Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05748 ATGGATGCTTGTTATGTATTACCTCATACTTATCAAATCCAAATAAAGTCATATAACATACACCTCTTACTATTCCACCAAATGAAGCCTTTTTCTTTGTTGGCATACCTTCATGTTGTTTTTCTGTTTACTGTAAATTTAATTTGGTTTGGTCCAAACAAAATTGTGGCAGTATCATTAGGAAACCAAACAGATTATTTGGCATTGCTCAAATTTAAAGAATCAATATCTAGTTATCCGTATGGAACTCTTGAATCTTGGAATACTTCCATCCACTTCTGCAAGTGGCATGGGATCACATGCAGCCCCATGCACCAAAGAGTTATAGACTTGAACTTAGAAGGATATCAATTACATGGATCTTTATCTCCTCATGTTGGCAATCTCTCTTATCTGATAAATCTCAACCTTAACAACAACAGCTTCTTCGGAGAAATACCACAGGAGTTGGGTCGGTTGCTGCAATTACAACAACTTCATCTTGCTGATAACTCGTTTACAGGTGAAATTCCTACAAACTTGACATATTGTTCCAATCTCAAAGGCTTGTTTTTGGCAGGGAACAGTTTGATTGGCAAAATACCAATTGAAATTGGCTCTTTGAGAAAGCTTCAATCGTTCAACTTTTGGAAAAATAATTTAACCGGAGGAATCCCTTCATTCATTGGGAATCTTTCATTCTTAACTGTTTTGGTATTTGACTATAACAACTTAGAGGGAGATATTCCCCAAGAAATATGTGCCCTCAAAAACTTGACAATTTTAACTGGCGCTGTGAATAATTTGTCTGGTATGATTCCTTCTTGTCTTTACAATATGTCATCACTTACTGCGCTCGTCACAGAAAAGAATAAGATTTATGGTTCTCTTCCACCCAACTTGTTCCACACCCTCCCCAAGCTCGAACATTTTTTAATTGGAGGGAATCAATTCTCTGGCCCAATTCCAACTTCAATTATAAATGCATCTTCCTTTGTAGAATTTGATATCAGTCAAAATCAATTTGTCGGACAAGTTCCAAATCTAGAAAGGCTAAAAGATCTGCAATATTTGAATTTGGAATACAATCATTTAGGTGGCAATTCAACTAATGATTTGGAATTTTTACATTCTTTGGCAAACTGTACTAAGTTGTATATGTTTTCTATGTTCCATAATAATTTTCAAGGTGTTCTCCCAAAGGCCATAGGAAATTTATCCATTGAACTCAATGAACTATATCTTGGGTTTAATAATATATCAGGAAAAATTCCTGCAGAATTAGGATATCTTACTGGCTTAACTCTCTTGGGCTTGCAATTCAACCACTTTGAAGGAACGATTCCAACTACTTTTGGGAAGTTCCAAAAGATGCAACAATTACAATTGGATGGCAACAAGCTGTTAGGAAACATACCGCCCTTTATAGGCAATCTCAGTCAATTGTATTATTTGGATTTACATCATAATATGTTTAATGGAGATATTCCTCCAAGTATAGGGAACTGTCAACAATTACAATATCTAGAACTTTCGTGGAATAAGCTTAGAGGAACCATTCCTTTAGAGGTTTTTAACCTTTCTTCTTTATCAAACACATTGGATTTGTCACATAACTATTTGAGTGGTAGCTTACCAAGAGAAATGAGTATGCTAAAAAATATTGATATGCTAGATGTCTCTGAGAATCATCTATCGGGTGTTATTCCTACATCAATTGGTGAATGTATAGGCTTAGAATATCTTCTTTTGCAAGGAAACTCCTTTAATGGAACAATACCGTCTACTTTTGCTTCTCTCAAAGGCCTGCAATATTTAGACCTTTCAAGAAATCGATTGACCGGATCAATTCCCGATGTTATGCAAAACATCTCAATTTTAACATATTTGAATGTTTCTTTTAACATGTTGGAAGGTGAAGTACCAATAGATGGTGTGTTTGGAAATGCAACCCAAATATCACTTATTGGAAACAATAAGCTTTGTGGAGGTATTTCACAACTGCATCTACCACCATGCCCTATCAAGGGTAGGAAACAAGCAAAACACCATAAATTCAAATTGATAGCAGTGATAGTTAGTGTGGTTTCTTTTCTTCTAATACTTTTATTTGTTATAACTATCTACTGGATGAGAAAAAGAAATCCAAATAGGTCTTTTGATTCACCAACAATTGATCAACTAGCTAAGATTTCCTACCAAGACTTGCATCGAGGAACTAATGGTTTCTCGAATGAAAACTTGATCGGATCAGGAAGTTTTGGTTCTGTGTATAAAGGAAATCTTATGTCAGAAGATAATGTTGTTGCAGTAAAGGTCCTGAACCTCCAAAAGAAGGGAGCTCACAAGAGTTTCATTGTTGAATGTAATGCACTCAAAAACATACGACATCGAAATTTAGTCAAGATTTTAACATGTTGTGTTAGTACGGATTACAAAGGTCAAGAATTTAAAGCTCTAGTTTTTGATTACATGAAAAATGGAAGCTTAGAACAATGGTTGCATCCCGAGATTTTAAATGCTGAGCATCCAAAAACATTGAACCTTGGTCATAGATTAAACATCATTATCGATGTTGCATCTGCATTACATTATCTTCATCAAGATTGTGAGCAAGTGGTCATTCATTCTGATCTAAAGCCAAGCAATGTCCTTCTTGATGATGACATGGTTGCTCATGTGAGTGATTTTGGCATAGCTAAACTTGTCTCAGCCATTGGCGGTACCTCTCATAAGAATACTAGTACAATTGGATTAAAAGGAACTGTTGGCTATACTCCTCCAGAGTATGGAATGGGTTCTGAAGTGTCCACATCTGGGGACATGTACAGTTTTGGAATCTTTTTGTTGGAAGTTCTTACTGGTAGAAGACCCACCGATGAAGCTTTTGAAAATGGTCAAAATCTGCATGACTTTGTTGCAGTATCATTTCCAGATAATGTTATAAAGATTTTGGACCCACATCTTATATTTAGAGATGGAGAAGTAGAAATAGAAGATGGAAATCATGAGAATCTTGCTCCAAATATAGAGGAGGGATTAGTTTCACTTTTAAGGATTGGACTTACTTGTTCAATGGAATCACCAAAAGAAAGAATGAATATTGGTGATGTCACTAGAGAGCTTACCATAATCAAAAATGCATTTTTCCCTGGTGTTGACACTCATAACAAGTACCTAAAGCTGGACTAA 3171 0.3554 MDACYVLPHTYQIQIKSYNIHLLLFHQMKPFSLLAYLHVVFLFTVNLIWFGPNKIVAVSLGNQTDYLALLKFKESISSYPYGTLESWNTSIHFCKWHGITCSPMHQRVIDLNLEGYQLHGSLSPHVGNLSYLINLNLNNNSFFGEIPQELGRLLQLQQLHLADNSFTGEIPTNLTYCSNLKGLFLAGNSLIGKIPIEIGSLRKLQSFNFWKNNLTGGIPSFIGNLSFLTVLVFDYNNLEGDIPQEICALKNLTILTGAVNNLSGMIPSCLYNMSSLTALVTEKNKIYGSLPPNLFHTLPKLEHFLIGGNQFSGPIPTSIINASSFVEFDISQNQFVGQVPNLERLKDLQYLNLEYNHLGGNSTNDLEFLHSLANCTKLYMFSMFHNNFQGVLPKAIGNLSIELNELYLGFNNISGKIPAELGYLTGLTLLGLQFNHFEGTIPTTFGKFQKMQQLQLDGNKLLGNIPPFIGNLSQLYYLDLHHNMFNGDIPPSIGNCQQLQYLELSWNKLRGTIPLEVFNLSSLSNTLDLSHNYLSGSLPREMSMLKNIDMLDVSENHLSGVIPTSIGECIGLEYLLLQGNSFNGTIPSTFASLKGLQYLDLSRNRLTGSIPDVMQNISILTYLNVSFNMLEGEVPIDGVFGNATQISLIGNNKLCGGISQLHLPPCPIKGRKQAKHHKFKLIAVIVSVVSFLLILLFVITIYWMRKRNPNRSFDSPTIDQLAKISYQDLHRGTNGFSNENLIGSGSFGSVYKGNLMSEDNVVAVKVLNLQKKGAHKSFIVECNALKNIRHRNLVKILTCCVSTDYKGQEFKALVFDYMKNGSLEQWLHPEILNAEHPKTLNLGHRLNIIIDVASALHYLHQDCEQVVIHSDLKPSNVLLDDDMVAHVSDFGIAKLVSAIGGTSHKNTSTIGLKGTVGYTPPEYGMGSEVSTSGDMYSFGIFLLEVLTGRRPTDEAFENGQNLHDFVAVSFPDNVIKILDPHLIFRDGEVEIEDGNHENLAPNIEEGLVSLLRIGLTCSMESPKERMNIGDVTRELTIIKNAFFPGVDTHNKYLKLD 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05748 1056 Pfam Leucine rich repeat 571 630 IPR001611 GO:0005515
Vivi2g05748 1056 FunFam Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 64 175 - -
