Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi2g05652 | ATGGAAGAAAGAGAGATTTTTGGTTCTGGGCATGGTGTGAATGTTAATCAGGTCCCACAGGGGTTCAACCTGGGTCAAAATCAGAATTCGTTGAGTTTTTCTGGGCCCACTGGTGAGGCTCCGGCTACTGTTCCGGTGAGTGCACCGGTTGGTGGTGGTATGGAGGTGAAGAAGAAGAGGGGTAGGCCTAGGAAGACTGAATCTGGAAGTAAACCGGCGCTGTCTCCGATGCCGATTTCGGCGTCGATTCCGTTGACTGGAGATTTCTCTGGGTGGAAAAGTGGTGGAGGGAAGCCTTTTGAATCAATCAAGAAGCCTCTGAAGTTAAATGATTTTGATGAAGATGATAGAACAGCTCCACCTAGTTCCAATTTCAAAACTCATGTGCTTACCGTAAATTCCGGAGAGGATCTCTCTATGAAAATAATGTCTCTTTCTCAACAAGAGAATCATACTATATCTATTCTCACGGCAACTGGCACAATTTCGAATGTCACACTTCGCCAGTCGGATGCTTGTGGAGGTACTTCGACATATGAGGGAGTTTTTGAGATTCTTTCCTTGAGCGGATCATTTGTGCCAACCGAGAATGGATTGACAAAGAGCAGAGCTGGAAGAATGAGTGTCTCTCTGGCAGGTCCAAATGGCCGTGTTTTCGGGGGCGCGCTCGCTGGTTTGCTGGTAGCTGCTGGTTCTGTGCAGGTTGTGGTTGCGAGTTTCCTTCCGGATCATCAGAAACCGAAGAAGCAACGTATCGATCATATGTCACCAACCGCCCCTCCTACATCAACTCATATTAACAATCATGCATCTGATGAATTGAAAACCGATCTCGGTGGAATGAAGCCTATCATGTCACCGGCCGGCTTTAACTTCGCTACATTCGGTAATGGCCAGGGCTCTGGCAACTCATCATCATCTGGCGATGATGACGAGCATGTCCAACCCTAG | 951 | 0.4784 | MEEREIFGSGHGVNVNQVPQGFNLGQNQNSLSFSGPTGEAPATVPVSAPVGGGMEVKKKRGRPRKTESGSKPALSPMPISASIPLTGDFSGWKSGGGKPFESIKKPLKLNDFDEDDRTAPPSSNFKTHVLTVNSGEDLSMKIMSLSQQENHTISILTATGTISNVTLRQSDACGGTSTYEGVFEILSLSGSFVPTENGLTKSRAGRMSVSLAGPNGRVFGGALAGLLVAAGSVQVVVASFLPDHQKPKKQRIDHMSPTAPPTSTHINNHASDELKTDLGGMKPIMSPAGFNFATFGNGQGSGNSSSSGDDDEHVQP | 316 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi2g05652 | 316 | MobiDBLite | consensus disorder prediction | 245 | 316 | - | - | |
Vivi2g05652 | 316 | ProSiteProfiles | PPC domain profile profile. | 121 | 262 | IPR005175 | - | |
Vivi2g05652 | 316 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 126 | 240 | IPR005175 | - | |
Vivi2g05652 | 316 | MobiDBLite | consensus disorder prediction | 1 | 80 | - | - | |
Vivi2g05652 | 316 | MobiDBLite | consensus disorder prediction | 292 | 316 | - | - | |
Vivi2g05652 | 316 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 38 | 299 | IPR039605 | GO:0003680 | |
Vivi2g05652 | 316 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 123 | 243 | - | - | |
Vivi2g05652 | 316 | Gene3D | - | 126 | 255 | - | - | |
Vivi2g05652 | 316 | MobiDBLite | consensus disorder prediction | 13 | 37 | - | - | |
Vivi2g05652 | 316 | CDD | DUF296 | 126 | 240 | IPR005175 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi2g05652 | Vivi-Chr2 | 184719849 | 184723314 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi2g05652 | 56 | 251 | AT-hook Motif Nuclear Localized (AHL) Family | AT5G62260 | 55.140 | 2.04e-63 | 204 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi2g05652 | - | - | mtr:11422923 | 475.707 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vivi2g05652 | 2 | 184719849 | 184723314 | Vivi1g06088 | 1 | 135577438 | 135581042 | ECH | |
Vivi2g05652 | 2 | 184719849 | 184723314 | Vivi2g05652 | 2 | 184719849 | 184723314 | ECH | |
Vivi2g05652 | 2 | 184719849 | 184723314 | Vivi1g06088 | 1 | 135577438 | 135581042 | PCT |