Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05606 ATGGATTACTCTAAAATTCTCCGTTTCTATTTCTTTGTTACATTCATGTGTTTTGCAACAATAAAGGCACAAGGTAGTCCTACTTTCTTGTATAATGTTTGTTCCGGAAACAAAACCACAGCCAATAGCACCTTCCATGTCAATCTTATGACCCTCCTCTCTTCTTTGTCATCAAAATCCATTAGCAACATGGAATTCTATAGCACCACAGCCACTGCCATAAACGCCTCTGACTCTGTTTATGGATTGTTCATGTGCAGGGGGGATGTATCCTCCCAGCTTTGTCACGAATGCGTGGGTAATGCAACCCAAACACTATTCTCTGATACAGACTGCTCTTTGTCAAATCGAGCGGTGATTTGGTACGACGAGTGCATGGTTCGATACTCCAACAATTCTTTCTTTTCCATGGTTGCTACAAGCCCTGGTGTTTTCTTGATGAACACGGCCAACGTCTCAAACCCAAAAAGTTTCATGCCTTTATTGTCTTCAACTATGAATGAAACTGCAGAAAAAGCAGCAAGTCTCCTTTCTAGTTACAGTAACAAGATGTTTGCCACAAATGAATCAGAAGTTTCGAAATTTCAGACTCTTTACTGTCTAGTTCAGTGCACGCCGGATTTGTCGCCCAATGATTGCAGAACCTGTCTCAGTAGTGCTATTGAGTATCTTCCACAGTGTTGTGATGGAAAGCAGGGTGGGAGAGTTCTGTTTCCTAGTTGCAATATTAGGTACGAACTTTATCCTTTTTATAGCTCAGTTAATGCTTCCTCACCAAATGCTCGTGTTCCAGAAACAAATGATTCCAAAGAAGATGCAGGTTTTACACAAGATCCATTTTATCTTGACTATAATTGCCCAGGTGGCAAGAGTACAATCACTCAAAAAAACTTCAAATTACTTCTCTCTTATTTGTCTTCCAACGCCACAAGCAATAAATTTTCCTTAGTTAAAGTGGAAGACAAGGTGTACGGCCTATTTATGTGTCGAGGTGACCTCCCCCCTGGCCTCTGTGAAAGGTGCGTGAAAAACGCAACTGATCGAATATACTCAAGTTGTCACTCATCTCCAGAGGGTATAATTTGGTACAGTCACTGCTTGCTTCGCTACTCTAATAGGAATTTCTTCTCTGACATGAAAACTAGTCCTATGTATCGCCATATTAATACCACCACATATTCCTTCTCGGACCAAAATTTGTTCACTAGTAAATTATCAAATCAGTTATCTCAACAAGCGAATGATACAGGAGACACTGTGGAGAGATATTTGACGAGGTCATCAAAATTGAATGATGTACAAACCTTGTATACACTTGAACAATGTACTCGGGATTTGTCTGGTAGCCAATGCTCTTCATGTCTAAGTGATATAATCAGTTCATCAATTCCGTGGTCATTTTTGGGCAGTGTTGGAGGAAGAATTATATATCCTAGCTGCAATCTCAGGTTTGAATTGTTCCAATTTTACGACGATGTTGGTGAAGCTCAGTCGCCTGAGAGTCCTCCATTAGGAAATAAAGAGAAATGGAGAATTGTCGCCATCGTTGTTGCTATCATTATTTCGGTGATACTCTTTTCTATTGGCTACTATTATTTTCTGAGGAGAAAGGGAAGAAAGAGTCGTAGAACAATTCTCCGAGAAAATTTTGGGGAAGAAAGTGCCAGTTTGGAACCAATGCGATTCGACTGGGTGACAATTCAGGCAGCAACTAACAACTTTTCTAAAGATAATTACATTGGCAAAGGTGGATTTGGAGAAGTTTACAAGGGTATCCTTCAGGATGGACGAGCAGTCGCTATAAAGAGACTTTCAATAAATTCGAAACAAGGTGTTGAGGAGTTTAAGAACGAAGTTTTATTGATAGCTAAACTTCAACATAGAAATCTAGTAATATTTATTGGATTTTGTCTTGAGGAACACGAGAAAATACTTATTTATGAATTTGTGCCCAACAAGAGTCTTGATTACTTTTTATTCGATTCTCAATGCAAAAAGTTGTTAACTTGGGCTGAACGCTTCAACATCATTGGAGGAATTGTTCGAGGAATTCTTTATATGCATGAACATTCCAGACTCAAAGTTATCCATCGTGATCTCAAACCTAGTAATATTCTTTTAGATGAAAATATGATTCCTAAAATTTCTGATTTTGGTTTAGCTCGAATTGTTGAAATAAGTCAAGATGAAGGGACTACAAATAGAATTGTTGGGACATATGGTTATATGTCTCCGGAATATGGAATGCTCGGACAATTTTCTGAAAAATCAGACATTTATAGTTTTGGAGTCATGCTTTTAGAGATTATTGCAGGAAGAAAGAATATGAGTTCATATACACCCCACCATGGTGCTGAAGGGGTTAATGGGCTCTTGAATTATGTTTGGAGACAATGGAAGGATCAAACACCGTTGAGTATATTGGATCCAAATATTAAAGACGATTATTCAAAAATTGAAGTAACCAAATGCATTCAAATTGGTCTATTATGTGTTCAACATAACCCTGATGCGAGACCTTCAATGGTGACAATTGTTTCTTATCTTAGCAGTTATTCGATTGAATTACCAACTCCACAAGAACCTATATTTTTCTCAAGTGGTAGAACTAATTCAAAATCAGATGCCCAAGAATCAAATTCAGCTCAATCTGCAAACAGTTCGTCTCTATTCTCTATGAATGAAATGTCTATCACTAATTTTATTCCTAGATAG 2715 0.3805 