Vivi2g05748 1056 SUPERFAMILY Protein kinase-like (PK-like) 710 1038 IPR011009 -
Vivi2g05748 1056 Gene3D Ribonuclease Inhibitor 62 343 IPR032675 -
Vivi2g05748 1056 SMART LRR_typ_2 153 177 IPR003591 -
Vivi2g05748 1056 SMART LRR_typ_2 225 249 IPR003591 -
Vivi2g05748 1056 SMART LRR_typ_2 593 616 IPR003591 -
Vivi2g05748 1056 SMART LRR_typ_2 520 545 IPR003591 -
Vivi2g05748 1056 SMART LRR_typ_2 472 496 IPR003591 -
Vivi2g05748 1056 SMART LRR_typ_2 273 297 IPR003591 -
Vivi2g05748 1056 SMART LRR_typ_2 424 447 IPR003591 -
Vivi2g05748 1056 FunFam LRR receptor-like serine/threonine-protein kinase EFR 364 672 - -
Vivi2g05748 1056 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 370 1036 - -
Vivi2g05748 1056 SMART serkin_6 736 1043 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g05748 1056 ProSitePatterns Serine/Threonine protein kinases active-site signature. 867 879 IPR008271 GO:0004672|GO:0006468
Vivi2g05748 1056 FunFam LRR receptor-like serine/threonine-protein kinase EFR 707 817 - -
Vivi2g05748 1056 Gene3D Phosphorylase Kinase; domain 1 700 817 - -
Vivi2g05748 1056 ProSitePatterns Protein kinases ATP-binding region signature. 742 765 IPR017441 GO:0005524
Vivi2g05748 1056 Gene3D Ribonuclease Inhibitor 345 675 IPR032675 -
Vivi2g05748 1056 SUPERFAMILY L domain-like 63 358 - -
Vivi2g05748 1056 FunFam Piriformospora indica-insensitive protein 2 194 292 - -
Vivi2g05748 1056 Gene3D Transferase(Phosphotransferase) domain 1 818 1044 - -
Vivi2g05748 1056 Pfam Leucine rich repeat N-terminal domain 63 102 IPR013210 -
Vivi2g05748 1056 Pfam Protein kinase domain 737 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g05748 1056 ProSiteProfiles Protein kinase domain profile. 736 1043 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g05748 1056 SUPERFAMILY L domain-like 403 656 - -
Vivi2g05748 1056 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 818 1046 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05748 Vivi-Chr2 187123479 187127703 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05748 62 1048 Receptor kinase-like Gene Family AT3G47570 44.990 0.0 815
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Vivi2g05748 Pkinase 1.9e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05748 - - gmx:100801459 1299.26