Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05495 ATGGATCCCAATAATCATTTTAACACTCAAAATTCTGCTAATTTTCCATTTAACCAAAATCCCAACAATTTTCAAAATCCCAACAATTATCAAAATCCCAACTATTATCAAAATCCAAATCAATTTTCCAACCAACATCCTCAAAACATACCTAGTTTTGGTTTTCCACCAAATTTCAACCAGTCATCCTCTGTTCCAAACTTTCAACCATATTATGGATCTATGCCGAGAAATCCATCTCAAACACCCCCGTTTAATGGTTATGTGACAATGGCGAATGCAAATTTTCCAAGTGGTGGTGTACCTGAATTTCCCGAGTTTTCAACACAACTAACTATTGGTGGCATGATAGTTTCTAATGAAGTCGCTCCAAATTCAGAGGATTCAACTCCTAAGAGCAGGAAAACTCAGCAACCAGCATGGAACACTGAACAAAATTTGGTGCTAATTAGTGGGTGGATTAAATTTGGAACAAGCAGTGTTGTCGGAAGAAACCAGAAAGGTGAAACATATTGGGGTAAAACTGCTGAGTATTGTAATGAGCATTGCTCATTCGATCCTCCGCGTGATGGACCTGCATGCCGAAACCGTTTTAATTATATGAACAAAGTGTTGGGTAAATGGATTGGCGCTTATGATGGCGCTAAGCGTATGCAAGGAAGTGGTTGGTCGGAGAATGATGTTTTGGCAAAAGCGCAGGAATTATATGCATGTGGGAAGAATGTTAGATTCACTTTAATGGAAGAATGGCACGCTCTCCGTGATCAACCACATTATGTTAGTCAAGTAGGAGTAAATATTGGCTCAGGAAGTAGTGGATCTAAGAGATCTCGCGAGATTGCATCTCATGACCTATGGATCTGGCATGGAAAGGTTCCAAGTGTGAATTTCTTTGTGAATCAACGTCCATATAATATGGCATACTATCTAGCTGATGGTATCTACCCTTCTTATCCAACTTTCGTCAAATCGATTAGACTTCCTCAAAGTGAACCCGATAAATTATTTGCAAAATTTCAGGAGGGTTACAGGAAGGACATCGAACGTGCATTTGGAATGCTCCAAGCTCGATTTAAAATCATCCGTGAACCAGCTCGCTTGTGGGACATAGCTGATTTGGGTATCATCATGAGGTCATGCATCATATTACATAATATGATTGTTGAGGATGAACGAGATTCATATTCTCAACGTTGGACCGATTTTGAGCAATCTGGGGAAAGTGGATCTACTGCACCACAACCATACTCGACCGAGGTGTTACCCGCTTTTGCAAATCATGTGCGTGCTAGATCAGAGTTCCGTGATCCAAATGTTCATCAAGAATTGCAAGCCGATCTAGTGAAGCACATATGGACAAAGTTTGGAATGTTCCGTGATTGA 1383 0.4027 MDPNNHFNTQNSANFPFNQNPNNFQNPNNYQNPNYYQNPNQFSNQHPQNIPSFGFPPNFNQSSSVPNFQPYYGSMPRNPSQTPPFNGYVTMANANFPSGGVPEFPEFSTQLTIGGMIVSNEVAPNSEDSTPKSRKTQQPAWNTEQNLVLISGWIKFGTSSVVGRNQKGETYWGKTAEYCNEHCSFDPPRDGPACRNRFNYMNKVLGKWIGAYDGAKRMQGSGWSENDVLAKAQELYACGKNVRFTLMEEWHALRDQPHYVSQVGVNIGSGSSGSKRSREIASHDLWIWHGKVPSVNFFVNQRPYNMAYYLADGIYPSYPTFVKSIRLPQSEPDKLFAKFQEGYRKDIERAFGMLQARFKIIREPARLWDIADLGIIMRSCIILHNMIVEDERDSYSQRWTDFEQSGESGSTAPQPYSTEVLPAFANHVRARSEFRDPNVHQELQADLVKHIWTKFGMFRD 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05495 460 MobiDBLite consensus disorder prediction 122 141 - -
Vivi2g05495 460 MobiDBLite consensus disorder prediction 1 29 - -
Vivi2g05495 460 Coils Coil 458 460 - -
Vivi2g05495 460 MobiDBLite consensus disorder prediction 121 141 - -
Vivi2g05495 460 PANTHER - 112 280 - -
Vivi2g05495 460 Pfam Plant transposon protein 288 394 IPR006912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05495 Vivi-Chr2 180642916 180665351 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05495 85 278 Glutathione S-transferase Gene Family AT5G41240 29.146 2.30e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05495 - - vvo:131653155 902.508