MDYSKILRFYFFVTFMCFATIKAQGSPTFLYNVCSGNKTTANSTFHVNLMTLLSSLSSKSISNMEFYSTTATAINASDSVYGLFMCRGDVSSQLCHECVGNATQTLFSDTDCSLSNRAVIWYDECMVRYSNNSFFSMVATSPGVFLMNTANVSNPKSFMPLLSSTMNETAEKAASLLSSYSNKMFATNESEVSKFQTLYCLVQCTPDLSPNDCRTCLSSAIEYLPQCCDGKQGGRVLFPSCNIRYELYPFYSSVNASSPNARVPETNDSKEDAGFTQDPFYLDYNCPGGKSTITQKNFKLLLSYLSSNATSNKFSLVKVEDKVYGLFMCRGDLPPGLCERCVKNATDRIYSSCHSSPEGIIWYSHCLLRYSNRNFFSDMKTSPMYRHINTTTYSFSDQNLFTSKLSNQLSQQANDTGDTVERYLTRSSKLNDVQTLYTLEQCTRDLSGSQCSSCLSDIISSSIPWSFLGSVGGRIIYPSCNLRFELFQFYDDVGEAQSPESPPLGNKEKWRIVAIVVAIIISVILFSIGYYYFLRRKGRKSRRTILRENFGEESASLEPMRFDWVTIQAATNNFSKDNYIGKGGFGEVYKGILQDGRAVAIKRLSINSKQGVEEFKNEVLLIAKLQHRNLVIFIGFCLEEHEKILIYEFVPNKSLDYFLFDSQCKKLLTWAERFNIIGGIVRGILYMHEHSRLKVIHRDLKPSNILLDENMIPKISDFGLARIVEISQDEGTTNRIVGTYGYMSPEYGMLGQFSEKSDIYSFGVMLLEIIAGRKNMSSYTPHHGAEGVNGLLNYVWRQWKDQTPLSILDPNIKDDYSKIEVTKCIQIGLLCVQHNPDARPSMVTIVSYLSSYSIELPTPQEPIFFSSGRTNSKSDAQESNSAQSANSSSLFSMNEMSITNFIPR 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05606 904 FunFam Cysteine-rich receptor-like protein kinase 25 383 489 - -
Vivi2g05606 904 FunFam Cysteine-rich receptor-like protein kinase 25 142 250 - -
Vivi2g05606 904 ProSiteProfiles Gnk2-homologous domain profile. 276 375 IPR002902 -
Vivi2g05606 904 SUPERFAMILY Protein kinase-like (PK-like) 557 877 IPR011009 -
Vivi2g05606 904 Gene3D - 144 250 IPR038408 -
Vivi2g05606 904 Gene3D - 381 489 IPR038408 -
Vivi2g05606 904 Gene3D - 26 134 IPR038408 -
Vivi2g05606 904 Gene3D - 285 375 IPR038408 -
Vivi2g05606 904 ProSiteProfiles Gnk2-homologous domain profile. 381 489 IPR002902 -
Vivi2g05606 904 CDD STKc_IRAK 580 849 - -
Vivi2g05606 904 Pfam Protein kinase domain 575 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g05606 904 FunFam cysteine-rich receptor-like protein kinase 10 650 856 - -
Vivi2g05606 904 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 337 900 - -
Vivi2g05606 904 Pfam Salt stress response/antifungal 34 131 IPR002902 -
Vivi2g05606 904 Pfam Salt stress response/antifungal 396 485 IPR002902 -
Vivi2g05606 904 Pfam Salt stress response/antifungal 151 248 IPR002902 -
Vivi2g05606 904 Pfam Salt stress response/antifungal 295 372 IPR002902 -
Vivi2g05606 904 MobiDBLite consensus disorder prediction 865 887 - -
Vivi2g05606 904 ProSiteProfiles Protein kinase domain profile. 574 864 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g05606 904 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 27 133 - -
Vivi2g05606 904 Gene3D Transferase(Phosphotransferase) domain 1 650 858 - -
Vivi2g05606 904 Gene3D Phosphorylase Kinase; domain 1 537 649 - -
Vivi2g05606 904 ProSiteProfiles Gnk2-homologous domain profile. 140 250 IPR002902 -
Vivi2g05606 904 ProSiteProfiles Gnk2-homologous domain profile. 27 134 IPR002902 -
Vivi2g05606 904 ProSitePatterns Protein kinases ATP-binding region signature. 580 602 IPR017441 GO:0005524
Vivi2g05606 904 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 535 649 - -
Vivi2g05606 904 ProSitePatterns Serine/Threonine protein kinases active-site signature. 695 707 IPR008271 GO:0004672|GO:0006468
Vivi2g05606 904 SMART serkin_6 574 849 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05606 Vivi-Chr2 183815957 183820159 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05606 276 904 Receptor kinase-like Gene Family AT4G05200 41.185 4.07e-167 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi2g05606 Pkinase 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05606 - - vvo:131653217 1772.67