Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05655 ATGGGTGAGAGAAGAGGCAATAGCACAAGTATTATTATAATTCTAATGTTATGTATGTTGGTGTTTCATTCTAAAATGATTTATGGAGAGACATACATAGTTGGTTATGATCAAGGTTGGCACACTGGTGTTATAAACTGGCCTCTAGGAAAAATTTTCTATGCAGGTGACATACTTGTATTTAATTACGACCCTTCGAAAGATAATGTTGTGAAAGTGACTGAGAGTGGCTATAAAACATGTTATCCTAGAGGAATTGCAACTTATAGGTCTGGAGCTGATAGAATTCCACTTGAGAAGGGAGGCAACTACTTCATAAGTGCTGGTCGTGGTCATTGTGACTTTGAACAGAAAATTGCAGTCATTGCTAATTAA 375 0.3653 MGERRGNSTSIIIILMLCMLVFHSKMIYGETYIVGYDQGWHTGVINWPLGKIFYAGDILVFNYDPSKDNVVKVTESGYKTCYPRGIATYRSGADRIPLEKGGNYFISAGRGHCDFEQKIAVIAN 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05655 124 Pfam Plastocyanin-like domain 46 116 IPR003245 GO:0009055
Vivi2g05655 124 SUPERFAMILY Cupredoxins 31 122 IPR008972 -
Vivi2g05655 124 ProSiteProfiles Phytocyanin domain profile. 30 124 IPR003245 GO:0009055
Vivi2g05655 124 PANTHER BLUE COPPER PROTEIN 24 121 IPR039391 GO:0009055
Vivi2g05655 124 Gene3D - 30 123 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05655 Vivi-Chr2 184767560 184768110 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05655 8 106 Phytocyanin Superfamily AT1G17800 41.905 1.29e-17 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05655 - - rcu:8288411 117.857