Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05745 ATGGAAATTGAACCGAGTTATAAACCTACAACACTAGGAAACGAACCATCTTCAAATATACCATCTTTGAGTCCATTGAGTGAAACCCTTTGGAGAGAAAAGGCGAAAACCGAGTTCATCGGAGACGTTTCGGCACGATTAACATGGAAAGATTTAACTGTCATGGTAACCCTAAGCAATGGTGAAACACAGAATGTGCTAGAGAATTTAACTGGCTATGCTGAACCAGGATGTTTTACTGCTCTTATGGGACCCTCAGGTTCTGGAAAATCAACTCTTCTAGATGCACTTTCTAGTCGTTTGGCTTCTAATGCTTTTCTTTCTGGTACTATTCTTCTTAATGGTCGCAAAGAAAAGCTATCTTTTGGAACTGCTGCTTATGTGACACAAGATGACAATTTGATTGGAACCTTAACAGTGAGAGAAACAATATGGTATTCAGCTAGATTAAGATTACCAGATAAAATGTCAAGATCAGATAAAAGAGCATTAGTTGAGAGCACAATAGTTGCAATGGGACTTCAAGATTGTGCAGACACAGTTATTGGTAATTGGCATTTAAGAGGAATAAGTGGTGGTGAAAAGAGAAGAGTTAGTATTGCTTTGGAAATATTAATGAGGCCTAGATTGCTTTTCCTTGATGAACCAACCAGTGGACTTGACAGTGCTTCAGCTTTCTTTGTGACTCAAACACTACGTGCATTAGCAAGAGATGGAAGAACAGTGATAGCTTCAATTCATCAACCTAGCAGTGAAGTGTTTGAATTATTTGATCAATTGTATTTGCTTTCTGGTGGCAAAACTGTTTATTTTGGGCAAGCTTCTGAGGCATATGAGTTCTTTGAACAAGCTGGATTTCCATGCCCTGCTCTGAGGAACCCTTCTGATCATTTTCTTAGATGCATCAATTCTGACTTTGATAAAGTCAAAGCCACTCTCAAAGGGTCAATGAAATTGAGGTTTGAAGGAAGTGATGATCCTCTAGACAAGATCACAACTGCTGAAGCTATCAGAACTCTCATCGATTTCTACCGTACTTCTCAGCACTCTTATGCTGCAAGACAAAAAGTCGATGAAATTTCCAAAGTCCGAGGGACAGTGCTAGAAGCAGGAGGAAGTGAAGCTAGCTTCTTGTTGCAGACATACATATTAACCAAACGTTCGTTCATTAACATGTCAAGGGATTTTGGTTACTATTGGCTTCGGCTCGTAATCTACATTGTTGTCACTATCTGCATCGGAACTATTTACTTGAATGTTGGCACCGGCTATAACTCTATTCTGGCTAGGGGTTCATGCGCGTCTTTTGTCTTCGGTTTCGTTACCTTCATGTCAATTGGTGGATTTCCTTCGTTTGTTGAAGATATGAAAGTTTTTCAAAGGGAGAGGCTTAATGGACATTATGGTGTGACTGCATTTGTTATCAGCAATACATTATCTGCTACACCATTTTTGATATTAATCACTTTTCTCTCTGGAACAATTTGTTACTTCATGGTTCAACTACATCCTGGATTTTCGCATTACGTATTCTTTGTGCTGTGTCTTTATGCAAGTGTCACAGTTGTTGAAAGCTTGATGATGGCAATTGCTAGTATTGTCCCTAACTTTCTCATGGGAATCATCATTGGAGCAGGGATTCAGGGCATATTCATGTTGGTGTCCGGCTACTTTAGGCTTCCACATGATATCCCGAAACCAGTTTGGCGCTATCCAATGTCATACATCAGTTTCCACTTTTGGGCATTACAGGGTCAATACCAGAACGATCTGAACGGTTTAATATTCGACAACCAAACACCCGATCTTCCAAAGATACCTGGCGAATACATCTTGGAGTATGTATTCCAGATCGACGTGAAAAGATCAAAATGGATAGATTTAAGTGTGATCTTAAGCATGATTATCATATACCGCATTATTTTCTTCATCATGATCAAAATCAATGAAGATGTTACTCCTTGGGTTAGAGGGTATCTTGCTAGGAGAAGAATGCAGCAAAAGAGTGGAGCACAAAATACAACTATTGCACCTGATGTTCTCACTCAATCTCCATCCTTGAGAACCTATATTTCGAATCAAAAATAG 2088 0.3932 MEIEPSYKPTTLGNEPSSNIPSLSPLSETLWREKAKTEFIGDVSARLTWKDLTVMVTLSNGETQNVLENLTGYAEPGCFTALMGPSGSGKSTLLDALSSRLASNAFLSGTILLNGRKEKLSFGTAAYVTQDDNLIGTLTVRETIWYSARLRLPDKMSRSDKRALVESTIVAMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALARDGRTVIASIHQPSSEVFELFDQLYLLSGGKTVYFGQASEAYEFFEQAGFPCPALRNPSDHFLRCINSDFDKVKATLKGSMKLRFEGSDDPLDKITTAEAIRTLIDFYRTSQHSYAARQKVDEISKVRGTVLEAGGSEASFLLQTYILTKRSFINMSRDFGYYWLRLVIYIVVTICIGTIYLNVGTGYNSILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVTAFVISNTLSATPFLILITFLSGTICYFMVQLHPGFSHYVFFVLCLYASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLVSGYFRLPHDIPKPVWRYPMSYISFHFWALQGQYQNDLNGLIFDNQTPDLPKIPGEYILEYVFQIDVKRSKWIDLSVILSMIIIYRIIFFIMIKINEDVTPWVRGYLARRRMQQKSGAQNTTIAPDVLTQSPSLRTYISNQK 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05745 695 FunFam ABC transporter G family member 11 41 284 - -
Vivi2g05745 695 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 47 290 IPR003439 GO:0005524
Vivi2g05745 695 Pfam ABC-2 type transporter 247 303 IPR043926 GO:0140359
Vivi2g05745 695 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 36 668 - -
Vivi2g05745 695 ProSitePatterns ABC transporters family signature. 190 204 IPR017871 GO:0005524|GO:0016887
Vivi2g05745 695 MobiDBLite consensus disorder prediction 1 23 - -
Vivi2g05745 695 Pfam ABC transporter 67 218 IPR003439 GO:0005524
Vivi2g05745 695 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 286 IPR027417 -
Vivi2g05745 695 CDD ABCG_EPDR 44 272 - -
Vivi2g05745 695 Gene3D - 41 285 IPR027417 -
Vivi2g05745 695 SMART AAA_5 76 247 IPR003593 GO:0016887
Vivi2g05745 695 Pfam ABC-2 type transporter 380 586 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05745 Vivi-Chr2 187067399 187074806 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05745 65 251 Calmodulin-binding Proteins AT2G36910 32.828 9.41e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05745 K05681 - gmx:100816389 1248.42