Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05669 ATGGAGTGCAACAAGGATGAGGCCACCAGAGCTAAAGAAATCGCCGAGAGGAAGTTTACGGAAAAAGACATTTCGGGTGCAAAGAAGTTTGCTTTGAAAGCCCAAAATTTGTTTCCTTCCCTTGAAGGTATTCCTCAAATGATAGCAACACTTGACGTATATATTTCAGCTGAGAATAAAGTAAAAGGAGAAGCAGATTGGTATGGCATACTTGGTGTGGGCCCTCATTCGGATGACGATACAGTTAGGAGATATTATAGAAAGCTAGCTCTCATGCTTCACCCTGACAAGAACAAATCCATTGGAGCCGACGGGGCCTTTAAACTTATTTCGGAGGCGTGGAGTATACTGTCCGACAAGGCTAAAAGAGCAGCTTATGATGAAAAGATAAATGCAAAAGCACATAAAGGCTCAGCCATTTTCGGTGGTTCGTCAGCAAAAGCGGCGGCAAATGGGGCTAACAGTAGTAAAAAGAAAACCCCTTCAAGTGGAAAGATTCCGAAGAATACTGCTAAAGAAAATACATCATCTTCCAATAAATCAAAAGCCACATTTTGGACTACTTGCAAACGCTGTAAAATGCAATACGAGTATCTCAGAGTTTATCTTAATCTTAAACTCGTGTGTCCCAGCTGCCATGAAGCATTTTTGGCTGTAGAAACTGATCCGCCTCCTGCAAGTGGTATCAGACCTGGAACATCGTGGCTTTTTAAACAAAAGCACGACAACGGAGGTAAAAACAAATCTGCTGTTGGAAAGAACAACACAGCACCTCCAAATGCTGGAGCAGGGTCTAACAAGAACAGCTTCCAGTGGGCCCCATTCTCTAAAACTTCTGGTGTTTCTGATGTAGCTCAAGCGGCAAATGTAGTTCAGCAGGCTTATGAGAAGGTGAGGCGAGATCGTGAGGAGGCACAAGCAACTACCAAAAAGGAAGAGGCTTTGAAAAGGAAGCAGAATGCTTCGAAAAAAGGTTACTTTAATCCAGCTAAGAGGAAAAGAAAGGGCATGGATGGAAATGGAGCAGTTGGAGTGTCTAACTTAGGCAGTGGAATCAAGTTCAACTGTACTAGAGATCTCTCCCCAGTTGAACTTCAGAATCTTCTTGTCGAGAAAGCTAGAAAAGAAATTAGCAAGAAACTCAAAGAGTTTCAGTCAAATACTGTTGACAAATCAGCAGCAAACCGGAAAGGAGATTTTTCAGCAAGAAACTTTGAGTTCTGCACTCAAAATAACATTGGGAAGTCAGAAGGTGCGAAGAGTAGTCTGCATGCTGCTCCTATCATTGATAACAAGTGCCCTGAAATTTTGGATTCAATGCTAGTAGATGTTCCAGATCCTGATTTTCATGATTTTTACAAGGATCGAACTGAAAGGTCTTTTGGTGAAAATCAAGTATGGGCTGCATATGATGGTGATGATGGGATGCCTCGACATTATGCTATGATTCACAGAGTGATCTCGATGAATCCATTCAAGATGCAGATCAGTTGGCTGTACCCAAATATCAACGATGGTGAACCAGGCCCTCTAAATTGGGTTGCTTTTGGCTTTTCAAAAACTTGTGGGCAGTTCAGATTAGGCAAACGCGAAATCTATAACTCAATCAATTATTTTTCTCAGAAGGTTAGATGGGAAAAAGGTAACGATGGAGCCATTTCCATAAATCCCAAAAAAGGGGAGGTTTGGGCCATCTATAGGAATTGGTCTCCTAGTTGGAATGATCTAATAGCAGATGATGTAAAACACAAGTTTGACATGGTTGAAGTACTCGAGGATTTTGTTGAAGAACGGGGTGTAACGGTTATTCCTCTGGTCAAGGTGGCTGGTTTCAAGGCAGTATTTCACCACCACTTAAATGAGAAAGAGATCAAGATCATTCCGAGGAAGGAGATGCTTCGATTCTCTCATCAGGTACCTTCACACGTACTCACCGGTGAAGAAGCTCCTAACGCTCCAAAGGGTTGCAGGGTGCTGGACCCAGCTGCTACTCCATGTGAACTTCTCGAGGTTATAAAAGTTGCAGAGGAGGAAAACATGGACAATGTGGATAGAATTATAAAAGAAACTAATCATGAGGAAATGATCGTTGATACGGGAAAACTTGGGGGAACAAAGGAGAGAATGAAGAAAGTTATCCATAAAATAGAAACTCCAAAAGAGGACAGAGGGAAGAAGATATGCCGAGGCTTGTAG 