Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05507 ATGGCACCTTCTCGGGTGGCAGGAGGTTTAGCCCAATCATCATCAAGTTCTGGAATTTTCTTTCAAGGAGAGGGACAGTCGCATAATTTAGTTAACTCTCACTTGAGTTCATCTTTAGTTAACTCGTCTAATACTGTACCTGGAACTGGTCACTCCAACCTTGGTCCAGTTCCTGGGGATATGAATAATGCAATTTTGAACAGTGTTGCAAACTCAGCACCAAGTGTTGGAGCCAGTTCTCTAGTCACGGATGCGAATTCTGCACTCTCGGGTGACCGCCATATGCAAAGAAGTGCAAGCATTAATGGAGACTCGTACTTAAGATTACCTGCCTCGCCTTTGTCATTCACATCGAATAATATTAGTATTTCTGGGTCACCTGCAATGGATGGTTCATCTGTTGTACAGCAGAATTCTCATCAAGATCAGAATGCTCAACAATTGCAGCAGAATCAGCAGAAGCTTCAGGGTGGTTCAAGTTCTATGCATATGCCTGCTTCTCAAACTGGATCGTCTTCGCACCAAATGGGTGCACAAGTGGCAGGATCTTTCATTCAAGATCCAAATAGTATATCTCACTTGCTGAAAAAACGTAGGCTGGATATCAAACCAGATGATATAATGCAACAACAGGTAATACAGCAGCTTCTTCAGAGACAAGACCCCACACAATTCCAAGGACGGAATCCACAGTTACAGGCTATGTTTCAGCAACAGCATAGACTTAAGCAACAACAAATCTTTCAGTCATTGCCACAGGCCCAGCGGATGCAATTGATACAACAACAGCAGCAACAGCAACAACAGCAGCAGCAACAAATGCAGAGGCAGCAAATACAACAACAAATGATGCAGCCCTCGGCTGGTGTGAAGCGGCCATATGATGGTGGTGTTGGAGGCGTATGTTCCCGTCGATTGATGCAGTACCTCTATCATCAAAGACAGCGACCAAGTGATAATAGTATTGCGTATTGGAGAAAATTCGTGGCTGAATATTATTCTCCTCGTGCAAAGCAACGGTGGTGCTTGGCATTATATAGTAACCCTGGACACCATACAGCTGGTGTTTTACCGCAAGCAACTACACATGCTTGGCACTGTGACATATGTGGAGCTAAATCTGGAAGAAGGGGATTTGAGGCAACTTTTGATATACTACCCAGACTTAACGTAGTCAAATTTGATGGTGGAGTGATCGATGAACTTTTGTTTTTGGACTTGCCACGCGAAATAAGATTTGCGTCTGGTTTGATGATGTTAGAATATACAAAAGCAGTTCAAGAGTGTGTGTATGAGCAGCTTCGTGTTGTTCGTGAGGGTCAACTTCGTATTGTATTTACTCAAGACCTAAAGATATTTTCTTGGGATTTCTGTGTAAGACGCCACGAAGAACTTCTCCCTCGAAAGTTAGTTGCCCCACAGGTCAACCAATTAGTTCAGGTGGCTCAAAAATGCCAAAGTACAATTTCTGAAAGTGGGTCAGACGGGGTATCTCAGCATGACTTGCAATCAAACAGCAACATGGTCCTAACTGCTGGGCGCCAGCTTGCGAAGAGTTTGGAGCTACAATCACTAAATGACTTGGGCTTTTCAAAAAGATTTGTGAGAACTTTACAGATTTCTGAGGTTTGCAATAACATGAAAGATCTAATTGATATCAGTTCTGATCAAGATATCGGAGCAATTGAGAGTTTGAAAAATTATTCGCAATTTTCAACCGCGTCAAAGCACCAAATGCAAAAGATGCAGGAGATGGAACAGGCAGCAAATGCTCAAGGTCTCCCATCTGATCGAAATACACTTAATAAACTGATGGCATTGAATCCTGGATCAAACAATCATATAACCAATAATCACAACAATATGGGCAATCGCGGTGCTTTGACTGGGCCATCACAAGCTGCTTTGGCAATGTCCAGTTATCAGAATATTCTCATGAGGCAAAACTCGATGAATTCAAGTCCTAGCTCACTTCATCGAGAAGGGTCCCCTTTCAATAACCCGAACCAAAGTCCCTCGTCAGCTTCTTTGCAAGGTGCTGGTGCTGCTGCTATAATCCCCGGCTCTATGCAGAATTCACCTCACAACAGTAGTGGTGGTTTCTCAAATCAGCATATATCCGCACAACAACAACAGCAGCGGCAACAGCAACAGCAACAACACCTTCAACAGCGCTCGTTAAGTGCGAATAATTTACCTCAACAAAATCACTCACAAGGACCTCAAGGAAATCAATCACTGCAACAGCAGATGATCCAGCAACTACTACAAGATATGTCAAATAACAACGGCGGGGGAGTGCAACAACAGTCTCATAGTGGACCCAATGTAAGTGGGAATATGGCAAAGAATAATAATTTGGGTTTTGCGGGACAAACTCCACCCACAACCGGAGGAGGCGGCGGCGGCTCTACCAGCGGTCCAGCAAATAACGGACCTGTTTCAAGGAGTAATAGCTTCAAAGCAGCTTCAAACAGTGATTCTTCTGCAGCAGCTGGTGGAGGAAGCAACACAGGATTCAACCAGAGATCATCTGACATGCCCCCGCAGAATCTTGCATTGCAAGACATAGCTTCCGATTTCGCCAATGATTTTGCTGATAACCCCTTCTTTAACAGTGATCTAGACGATAACCTGGGTTTTAACTGGAAGACATGA 2658 0.4398 MAPSRVAGGLAQSSSSSGIFFQGEGQSHNLVNSHLSSSLVNSSNTVPGTGHSNLGPVPGDMNNAILNSVANSAPSVGASSLVTDANSALSGDRHMQRSASINGDSYLRLPASPLSFTSNNISISGSPAMDGSSVVQQNSHQDQNAQQLQQNQQKLQGGSSSMHMPASQTGSSSHQMGAQVAGSFIQDPNSISHLLKKRRLDIKPDDIMQQQVIQQLLQRQDPTQFQGRNPQLQAMFQQQHRLKQQQIFQSLPQAQRMQLIQQQQQQQQQQQQQMQRQQIQQQMMQPSAGVKRPYDGGVGGVCSRRLMQYLYHQRQRPSDNSIAYWRKFVAEYYSPRAKQRWCLALYSNPGHHTAGVLPQATTHAWHCDICGAKSGRRGFEATFDILPRLNVVKFDGGVIDELLFLDLPREIRFASGLMMLEYTKAVQECVYEQLRVVREGQLRIVFTQDLKIFSWDFCVRRHEELLPRKLVAPQVNQLVQVAQKCQSTISESGSDGVSQHDLQSNSNMVLTAGRQLAKSLELQSLNDLGFSKRFVRTLQISEVCNNMKDLIDISSDQDIGAIESLKNYSQFSTASKHQMQKMQEMEQAANAQGLPSDRNTLNKLMALNPGSNNHITNNHNNMGNRGALTGPSQAALAMSSYQNILMRQNSMNSSPSSLHREGSPFNNPNQSPSSASLQGAGAAAIIPGSMQNSPHNSSGGFSNQHISAQQQQQRQQQQQQHLQQRSLSANNLPQQNHSQGPQGNQSLQQQMIQQLLQDMSNNNGGGVQQQSHSGPNVSGNMAKNNNLGFAGQTPPTTGGGGGGSTSGPANNGPVSRSNSFKAASNSDSSAAAGGGSNTGFNQRSSDMPPQNLALQDIASDFANDFADNPFFNSDLDDNLGFNWKT 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05507 885 MobiDBLite consensus disorder prediction 689 726 - -
Vivi2g05507 885 PANTHER LIM DOMAIN-BINDING PROTEIN 41 849 IPR029005 -
Vivi2g05507 885 MobiDBLite consensus disorder prediction 38 59 - -
Vivi2g05507 885 Pfam LIM-domain binding protein 305 566 IPR029005 -
Vivi2g05507 885 MobiDBLite consensus disorder prediction 759 850 - -
Vivi2g05507 885 MobiDBLite consensus disorder prediction 608 630 - -
Vivi2g05507 885 MobiDBLite consensus disorder prediction 650 678 - -
Vivi2g05507 885 MobiDBLite consensus disorder prediction 650 726 - -
Vivi2g05507 885 Coils Coil 257 282 - -
Vivi2g05507 885 MobiDBLite consensus disorder prediction 122 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05507 Vivi-Chr2 180758337 180763873 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05507 290 568 C2H2 Transcription Factor Family AT1G43850 54.480 1.28e-98 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05507 - - gmx:100816886 1055.05