Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05584 ATGGGTAAGGAATGGAATTGGATTGGAAAATCATCCAAAAGAAGTGTTATAGTTGAAGAAAACCATGAAACAAAAACAACAACACCTAGTGGATGTATGTGTGCTGTTTTTCAGTTCTTTGATTTTCATCATTTTTCTAACTCAATAAACCATCAACAACAAATCACTTTCAAATCACCTTCTTCTACTACACTCCCAAAAGTTTCAGGTGGTGAAGCTCCTAGGAATAGCTTGGAATCTGAGGATAGCAGTGGTTCAGCTTCTCTATCAAAAGAAGAAAAGTTTAAAATTCCAAATATACAAATCAAAACAAAAAGGAGCAATGGTGGAATATTGACTGATTTGTCCTCAGAAATCAGTACTTCATCATCACCAGGAACAAAGACACCAACTTTGGTAGCAAGATTAATGGGTTTAGATATTCTTCCAAATTCAAATTCACCCTCCTTTTCTTCACCTCTTTCAACATTAAATTCACAAGGCAAGAACATTATTATTCAACATCTTCATCAAGTTAGAACAAAGCAACAACAATTTCAAACCAAATCAAGGAACAGCATTGATGGTAGTGAAACTACAAGAATACCCTCTTCTAGAAAATCAGATTTTGATCTACATAGACTGTCTCTTCAAATCAACAAAGAGAATTATAGTCTAGGTGATGAAGATTTTGAGCTGCCTAGACTCTCATTTTCAAAGAGGAAAATTGATGAGAATAGTTCTAAAAGTTCAAGTCACTATGCTAAGCAAATTGTGAAGCAAGTTAAGGAAAATGTTGTGAGTAGAAAAGTTGGTCAAGACATTACCAACAATCTCAAGAACATGCAGGATATCAATATCAAACAAAACACTAGAGTAACCAAGAAGTTACCAAGCAATGATCAATTACAAGGAAGAGAAGAATTTCTAGGACAATTAAGAGTCAAGAAATGTCCTAAAACAACATCATTCAAAGATTCAAACCCTAATTCATCAAGTTCGCCAAGGAGTAGACTCATTGACAACAAACACAAGCCAAACACAACAACAAAAACAACTTCAAAAGACAAAAACACAAAACCAAAAGCTAGTGCATTGAAACAAGAGCAAGAATCAAAGGACAAGAAACTAGTCGCATCAAATTGCAAGAAAGCTACAAATGAAAAGTTTAGTTCAAGATTCAAAAAGCCTCCACAAACATCAGATATAATCGTTCGGCCGACATTGAATTCTCGAGCAAATGACATCAAAAGTAATACCAAATGCAAGAAAATTCAACCATTGTCAAGCAATCTTGTCAACAACATCAATGTTGTTTCAAATGTTGAGACAGAGTCTTCTCCTCTGTCCAACAAAATTCTTCAGAAACAGAAACAGTCACAGGTATCTGAAACTCAAGAATCCAAACTCCAAAGGTACAAACCAGAATTTCAGTACATTGCAGAAATCATAAACAAACATGTCACAACAACAAAAACAGTGTCTTTTCACAAATTGTTCTCTTCAACACACTCAATTGACCCATCAATCTTCAACCTTCTCGAACACAATCCCGACGATAAAGATCGAAACTTTACCACTAAAAACCAACTGGGTCAACGTTGGAATCGAAAATTGATGTTTGATTTGGTGGATGAAGTTCTAATGGAGATTTTGAAGCCAAAGAGTAGTGAAAAAAAGCTATGTTTTTCAGATGGATTTTGCGACAATTGGACAGTTATGGAGTTAACAGAGAAAGTTTGGAAAAGGGTTAGGGAATTTCCATGTGCAAAGTGTGAAGTTTTGGATGATATTGATAATTTGATTGAATCAGAAGATATGGAGAAAGTGATCAAGGTTGAAGGTGAAGATGAAACAAAAGGGTTGGTGAGAGAGATTGAGGGGAACATATTAAACACATTGGTGCATGAAACTATTTTGGTTATGTGTATGATTGAATGA 1920 0.3484 MGKEWNWIGKSSKRSVIVEENHETKTTTPSGCMCAVFQFFDFHHFSNSINHQQQITFKSPSSTTLPKVSGGEAPRNSLESEDSSGSASLSKEEKFKIPNIQIKTKRSNGGILTDLSSEISTSSSPGTKTPTLVARLMGLDILPNSNSPSFSSPLSTLNSQGKNIIIQHLHQVRTKQQQFQTKSRNSIDGSETTRIPSSRKSDFDLHRLSLQINKENYSLGDEDFELPRLSFSKRKIDENSSKSSSHYAKQIVKQVKENVVSRKVGQDITNNLKNMQDINIKQNTRVTKKLPSNDQLQGREEFLGQLRVKKCPKTTSFKDSNPNSSSSPRSRLIDNKHKPNTTTKTTSKDKNTKPKASALKQEQESKDKKLVASNCKKATNEKFSSRFKKPPQTSDIIVRPTLNSRANDIKSNTKCKKIQPLSSNLVNNINVVSNVETESSPLSNKILQKQKQSQVSETQESKLQRYKPEFQYIAEIINKHVTTTKTVSFHKLFSSTHSIDPSIFNLLEHNPDDKDRNFTTKNQLGQRWNRKLMFDLVDEVLMEILKPKSSEKKLCFSDGFCDNWTVMELTEKVWKRVREFPCAKCEVLDDIDNLIESEDMEKVIKVEGEDETKGLVREIEGNILNTLVHETILVMCMIE 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05584 639 MobiDBLite consensus disorder prediction 58 92 - -
Vivi2g05584 639 MobiDBLite consensus disorder prediction 311 373 - -
Vivi2g05584 639 Pfam DUF761-associated sequence motif 122 147 IPR032795 -
Vivi2g05584 639 MobiDBLite consensus disorder prediction 315 330 - -
Vivi2g05584 639 MobiDBLite consensus disorder prediction 331 373 - -
Vivi2g05584 639 MobiDBLite consensus disorder prediction 58 85 - -
Vivi2g05584 639 MobiDBLite consensus disorder prediction 175 199 - -
Vivi2g05584 639 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 637 - -
Vivi2g05584 639 MobiDBLite consensus disorder prediction 437 460 - -
Vivi2g05584 639 MobiDBLite consensus disorder prediction 175 194 - -
Vivi2g05584 639 Pfam Domain of unknown function (DUF4378) 469 630 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05584 Vivi-Chr2 183205978 183209579 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05584 99 631 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 31.443 2.87e-42 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05584 - - psat:127130446 981.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g05584 2 183205978 183209579 Vivi2g05584 2 183205978 183209579 ECH
Vivi2g05584 2 183205978 183209579 Vivi1g04298 1 91560675 91563285 PCT