2196 0.4221 MECNKDEATRAKEIAERKFTEKDISGAKKFALKAQNLFPSLEGIPQMIATLDVYISAENKVKGEADWYGILGVGPHSDDDTVRRYYRKLALMLHPDKNKSIGADGAFKLISEAWSILSDKAKRAAYDEKINAKAHKGSAIFGGSSAKAAANGANSSKKKTPSSGKIPKNTAKENTSSSNKSKATFWTTCKRCKMQYEYLRVYLNLKLVCPSCHEAFLAVETDPPPASGIRPGTSWLFKQKHDNGGKNKSAVGKNNTAPPNAGAGSNKNSFQWAPFSKTSGVSDVAQAANVVQQAYEKVRRDREEAQATTKKEEALKRKQNASKKGYFNPAKRKRKGMDGNGAVGVSNLGSGIKFNCTRDLSPVELQNLLVEKARKEISKKLKEFQSNTVDKSAANRKGDFSARNFEFCTQNNIGKSEGAKSSLHAAPIIDNKCPEILDSMLVDVPDPDFHDFYKDRTERSFGENQVWAAYDGDDGMPRHYAMIHRVISMNPFKMQISWLYPNINDGEPGPLNWVAFGFSKTCGQFRLGKREIYNSINYFSQKVRWEKGNDGAISINPKKGEVWAIYRNWSPSWNDLIADDVKHKFDMVEVLEDFVEERGVTVIPLVKVAGFKAVFHHHLNEKEIKIIPRKEMLRFSHQVPSHVLTGEEAPNAPKGCRVLDPAATPCELLEVIKVAEEENMDNVDRIIKETNHEEMIVDTGKLGGTKERMKKVIHKIETPKEDRGKKICRGL 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05669 731 Coils Coil 288 324 - -
Vivi2g05669 731 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Vivi2g05669 731 SMART dnaj_3 65 122 IPR001623 -
Vivi2g05669 731 MobiDBLite consensus disorder prediction 239 269 - -
Vivi2g05669 731 Pfam Domain of unknown function (DUF3444) 441 648 IPR024593 -
Vivi2g05669 731 MobiDBLite consensus disorder prediction 150 180 - -
Vivi2g05669 731 PANTHER BNAC03G44070D PROTEIN 1 665 - -
Vivi2g05669 731 SUPERFAMILY Chaperone J-domain 58 126 IPR036869 -
Vivi2g05669 731 MobiDBLite consensus disorder prediction 248 269 - -
Vivi2g05669 731 Gene3D DnaJ domain 63 183 IPR036869 -
Vivi2g05669 731 Pfam DnaJ domain 66 127 IPR001623 -
Vivi2g05669 731 CDD DnaJ 66 119 IPR001623 -
Vivi2g05669 731 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Vivi2g05669 731 PRINTS DnaJ domain signature 102 122 IPR001623 -
Vivi2g05669 731 PRINTS DnaJ domain signature 68 86 IPR001623 -
Vivi2g05669 731 PRINTS DnaJ domain signature 86 101 IPR001623 -
Vivi2g05669 731 PRINTS DnaJ domain signature 122 141 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05669 Vivi-Chr2 185006053 185012397 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05669 4 254 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.443 9.55e-34 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05669 - - lja:Lj2g3v0520120.1 955.281