACGGGTTTCTTGGCAAACTTCAAACCCTGCTTGTTAAAAGTTGTGACAGTCTCAGGAGTATTCCTCCTCTCAAGTTAAATTCCTTAAAAGAACTCGACCTTTCTCATTGTTATAATCTCGAGAGCTTTCCAATTGTAGTGGATGGATTGTTGGATAAACTTGAAATCTTGAGTATTGAATATTGCATCATGCTTAGGAGTATCCCACCGTTGAGGTTGACTTCATTGGTAAAATTCAATCTTTCATATTGTCTAAGTTTAGAGTGTTTTCCAGAAATATTAGGAGAGATGAGAAATATACCACAACTTTACTTGGGTAGCACTCCCATAAAAAAATTGCCATTTCCATTTCGAAATTTTACTCCGCCCCCAACATCATATCCATGTAACTGTGGAATTGTTAATTTACCAAATAGAGTTGCTGCAATGTCAATGTTGGCTAAACTTACCATCAAGGCTGAAAAAAAAGTGAGCCCGGTGCAATCTTCACAAGTAGAATATATTTGTCTCACGAAATGCAAACTTTCAGATGAATATTTGTCAATAGGTCTCATGTTGTTTGCTAATGTGAAAGAATTACATTTAACTGACTGCCAAGTCACAGCACTTCCTAAATCTATTGAAAAATGTCACTTTTTATGGAGGCTTGTCTTGGATGATTGTGAGGAACTTCAGGAAATTAAAGGGATTCCACCAGGCTTAAAAGAATTATCTGCATTAAACTGCAAATCGTTGACTTCGTCATGTAAAAGCAAACTATTAAGTCAGGAATGGCATGAGTATGGAAACACTCGGTTCTGTTTGCCACGAGCAAAGATTCCAGAATGGTTCGACTACCAATGCTTGGCAGGATTGTCAACTTCTTTCTGGTTTCGCAATAAGTTTCCTGCCATAGTTCTCTGTGTTGTTTCTCCATTGACATGGGTAGATGATATTCGACATCGTGTAAGAGTGACCATCAATGGAAATACATTTCTATATACACATGGTTTGAAGATACGTACGTCACCGGCCAAAATGTATACTTTAAATCTTTTTCACATGCAAATGAAAAACTTCAATGATAATATGGACAGAGCACTTTTAGAAAATAAGTGGAACCATGCAGAGGTTAACTTTGGATTCCCATTCATGAATAGCGGAATCCATGTATTGAAAGAGAAAAGTAGCATGAAGGATATTCGATTCACCAACCCAGAGAATGATGCTAATATTGAGTTCCCTCAGAATGTTGAAGTATACAATTGA 3525 0.3733 MAMASVNEEFTYDVFLSFRGDDTRYGFTGHLRKALDDKGVRTFMDDEKLQKGDEITPSLLKAIEHSKIAIVVLSKNYASSSFCLQELSKILDSVNGKDRSILPVFYKVDPSDVRKLKRTYGEAMDKHDEASSSSHNTNDKWKTSLHQVANLSGFHYKKGDGYEHEFIGKIVEQVLQKIKPVTLPVDDYLVGLEPQIQHLMSLLNVGHDKKVRMVGIHGIGGIGKTTLALAVFNSIAHQFEGSCFLENVRENSEKHGLPYLQMIFLSKVVGEKIELTGVNEPEQLQAIAGRHEWFGPTTRIIITTRDKRLLTDHGVESTYEVKELSYWDSYRLLLKRKRKISESDKKRSDYLRVLRRALRYASGIPLVLEVISSQLFNKTIEQCNFVLDSYDRRIPNKKIQIILQMSFDALNEEEKSVFLDIACCFKGCKLAKGTSSIEIIYLDSLNKVKWDGEAFKKMKNLKTLIIRHATFSKSPNYLPNSLRVLEWCEYPSSNLPSGFYSEKLVICNFGSNFTTNPFECEDFLQKKFQNMKVLNFDHFKLLTKTPDLSSLPNLEELSFQNCGNLIAIGKSIGFLYKLKILRIMHCNVIHSVPPLNWASLVELDISHCDSLESFPRVVDGFVGELQILRVISCRKIRTIPPLMLASLEELDLSNCTSLESFPLVEDGLLVNLKTLRAINCIQLRSIPTLKLASLEEIDLSQCSCLESFPPVVDGLVDKLKTMSVRRCVKLRSIPPLKLDSLEKLDLSHCYSLESFPLVMDGFLGKLQTLLVKSCDSLRSIPPLKLNSLKELDLSHCYNLESFPIVVDGLLDKLEILSIEYCIMLRSIPPLRLTSLVKFNLSYCLSLECFPEILGEMRNIPQLYLGSTPIKKLPFPFRNFTPPPTSYPCNCGIVNLPNRVAAMSMLAKLTIKAEKKVSPVQSSQVEYICLTKCKLSDEYLSIGLMLFANVKELHLTDCQVTALPKSIEKCHFLWRLVLDDCEELQEIKGIPPGLKELSALNCKSLTSSCKSKLLSQEWHEYGNTRFCLPRAKIPEWFDYQCLAGLSTSFWFRNKFPAIVLCVVSPLTWVDDIRHRVRVTINGNTFLYTHGLKIRTSPAKMYTLNLFHMQMKNFNDNMDRALLENKWNHAEVNFGFPFMNSGIHVLKEKSSMKDIRFTNPENDANIEFPQNVEVYN 1174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05806 1174 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 662 IPR044974 GO:0006952
Vivi2g05806 1174 Gene3D Ribonuclease Inhibitor 877 1018 IPR032675 -
Vivi2g05806 1174 PRINTS Disease resistance protein signature 783 799 - -
Vivi2g05806 1174 PRINTS Disease resistance protein signature 213 228 - -
Vivi2g05806 1174 PRINTS Disease resistance protein signature 361 375 - -
Vivi2g05806 1174 FunFam Disease resistance protein (TIR-NBS-LRR class) 8 180 - -
Vivi2g05806 1174 SUPERFAMILY L domain-like 708 1014 - -
Vivi2g05806 1174 Pfam TIR domain 12 180 IPR000157 GO:0007165
Vivi2g05806 1174 SUPERFAMILY L domain-like 435 756 - -
Vivi2g05806 1174 Gene3D - 182 319 IPR027417 -
Vivi2g05806 1174 ProSiteProfiles TIR domain profile. 10 178 IPR000157 GO:0007165
Vivi2g05806 1174 Gene3D - 6 181 IPR035897 -
Vivi2g05806 1174 Pfam NB-ARC domain 197 245 IPR002182 GO:0043531
Vivi2g05806 1174 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 421 IPR027417 -
Vivi2g05806 1174 SMART till_3 11 151 IPR000157 GO:0007165
Vivi2g05806 1174 Gene3D Ribonuclease Inhibitor 718 859 IPR032675 -
Vivi2g05806 1174 Gene3D Ribonuclease Inhibitor 429 621 IPR032675 -
Vivi2g05806 1174 Gene3D Ribonuclease Inhibitor 622 717 IPR032675 -
Vivi2g05806 1174 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 154 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05806 Vivi-Chr2 187807839 187812104 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05806 785 996 WRKY Transcription Factor Family AT5G45050 30.556 1.39e-06 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05806 - - psat:127130668 1306.2