Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi2g05776 | ATGTTTTATGAAGTTTTATCTAACATCATGAGCCTGGTCATTGACTTAACCATATTATATATGGTTTTGTTCTTTCTGTCATTGAACATCGTTTTCTGTATTGAAATCGAAATCAAGGAGTTTTATCCACAAGAAAGATATGCTTTGTTACTCATAAGAGATTCATTAAATTCTTCTGTGGATTTGCATGGAAATTGGACAGGACCGCCTTGTATAAACAATATTAGTAGATGGTTTGGTATCACTTGTTCAAATTGGCATGTTGTTCATATTATAATTCAAGGTGTTAATCTGCGTGGCTATTTACCTTCAACGGTTCTTCAAAACATAACTTTCTTGAGGCGAATTGATTTCAGAAACAATGCACTTTTCGGACTATTGCCGAATCTCACAGGTTTGGTTTTCTTAGAAGAAGTGAAACATTCTTTTAATCATTTCTCGGGGTCAATTCCTTTGGAATATGTTGAGTTGCTTGGTCTTCAAGTTTTGGAGCTGCAAGAGAATTACTTAGATGGTGAAATTCCACCTTTTGATCAATCATCATTGAGAAGTTTCAATGTTTCATATAATCATTTGGTAGGGAAAATTCCTGAAACTTCTTTGCTTCAAAGGCTTCCAAAAAGTGCTTTTGATGATAATTCTGAACTTTGTGGAAAGCCATTGGATATGTCATGTCCTCCTTCTATGGAAAAAAATAAGAAAAAACTTCAAGTTTGGATTATTGCTTTGATTGCTTTTGGAGCTGGTTTGTTTCTTTTTCTGATGATTATTGCTTTCTTGTTTTGTAAAAGAAAAGCTAGAGGAAATGAAAGAAGAAGAAATGGTTCATCAAGGTATACTTTTGGAGCATGGGCATCTAATGTAGGGAATAGTGAAGATTCTGGAAGATTAGGCCAATTGGAATTTTTCGACAAGAAACTTCAAGCTTTTGACATGGATGATTTATTAAGAGCATCTGCAGAAGTTGTAGGAAGAGGAGAATTTGGTGTTACATATAAAGCAACACTTGAAACTGGCAATGTTGTTGCAGTGAAGAGACTTAGTTACATGAATGAATTGAGCAAGAAGGAATTTGTTCAGCAAATGCAATTGCTAGGACAGATAAAGCATGAAAATTTGGTGGAAATTATCTCCTTTTATCATTCAGAAGATCAAAAGCTTATCATATATGAAGTTGTCTCTGATTGCACTTTGTTTGAACTCCTACATGAGGGAAGAGGAATTGGAAGAATACCACTTGATTGGAGCACAAGGCTTTCAATTATCGAAGACATAGCAAAAGGACTTGATTTCCTTCATCAATTTTTATCTTCACACAAAGTACCTCATGCAAATCTCAAATCATCAAATGTTCTAATCCTTCAAACCAACCAAGGTTACCATTCCAAGCTCACAGACTATGGTTTCTTGTCATTACTCTCATCATCCAACAAAAATGCAGAAAAGCTATCAATAAGCAAGTCACCGGAATTCGTTAAAGGGAAAAAGCTGTCACACAAAACTGATGTATATTGTTTTGGCATCATTATGCTAGAGATTATAACTGGTAAAATTCCTGGAGGTGGCGAAGTTGAAGAAACGACGGGTAATGATCTTTCGGATTGGGTTAGAACTGTGGTGAATAATGATTGGTCTACTGATATATTGGATTTGGAAATATTGGCTGAAAGAGAAGGACATGATGCAATGTTGAGTCTTACTGAGATAGCTTTAGAGTGTACTGATTTGGTGCCTGATAAAAGGCCTAAGATGAGTGTAGTGTTGAAGAGAATTGAAGAGATGGAACAAATGATAAAAGAGAATGATTGA | 1809 | 0.351 | MFYEVLSNIMSLVIDLTILYMVLFFLSLNIVFCIEIEIKEFYPQERYALLLIRDSLNSSVDLHGNWTGPPCINNISRWFGITCSNWHVVHIIIQGVNLRGYLPSTVLQNITFLRRIDFRNNALFGLLPNLTGLVFLEEVKHSFNHFSGSIPLEYVELLGLQVLELQENYLDGEIPPFDQSSLRSFNVSYNHLVGKIPETSLLQRLPKSAFDDNSELCGKPLDMSCPPSMEKNKKKLQVWIIALIAFGAGLFLFLMIIAFLFCKRKARGNERRRNGSSRYTFGAWASNVGNSEDSGRLGQLEFFDKKLQAFDMDDLLRASAEVVGRGEFGVTYKATLETGNVVAVKRLSYMNELSKKEFVQQMQLLGQIKHENLVEIISFYHSEDQKLIIYEVVSDCTLFELLHEGRGIGRIPLDWSTRLSIIEDIAKGLDFLHQFLSSHKVPHANLKSSNVLILQTNQGYHSKLTDYGFLSLLSSSNKNAEKLSISKSPEFVKGKKLSHKTDVYCFGIIMLEIITGKIPGGGEVEETTGNDLSDWVRTVVNNDWSTDILDLEILAEREGHDAMLSLTEIALECTDLVPDKRPKMSVVLKRIEEMEQMIKEND | 602 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi2g05776 | 602 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 | 23 | 596 | IPR046959 | - | |
Vivi2g05776 | 602 | Gene3D | Transferase(Phosphotransferase) domain 1 | 394 | 602 | - | - | |
Vivi2g05776 | 602 | Gene3D | Phosphorylase Kinase; domain 1 | 284 | 391 | - | - | |
Vivi2g05776 | 602 | SUPERFAMILY | Protein kinase-like (PK-like) | 321 | 592 | IPR011009 | - | |
Vivi2g05776 | 602 | Pfam | Protein kinase domain | 321 | 586 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vivi2g05776 | 602 | ProSiteProfiles | Protein kinase domain profile. | 317 | 598 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vivi2g05776 | 602 | ProSitePatterns | Protein kinases ATP-binding region signature. | 323 | 345 | IPR017441 | GO:0005524 | |
Vivi2g05776 | 602 | Gene3D | Ribonuclease Inhibitor | 42 | 227 | IPR032675 | - | |
Vivi2g05776 | 602 | Pfam | Leucine rich repeat N-terminal domain | 44 | 84 | IPR013210 | - | |
Vivi2g05776 | 602 | SUPERFAMILY | L domain-like | 42 | 208 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi2g05776 | Vivi-Chr2 | 187568453 | 187571327 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi2g05776 | 45 | 594 | Receptor kinase-like Gene Family | AT1G48480 | 34.080 | 2.76e-98 | 311 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Vivi2g05776 | Pkinase | 6.4e-33 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi2g05776 | - | - | gmx:102668068 | 830.861 |