Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05747 ATGCATGCTTCTTATGTATTACCACATAGTTATCAAATCCACAGCATAAACTTCTTTCTGCACCAAATGAAGCCTCTTTCTTTATTGGCACCTGTACTCTTCTACCTTCATCTTCTTTTTCTGTTTACCTTAAATGTAATGTGGGTTGGTCCAAACCAAATTGTGGCAGTAACATTAGGAAACCAAACAGATCATTTGGCATTACTCAAATTCAAAGAATCAATATCTAGTTATCCATATGGAACTCTTGAATCTTGGAATACTTCCATCCACTTCTGCAAGTGGCATGGAATCACATGCAGCCCCATGCATCAAAGAGTTATAGACTTGAACTTAGAAGGAAATCAGTTACACGGATCTTTATCTCCCTATGTTGGCAATCTCTCTTTTCTGATAAGTCTCAACCTTAACAACAACAGCTTCTTTGGAGAAATACCACAGGAGTTGGGCCAGTTGCTACAATTGCAACAACTTCGTCTTTCCCATAACTCGTTCGCAGGTGAAATTCCTACAAACTTGACATATTGCTCCAATCTCAAAGGCTTGATTTTGGTAGGAAACAATTTGATTGGAAAAATACCGATTGAAATTGGCTCTTTGAAAAAGCTTCAAGCATTCAACCTTTTGAAAAATAATTTAACTGGAGGAATCCCCTCATTCATAGGGAATCTTTCACGCTTAAATTTTTTAGTATTTGACTATAACAACTTAGAGGGACATATTCCACAAGAAGTATGTCGCCTCACAAACGTGTCAATTTTAAGTTGGGGTAGGAACAATTTATCTGGTATGATTCCCCCTTGTGTTTACAATATCTCGTCACTTACTATGCTGTTAACAGCATTAAATAATATTCATGGTTCTCTTCCACCCAATATGTTCCACACCCTCCCCAATCTCCAACATTTTCAAATTGGCGGGAATCAAATCTCTGGCACTATTCCAACTTCAATTATAAATTCATCTTCCATTGTAAAGATTGATATGAGTCGAAATTTTTTTGTTGGACAAGTTCCAAATCTCGATAGGCTAAAAGATTTGATTTATTTGAATTTGGAATTCAACAATTTAGGTGGAAATTCAACTAATGATTTGTATTTTTTTAAATCTTTGACAAATTGTAGTAAATTGTCTCTGGTTTCTATATCCGATAATAGTTTTGGTGGCACTCTGCCAAATGCCATAGGCAATTTATCCACTGAACTCAATATGCTACATCTTGGGTTTAATGAGATATCAGGAAAAATTCCTGCAGAGTTAGGAAATCTAGTTGGTTTAATTGCCTTGCCCATGTCATTCAACCACTTTGAGGGAATTATTCCAACTACTTTTGGGAAGTTCCAAAAGATGCAACAATTACAAATGGGTGGAAACAAGCTGATAGGAAATATACCACCCTTTATCGGCAATCTCAGTCAATTGTATTATTTGGATTTACAACTTAATATGTTTGATGGAAATATTCCTCCAAGTATAGTAAACTGCCAACAATTACAATATCTAGATTTTTCGCAAAATAAGCTTATAGGAACCATACCTTTAGAGGTTTTTAAGCTTTCTTCTTTATCAATCTTGTTGAATTTGTCACATAACTTTTTGAGTGGAATCTTACCGAGAGAAGTTGGCATGCTTAAAAATATTGGTTCGCTGGATGTCTCTGGGAATCATCTATCTGGAGATATTCCTACAACAATCGGTGAATGCACAAGCTTAGAGTATATCCTTTTGCAAGCAAACTTCTTTAATGGAACAATACCATCTACTTTGGCTTCTCTCAAAGGTCTTCGGTATTTAGACCTTTCAAGAAATCATTTGACAGGATCAATTCCTGATATTATGCAAAATATCTCAGTTTTGGAACATATTAATGTTTCTTTTAACATGTTGGAAGGCGAGGTACCAATAGATGGTGTCTTTAGAAACGCAAGCCAAATAGCAATTTTTGGAAACAATAAGCTTTGTGGAGGAATTTTACAGCTGCATCTACAACCATGCCCTATAAAAGGTAGGAGACAGGAAAATCACCATAAATTCAAGTTGATAGTACTGATAGTTAGTGGAGTTTGTTTTATTCTCATACTTTCATTTGCTATAACTATCTACTTGATGAAGAAAAGAAATAAAAAACAATCATCGGATTCAGCATCAATTGATCAACTAGCTAAGGTTTCATACCAAGACTTGCATCGAGGAACTAATGGTTTCTCGAATGAAAACTTGATCGGATCAGGGAGTTTTGGTTCTGTGTATAAAGGAAATCTTGTATCAGAAGATAGTGTTGTTGCCGTAAAGGTCCTGAACCTTCAAAAGAAGGGAGCTCACAAGAGTTTCATTGTTGAATGTAATGCACTCAAAAACATAAGGCATCGAAATGTAGTCAAGATTTTAACATGCTGTGTTAGTACGGATTACAAAGGTCAAGAATTTAGAGCTCTAGTCTTTGATTACATGAAAAATGGAAGCTTAGAACAATGGCTGCATCCCGAAATTCTAAATGTTGAGCATCCACCAAAATTGAACCTTGGTCATAGATTAATCATCATTATCGATGTTGCATCTGCATTACAGTATCTTCATCAAGAATGTGAGCAAGTAGTCATTCATTCTGATCTAAAGCCAAGCAATGTTCTTCTTGATGATGACATGGTTGCTCATGTGAGTGATTTTGGCATAGCAAGACTTGTCTCAGCCATTGACGCTACCTCTCCTAAGAATACTAGTACAGTTGGAATAAAAGGGACAGTTGGCTATACTCCTCCAGAGTATGGAATGGGTTCTAAAGTGTCCACATGTGGTGACATGTATAGCTTTGGAATCCTTCTGTTGGAAGTTCTTACCGGTAGAAGACCCACCGATGAAACTTTTGAAAACGGTCAAAATCTGCATAACTTTGTTGCAAGATCATTTCCTGATAATCTTATAGAGATTTTGGACCCATGTCTTGTACCTAGTTATGGAGAAGTTGAAATAGAAGATGGATATCATCAGAATCTTGCTCCAAATGTAGAGGAGGGTTTAGTTTCCCTTTTTAGGATTGGACTTACTTGTTCAATGGAGTCACCTAAAGAAAGAATGAATATTGTTGTTGTCACTAGGGAGCTTAGCATAATCAAAAAGACCTTTTTTCCAGGTGTTCACTAG 3141 0.3617 MHASYVLPHSYQIHSINFFLHQMKPLSLLAPVLFYLHLLFLFTLNVMWVGPNQIVAVTLGNQTDHLALLKFKESISSYPYGTLESWNTSIHFCKWHGITCSPMHQRVIDLNLEGNQLHGSLSPYVGNLSFLISLNLNNNSFFGEIPQELGQLLQLQQLRLSHNSFAGEIPTNLTYCSNLKGLILVGNNLIGKIPIEIGSLKKLQAFNLLKNNLTGGIPSFIGNLSRLNFLVFDYNNLEGHIPQEVCRLTNVSILSWGRNNLSGMIPPCVYNISSLTMLLTALNNIHGSLPPNMFHTLPNLQHFQIGGNQISGTIPTSIINSSSIVKIDMSRNFFVGQVPNLDRLKDLIYLNLEFNNLGGNSTNDLYFFKSLTNCSKLSLVSISDNSFGGTLPNAIGNLSTELNMLHLGFNEISGKIPAELGNLVGLIALPMSFNHFEGIIPTTFGKFQKMQQLQMGGNKLIGNIPPFIGNLSQLYYLDLQLNMFDGNIPPSIVNCQQLQYLDFSQNKLIGTIPLEVFKLSSLSILLNLSHNFLSGILPREVGMLKNIGSLDVSGNHLSGDIPTTIGECTSLEYILLQANFFNGTIPSTLASLKGLRYLDLSRNHLTGSIPDIMQNISVLEHINVSFNMLEGEVPIDGVFRNASQIAIFGNNKLCGGILQLHLQPCPIKGRRQENHHKFKLIVLIVSGVCFILILSFAITIYLMKKRNKKQSSDSASIDQLAKVSYQDLHRGTNGFSNENLIGSGSFGSVYKGNLVSEDSVVAVKVLNLQKKGAHKSFIVECNALKNIRHRNVVKILTCCVSTDYKGQEFRALVFDYMKNGSLEQWLHPEILNVEHPPKLNLGHRLIIIIDVASALQYLHQECEQVVIHSDLKPSNVLLDDDMVAHVSDFGIARLVSAIDATSPKNTSTVGIKGTVGYTPPEYGMGSKVSTCGDMYSFGILLLEVLTGRRPTDETFENGQNLHNFVARSFPDNLIEILDPCLVPSYGEVEIEDGYHQNLAPNVEEGLVSLFRIGLTCSMESPKERMNIVVVTRELSIIKKTFFPGVH 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05747 1046 Gene3D Transferase(Phosphotransferase) domain 1 817 1041 - -
Vivi2g05747 1046 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 369 1035 - -
