Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi2g05493 | ATGACAAATCAACGATCTTCCTTCAGCTACGACGTTTTCATAACCTTCTCCGGCGACGATACTCGTTACGGTTTCGCCGGCAATCTCTGGAAATCTCTCAGTAACAGAGGAATCCACACATTCATCGATGACCATGAAGAGGACCTTTCCAAAGGAAATGGGATCGAATCAACACTTTTGAATGTGATCAATGAGTCAAGAACTGCCATTATTGTGTTTTCTAACAATTATGCTTTTTCATCCTTTTGCTTGGAACTTCTTGTCTATATCCTTGACAGTTTTCTCTTGAATCATCGGTTTATTTTCCCTGTTTTTTACGATGTCGATCCTGCTGTTGTAAGGTATCAAAGTGGAACTTATGGTGAAGCTTTTTCAAAGCATGAGAAGAAATTGAAAGATAACAAAGAGAAAGTTAAGAAATGGAGGAGAGCTTTATATCAAGTAGCTAACTTGTCTGGATTTCATTTCAAACATGGGGATGGATATGAATTTGAGTTTATTGAGAGGATTGTGGAAGAAGTCTCCAGTAAGTTTGATCTTGTTCCTGTACATATTGCTAATTACACGGTCGGATTGGAGTCTCAATTGGAAGAAGTGTGTTCACTTTTAGAGTTGGGATCAAAACAAGTCCTTACAGTGGGGATCTATGGGGTTGGCGGAATAGGTAAAACAGTACTTGCTCGAGCTGTTTATAATAAGATCGGAGACCAATTTGAAGCTTTATGTTTTCTTGCCAATGTTAGTGAGAATTCAAATTTGCATGGACTAGTGCACCTCCAGAATAGGCTTCTTTCAGAAATGGTTGGATTGAATGATATTCAGTCAGGAAGTGCTAGTAAAGGAGTTTCAGTAGTAAAGTATAGGCTCCGTCGAAAAAAAGTTCTTCTTATCCTTGATGATGTTGACACACTTGAGCAACTAGAGACCTTGGTTGGAGGACTTGATTGGTTTGGTCCTGGTAGCAGAGTTATCATTACAACACGGGACAAACATTTGCTAGCATTTCACGGGTTTGAAAGAATATATGAGGTACAAGAGTTGAATGATGTAGACGCTCTTGAGTTGCTTAGCCACAGGGTTTTTAAACAAGGCGTCGTTGATCCCAATTACACAGAACTTTTAAGCCGAGTAGTAACTTACGCTTCCGGGATTCCATTGGCTTTGGAAGTAATAGGTTCCAACTTGTTTGGAAAAAGTGTTGACCAATGGAAACATACATTAGATCGGTTTGAACGAAATCCTCCCAACGAAATCCGTAATATTCTTAGAATAAGCTTTGATGATTTGGATCAAGAGGAGAAGAACGTTTTTCTAGATATCACTTGTTGCTTCAAAGGATATGAATTGACAGATGTTGAAGATATTCTCCATGCTCGTTATGGTCAAGACATGAAATATCATATTGAAGCGTTGATTGACAAGTCTCTCATACGTATCAGTTTGGATGGTAAGGTGACACCACATCCCTTGATAGAGAGAACAGGTAAAGAAATTGTCCATGACGAATCACCAAGCGATCCTGGGAGACGTAGTAGATTATGGTTCCGAGAAGATATAGTTCAAGTCCTAAAAAATAATAAGGGAACTAGTAATATTGAAATCATACATCTAGATTCCCTCTTAATTGAAAATGAAGAAGCAATAGAATGGGATGGAGAGGCCTTTGAGGAGATGCCAAACCTCAGAATACTTATTATTAGAAAATGTCATTTCTCCAAAGCTCCCAAGTATCTTCCAAACAGTTTAAAGGTATTGGAATGGTGGAGATATCCTTCTGAGGAGTTACCATCTGATTTTGATTCAAAGAAACTTGTTATATGCAAGCTACCAAACATGGCTTCATGTCATCCGATCTAA | 1857 | 0.385 | MTNQRSSFSYDVFITFSGDDTRYGFAGNLWKSLSNRGIHTFIDDHEEDLSKGNGIESTLLNVINESRTAIIVFSNNYAFSSFCLELLVYILDSFLLNHRFIFPVFYDVDPAVVRYQSGTYGEAFSKHEKKLKDNKEKVKKWRRALYQVANLSGFHFKHGDGYEFEFIERIVEEVSSKFDLVPVHIANYTVGLESQLEEVCSLLELGSKQVLTVGIYGVGGIGKTVLARAVYNKIGDQFEALCFLANVSENSNLHGLVHLQNRLLSEMVGLNDIQSGSASKGVSVVKYRLRRKKVLLILDDVDTLEQLETLVGGLDWFGPGSRVIITTRDKHLLAFHGFERIYEVQELNDVDALELLSHRVFKQGVVDPNYTELLSRVVTYASGIPLALEVIGSNLFGKSVDQWKHTLDRFERNPPNEIRNILRISFDDLDQEEKNVFLDITCCFKGYELTDVEDILHARYGQDMKYHIEALIDKSLIRISLDGKVTPHPLIERTGKEIVHDESPSDPGRRSRLWFREDIVQVLKNNKGTSNIEIIHLDSLLIENEEAIEWDGEAFEEMPNLRILIIRKCHFSKAPKYLPNSLKVLEWWRYPSEELPSDFDSKKLVICKLPNMASCHPI | 618 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi2g05493 | 618 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 5 | 154 | IPR035897 | - | |
Vivi2g05493 | 618 | Gene3D | - | 4 | 181 | IPR035897 | - | |
Vivi2g05493 | 618 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 10 | 611 | IPR044974 | GO:0006952 | |
Vivi2g05493 | 618 | Gene3D | - | 182 | 338 | IPR027417 | - | |
Vivi2g05493 | 618 | Gene3D | Ribonuclease Inhibitor | 512 | 615 | IPR032675 | - | |
Vivi2g05493 | 618 | Coils | Coil | 124 | 144 | - | - | |
Vivi2g05493 | 618 | Pfam | NB-ARC domain | 195 | 424 | IPR002182 | GO:0043531 | |
Vivi2g05493 | 618 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 179 | 440 | IPR027417 | - | |
Vivi2g05493 | 618 | Pfam | TIR domain | 10 | 177 | IPR000157 | GO:0007165 | |
Vivi2g05493 | 618 | SMART | AAA_5 | 209 | 347 | IPR003593 | GO:0016887 | |
Vivi2g05493 | 618 | SMART | till_3 | 9 | 151 | IPR000157 | GO:0007165 | |
Vivi2g05493 | 618 | SUPERFAMILY | "Winged helix" DNA-binding domain | 416 | 524 | IPR036390 | - | |
Vivi2g05493 | 618 | Gene3D | - | 346 | 430 | IPR042197 | - | |
Vivi2g05493 | 618 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 6 | 180 | - | - | |
Vivi2g05493 | 618 | ProSiteProfiles | TIR domain profile. | 8 | 178 | IPR000157 | GO:0007165 | |
Vivi2g05493 | 618 | PRINTS | Disease resistance protein signature | 556 | 572 | - | - | |
Vivi2g05493 | 618 | PRINTS | Disease resistance protein signature | 381 | 395 | - | - | |
Vivi2g05493 | 618 | PRINTS | Disease resistance protein signature | 212 | 227 | - | - | |
Vivi2g05493 | 618 | PRINTS | Disease resistance protein signature | 288 | 302 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi2g05493 | Vivi-Chr2 | 180639671 | 180642377 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi2g05493 | 6 | 615 | WRKY Transcription Factor Family | AT4G12020 | 31.270 | 3.35e-70 | 246 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi2g05493 | - | - | psat:127132333 | 1083.94 |