Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05393 ATGGCATCAACCCAATCCGGCTTCACGGAAACCATTCAGGGTCCAAAGGTTCGGGTAGTGGCAAAAATTCGTGGGTTTTCGGATCCAGATACCAATTTCGAAACCTCCAGGAGTGTGGAATGGGTTTCAGTGAACACGGAAAATTCTGGGGAAGTTACCATCTCCTTTAAAGAACAATCCTCTAGCCGGTATTCAGTTGACTACTGCTACAACGAACATGAAGATAATGAAGTAATCTATTCAAAGGAGGTGAAACCTCTTGTTTCGGCTGCTTTTGAAGGTATTAATAGCACAATTATTGCTCATGGAGCTAGAGGAAGTGGCAAAACTCAATTAATTCAGGGCTCTTTGGAGAAATCGGGTTTGGCAATGCTGGCTATTTCGGAGTTTCTCTCTATGGCTGAGAAAAATGGGAAATCTATAGCAGTTTCTTTCTATGATGTTGATCATCAAGACCATGCTGCTGATTTATTAAATCCAGAACAATCACCAATTTTGGTGCTTGAAGATCACGGAAGAATTCAGTTTAAAGGACTTACTCAAACTCCTGTGAAATCCATTGCTGAGTTTCAGAATTTATACATCACAGCATGTTCTGCGCAAACGTCTGCACCCAAGAAAGGATTTGAGGCTGCACCCAAAAAAGGACTTGAGCCTGCTCGGAGAAGCCACTTGGGATTAATTGTTCATGTCTTTGAACATAATGAAAGTGCAAATGGTCTTGTGAGCAAAATGAATTTTGTTGATATGGCAGGTTATGAAGATCCTAGAAGGAAAAGTGGCGATGCTTCAGGTGTTGCTGAGAATAACAAAATTAACAAGTCAATTTATGCCTTACTGAATGTTTGTCATGCTTTGAGCGCAAATGAAAGTCGTGTCCCCTTTCGGGAAAGTAAACTCACACGCATGTTGCAGGACTCCTTGAGGGGAACTAGCAAAGTTTTGCTGGTTTCGTGCTTGAACCCATCATTTTGCCAAGACACTGTTTACATGCTTAGCTTAGCATCACGGTCATGTCAAAGGTCTCATCAAACGCCCTTTGGTTCAACGATGAAAACTGCTAGTTCAACCAGACAGACAGTGAACTTAGAGTCCACAAAGAAAATTGCAAGTTCAGCAAGACAAACAGTTACCTTAGATTCCTCAAAGAAAATTGCAAGTTCAGCAAGACAAACAGTTACTTTAGATTCCTCAAAGAAAAGTGCGAGTTCAGTAAGACAGCCAGTTACCTTAGATTCCACAAAGAAAAGTGCAAGTTCTGTAAGACAGACAGTAACCTTAGATTCTACAAGGAAAAGTGCTAGTTCTGTAAGGCAGTCAAAAACCTTAGATTCAACAAGGAAAAGTGAAAATTCAGTAAGGCAGTCAAAAACCTTGGATTCAACAAGGAAAAGTGAAAATTCAGTAAGGCAGACAAAAACCTTAGATTCAACAAGGAAAAGTGAAAATTCAGAGACAAAAACCTTAGATTCCACAAAGAAAAGTGCAAGTTCAGCAAGACAGACAGTGGCCTCAGTTTCCGCGAAGAAAAGTGCAAGTTCAGCAATGCAGTTTGTGACTGTTCGTAAAAACAAGATACCCAAAAGTGTTTCTGCATCAACAAAAGAATTACCAGGTTCCATATCTCATACATATGATGAAGAAACATGTGTTGTTGCTATGAAGTCTGAAATACAAGGAAGGAAATTGTTTGATGAAGTCAGCCACTCTGCTGCTAAAGCCGAGAAGGAAATTACCATTGCTGATGTAACCAACACATCACAGCCTTTACTGGACAATTCATTATCAGAAGATGTATATCATGTTGAACTAAACTCTAGAGTTGAAAAGGTTGACTCATCTTTGAATGCTAGCAGTAAAGTGGAACTTGATCCCAAAGTGGAAAAGGGTACTTATTTTGAGGATAAAGAGGAGACGAATTATATCATTAATTACTCCAAAGATTTGTCAATGGCTAACGAAGGTCATAACATGAACAAGGAGAACAACAACTTAATGGAAAATGAAGATTGTTCACCACCCATTAGTTCTCAATTGCGTGAACTTCAATCTCTCGTTTCATCAACTCCATTATGCATGCAGTTACCAGAGGAGAAATTCATTTCACTTGATGAAAATCAGATTTCTACTAAAACGGCAGAACCAAAAACTTCTGATACTGAAAACCTAGATGTAATGAATAATAAAAGTTTTTGGGAAACATTCAGCATGCATGGTTATGGAATGAAGAATTCTACTGAAGTTACAGAGCCAAAAACTCTTGATATTGAAATAGGAGATGTAATGAATGCCAAAAGTCCTTGGGAAACATTCAACATGCATGGTTCTGGAATGAAGAATTCTACTGAAGTTACAGAAGAACCAAGAACTCCTGATATTGACATACGAGATGTAATGAATACCAAAAGTCATTGGGAAACATTTAACTTGCATGGTTCTGGATTCAAGAATTCTACTGAAGTTACAGAACCAAGAACTCCTGATATTGACATACGAGATGCAATGAATACCAAAAGTCCTTGGGAAACATTTATGTTGCATGGTTCTGGAAGGAAGAATTCTACTAAAGTTACAGAACCAAGAACTCCTGATGTTGACATACGAGATGTAATGAATACCAAAAGTCCTTGGGAAACATTTAACTTGCATGGTTCTGGAATGAAGAATTCTCTTGTTAAAGACTACCTTAGAATTTTAAACACAGCGGAAAAGGATGAATTAAAGAAGTTAAAGGGAATTGGAGAGAAGAGAGCAAACTATATACTCGAGCTTCGTGAAGAATCTCCAGAACCTTTCAAGAGTCTTGATGATCTGAAGGATATTGGACTTTCCGAAAAACAGATTAAGGGAATGATGAAGAAGGAAGTTGGAGAGCTTTTCAATTAG 