Vivi2g05747 1046 Pfam Protein kinase domain 736 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g05747 1046 Gene3D Ribonuclease Inhibitor 221 370 IPR032675 -
Vivi2g05747 1046 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 101 367 - -
Vivi2g05747 1046 SMART serkin_6 735 1042 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g05747 1046 ProSitePatterns Serine/Threonine protein kinases active-site signature. 866 878 IPR008271 GO:0004672|GO:0006468
Vivi2g05747 1046 FunFam LRR receptor-like serine/threonine-protein kinase EFR 368 671 - -
Vivi2g05747 1046 Gene3D Ribonuclease Inhibitor 61 219 IPR032675 -
Vivi2g05747 1046 SMART LRR_typ_2 592 615 IPR003591 -
Vivi2g05747 1046 SMART LRR_typ_2 544 568 IPR003591 -
Vivi2g05747 1046 SMART LRR_typ_2 224 248 IPR003591 -
Vivi2g05747 1046 SMART LRR_typ_2 297 321 IPR003591 -
Vivi2g05747 1046 SMART LRR_typ_2 128 152 IPR003591 -
Vivi2g05747 1046 SMART LRR_typ_2 519 543 IPR003591 -
Vivi2g05747 1046 SMART LRR_typ_2 471 495 IPR003591 -
Vivi2g05747 1046 Pfam Leucine rich repeat 570 629 IPR001611 GO:0005515
Vivi2g05747 1046 ProSitePatterns Protein kinases ATP-binding region signature. 741 764 IPR017441 GO:0005524
Vivi2g05747 1046 FunFam LRR receptor-like serine/threonine-protein kinase EFR 705 816 - -
Vivi2g05747 1046 Gene3D Phosphorylase Kinase; domain 1 697 816 - -
Vivi2g05747 1046 SUPERFAMILY L domain-like 62 357 - -
Vivi2g05747 1046 Pfam Leucine rich repeat N-terminal domain 62 101 IPR013210 -
Vivi2g05747 1046 ProSiteProfiles Protein kinase domain profile. 735 1042 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g05747 1046 SUPERFAMILY L domain-like 402 655 - -
Vivi2g05747 1046 Gene3D Ribonuclease Inhibitor 371 674 IPR032675 -
Vivi2g05747 1046 SUPERFAMILY Protein kinase-like (PK-like) 709 1034 IPR011009 -
Vivi2g05747 1046 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 817 1044 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05747 Vivi-Chr2 187113193 187120147 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05747 61 1042 Receptor kinase-like Gene Family AT3G47570 45.015 0.0 823
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Vivi2g05747 Pkinase 1.9e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05747 - - gmx:100801459 1256.12