2886 0.3846 MASTQSGFTETIQGPKVRVVAKIRGFSDPDTNFETSRSVEWVSVNTENSGEVTISFKEQSSSRYSVDYCYNEHEDNEVIYSKEVKPLVSAAFEGINSTIIAHGARGSGKTQLIQGSLEKSGLAMLAISEFLSMAEKNGKSIAVSFYDVDHQDHAADLLNPEQSPILVLEDHGRIQFKGLTQTPVKSIAEFQNLYITACSAQTSAPKKGFEAAPKKGLEPARRSHLGLIVHVFEHNESANGLVSKMNFVDMAGYEDPRRKSGDASGVAENNKINKSIYALLNVCHALSANESRVPFRESKLTRMLQDSLRGTSKVLLVSCLNPSFCQDTVYMLSLASRSCQRSHQTPFGSTMKTASSTRQTVNLESTKKIASSARQTVTLDSSKKIASSARQTVTLDSSKKSASSVRQPVTLDSTKKSASSVRQTVTLDSTRKSASSVRQSKTLDSTRKSENSVRQSKTLDSTRKSENSVRQTKTLDSTRKSENSETKTLDSTKKSASSARQTVASVSAKKSASSAMQFVTVRKNKIPKSVSASTKELPGSISHTYDEETCVVAMKSEIQGRKLFDEVSHSAAKAEKEITIADVTNTSQPLLDNSLSEDVYHVELNSRVEKVDSSLNASSKVELDPKVEKGTYFEDKEETNYIINYSKDLSMANEGHNMNKENNNLMENEDCSPPISSQLRELQSLVSSTPLCMQLPEEKFISLDENQISTKTAEPKTSDTENLDVMNNKSFWETFSMHGYGMKNSTEVTEPKTLDIEIGDVMNAKSPWETFNMHGSGMKNSTEVTEEPRTPDIDIRDVMNTKSHWETFNLHGSGFKNSTEVTEPRTPDIDIRDAMNTKSPWETFMLHGSGRKNSTKVTEPRTPDVDIRDVMNTKSPWETFNLHGSGMKNSLVKDYLRILNTAEKDELKKLKGIGEKRANYILELREESPEPFKSLDDLKDIGLSEKQIKGMMKKEVGELFN 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05393 961 FunFam Kinesin-like protein KIN-10C 885 959 - -
Vivi2g05393 961 Gene3D Kinesin motor domain 4 340 IPR036961 -
Vivi2g05393 961 PRINTS Kinesin heavy chain signature 94 115 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi2g05393 961 PRINTS Kinesin heavy chain signature 244 262 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi2g05393 961 PRINTS Kinesin heavy chain signature 293 314 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi2g05393 961 MobiDBLite consensus disorder prediction 383 500 - -
Vivi2g05393 961 MobiDBLite consensus disorder prediction 443 489 - -
Vivi2g05393 961 Gene3D - 887 959 - -
Vivi2g05393 961 Pfam Helix-hairpin-helix motif 899 947 - -
Vivi2g05393 961 ProSiteProfiles Kinesin motor domain profile. 16 341 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi2g05393 961 SUPERFAMILY RuvA domain 2-like 896 954 IPR010994 -
Vivi2g05393 961 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 352 IPR027417 -
Vivi2g05393 961 SMART kinesin_4 14 344 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi2g05393 961 PANTHER KINESIN-RELATED 53 644 IPR027640 GO:0003777|GO:0007018
Vivi2g05393 961 Pfam Kinesin motor domain 24 337 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi2g05393 961 MobiDBLite consensus disorder prediction 342 361 - -
Vivi2g05393 961 MobiDBLite consensus disorder prediction 383 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05393 Vivi-Chr2 178862110 178868646 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g05393 10 323 Calmodulin-binding Proteins AT5G65930 28.354 1.16e-22 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05393 K10403 - gmx:100809612 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g05393 2 178862110 178868646 Vivi2g05393 2 178862110 178868646 ECH